RNA–Protein interactions for RNA: ENST00000399451.6

ANKRD28-201, Transcript of ankyrin repeat domain 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ANKRD28, Length 6,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-201ENST00000399451 DCAF8L2P0C7V8 631 aa37.4■■■■□ 3.58
ANKRD28-201ENST00000399451 SUPT5HO00267 1087 aaKnown RBP34.97■■■■□ 3.19
ANKRD28-201ENST00000399451 NISCHQ9Y2I1 1504 aa34.76■■■■□ 3.16
ANKRD28-201ENST00000399451 SHROOM4Q9ULL8 1493 aa34.28■■■■□ 3.08
ANKRD28-201ENST00000399451 EHMT2Q96KQ7 1210 aa34.21■■■■□ 3.07
ANKRD28-201ENST00000399451 PELP1Q8IZL8 1130 aaKnown RBP33.85■■■■□ 3.01
ANKRD28-201ENST00000399451 APLP2Q06481 763 aa33.63■■■□□ 2.97
ANKRD28-201ENST00000399451 FAM9AQ8IZU1 332 aaPredicted RBP33.56■■■□□ 2.96
ANKRD28-201ENST00000399451 TTBK1Q5TCY1 1321 aaPredicted RBP32.99■■■□□ 2.87
ANKRD28-201ENST00000399451 PCGF6Q9BYE7 350 aa32.98■■■□□ 2.87
ANKRD28-201ENST00000399451 RANGAP1P46060 587 aaPredicted RBP32.85■■■□□ 2.85
ANKRD28-201ENST00000399451 ATP1B4Q9UN42 357 aaPredicted RBP32.74■■■□□ 2.83
ANKRD28-201ENST00000399451 ZEB1P37275 1124 aaPredicted RBP32.65■■■□□ 2.82
ANKRD28-201ENST00000399451 CENPBP07199 599 aaPredicted RBP32.64■■■□□ 2.82
ANKRD28-201ENST00000399451 ERICH6Q7L0X2 663 aa32.45■■■□□ 2.78
ANKRD28-201ENST00000399451 CCER1Q8TC90 406 aaPredicted RBP32.44■■■□□ 2.78
ANKRD28-201ENST00000399451 TRIM41Q8WV44 630 aa32.42■■■□□ 2.78
ANKRD28-201ENST00000399451 UBTFP17480 764 aaKnown RBP32.13■■■□□ 2.73
ANKRD28-201ENST00000399451 NEFLP07196 543 aa31.91■■■□□ 2.7
ANKRD28-201ENST00000399451 MYT1LQ9UL68 1186 aa31.85■■■□□ 2.69
ANKRD28-201ENST00000399451 YTHDC1Q96MU7 727 aaKnown RBP31.85■■■□□ 2.69
ANKRD28-201ENST00000399451 MYT1Q01538 1121 aa31.71■■■□□ 2.67
ANKRD28-201ENST00000399451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.61■■■□□ 2.65
ANKRD28-201ENST00000399451 HNRNPUL2Q1KMD3 747 aaKnown RBP31.61■■■□□ 2.65
ANKRD28-201ENST00000399451 TRIM26Q12899 539 aaPredicted RBP31.61■■■□□ 2.65
ANKRD28-201ENST00000399451 PPARGC1BQ86YN6 1023 aaKnown RBP31.57■■■□□ 2.64
ANKRD28-201ENST00000399451 HRCP23327 699 aa31.35■■■□□ 2.61
ANKRD28-201ENST00000399451 CHIC1Q5VXU3 224 aa31.28■■■□□ 2.6
ANKRD28-201ENST00000399451 POLR3GLQ9BT43 218 aa31.28■■■□□ 2.6
ANKRD28-201ENST00000399451 ITGAEP38570 1179 aa31.24■■■□□ 2.59
ANKRD28-201ENST00000399451 LOC105371045A0A1W2PR82 267 aa31.02■■■□□ 2.56
ANKRD28-201ENST00000399451 DAXXQ9UER7 740 aaPredicted RBP31■■■□□ 2.55
ANKRD28-201ENST00000399451 SLC4A1APQ9BWU0 796 aaKnown RBP30.98■■■□□ 2.55
ANKRD28-201ENST00000399451 CNGB1Q14028 1251 aaPredicted RBP30.9■■■□□ 2.54
ANKRD28-201ENST00000399451 DIEXFQ68CQ4 756 aaKnown RBP30.59■■■□□ 2.49
ANKRD28-201ENST00000399451 PABPN1Q86U42 306 aaKnown RBP eCLIP30.48■■■□□ 2.47
ANKRD28-201ENST00000399451 FAM50AQ14320 339 aaKnown RBP30.41■■■□□ 2.46
ANKRD28-201ENST00000399451 TRIM52Q96A61 297 aa30.36■■■□□ 2.45
ANKRD28-201ENST00000399451 ABCC9O60706 1549 aa30.35■■■□□ 2.45
ANKRD28-201ENST00000399451 FBLN2P98095 1184 aa30.35■■■□□ 2.45
ANKRD28-201ENST00000399451 RTL5Q5HYW3 569 aaPredicted RBP30.34■■■□□ 2.45
ANKRD28-201ENST00000399451 ZNF316A6NFI3 1004 aaPredicted RBP30.32■■■□□ 2.44
ANKRD28-201ENST00000399451 CLSPNQ9HAW4 1339 aa30.25■■■□□ 2.43
ANKRD28-201ENST00000399451 NEUROD1Q13562 356 aa30.12■■■□□ 2.41
ANKRD28-201ENST00000399451 BCANQ96GW7 911 aa30.1■■■□□ 2.41
ANKRD28-201ENST00000399451 ZNF326Q5BKZ1 582 aaKnown RBP30.04■■■□□ 2.4
ANKRD28-201ENST00000399451 GTF3C3Q9Y5Q9 886 aa30.03■■■□□ 2.4
ANKRD28-201ENST00000399451 SLC24A1O60721 1099 aa30.03■■■□□ 2.4
ANKRD28-201ENST00000399451 ANP32CO43423 234 aa29.99■■■□□ 2.39
ANKRD28-201ENST00000399451 ZBTB47Q9UFB7 747 aaPredicted RBP29.88■■■□□ 2.37
ANKRD28-201ENST00000399451 CDK11AQ9UQ88 783 aaPredicted RBP29.87■■■□□ 2.37
ANKRD28-201ENST00000399451 ARID3CA6NKF2 412 aa29.8■■■□□ 2.36
ANKRD28-201ENST00000399451 BCL11AQ9H165 835 aa29.71■■■□□ 2.35
ANKRD28-201ENST00000399451 ESF1Q9H501 851 aaKnown RBP29.7■■■□□ 2.35
ANKRD28-201ENST00000399451 NEFMP07197 916 aa29.69■■■□□ 2.34
ANKRD28-201ENST00000399451 P3H3Q8IVL6 736 aa29.66■■■□□ 2.34
ANKRD28-201ENST00000399451 PLPPR3Q6T4P5 718 aa29.64■■■□□ 2.33
ANKRD28-201ENST00000399451 ZNF777Q9ULD5 760 aaPredicted RBP29.62■■■□□ 2.33
ANKRD28-201ENST00000399451 CANXP27824 592 aaKnown RBP29.61■■■□□ 2.33
ANKRD28-201ENST00000399451 ACIN1Q9UKV3 1341 aaKnown RBP29.6■■■□□ 2.33
ANKRD28-201ENST00000399451 STAG3Q9UJ98 1225 aa29.47■■■□□ 2.31
ANKRD28-201ENST00000399451 CSRNP3Q8WYN3 585 aa29.45■■■□□ 2.3
ANKRD28-201ENST00000399451 NPM1P06748 294 aaKnown RBP eCLIP29.4■■■□□ 2.3
ANKRD28-201ENST00000399451 ANP32AP39687 249 aaKnown RBP29.39■■■□□ 2.3
ANKRD28-201ENST00000399451 CHGAP10645 457 aaKnown RBP29.39■■■□□ 2.29
ANKRD28-201ENST00000399451 NPM2Q86SE8 214 aaKnown RBP29.18■■■□□ 2.26
ANKRD28-201ENST00000399451 DCAF1Q9Y4B6 1507 aa29.16■■■□□ 2.26
ANKRD28-201ENST00000399451 FKBP8Q14318 412 aa29.15■■■□□ 2.26
ANKRD28-201ENST00000399451 TONSLQ96HA7 1378 aa29.14■■■□□ 2.26
ANKRD28-201ENST00000399451 SCAF1Q9H7N4 1312 aaKnown RBP29.02■■■□□ 2.24
ANKRD28-201ENST00000399451 HNRNPUQ00839 825 aaKnown RBP eCLIP29.01■■■□□ 2.23
ANKRD28-201ENST00000399451 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.98■■■□□ 2.23
ANKRD28-201ENST00000399451 SCRIBQ14160 1630 aa28.96■■■□□ 2.23
ANKRD28-201ENST00000399451 DDX10Q13206 875 aaKnown RBP28.95■■■□□ 2.22
ANKRD28-201ENST00000399451 FAM9BQ8IZU0 186 aa28.92■■■□□ 2.22
ANKRD28-201ENST00000399451 ANP32BQ92688 251 aaKnown RBP28.89■■■□□ 2.22
ANKRD28-201ENST00000399451 A0A0G2JS52 829 aa28.89■■■□□ 2.21
ANKRD28-201ENST00000399451 UPF2Q9HAU5 1272 aaKnown RBP28.87■■■□□ 2.21
ANKRD28-201ENST00000399451 HSP90AA1P07900 732 aaKnown RBP28.84■■■□□ 2.21
ANKRD28-201ENST00000399451 ZCCHC6Q5VYS8 1495 aaKnown RBP28.79■■■□□ 2.2
ANKRD28-201ENST00000399451 CHMP7Q8WUX9 453 aaPredicted RBP28.78■■■□□ 2.2
ANKRD28-201ENST00000399451 CHIC2Q9UKJ5 165 aa28.77■■■□□ 2.2
ANKRD28-201ENST00000399451 CCDC136Q96JN2 1154 aa28.74■■■□□ 2.19
ANKRD28-201ENST00000399451 TMC1Q8TDI8 760 aa28.73■■■□□ 2.19
ANKRD28-201ENST00000399451 ZBTB7CA1YPR0 619 aa28.72■■■□□ 2.19
ANKRD28-201ENST00000399451 SALL2Q9Y467 1007 aaPredicted RBP28.72■■■□□ 2.19
ANKRD28-201ENST00000399451 PLEKHG5O94827 1062 aa28.72■■■□□ 2.19
ANKRD28-201ENST00000399451 EIF5BO60841 1220 aaKnown RBP28.71■■■□□ 2.19
ANKRD28-201ENST00000399451 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.7■■■□□ 2.18
ANKRD28-201ENST00000399451 TSPY4P0CV99 314 aa28.68■■■□□ 2.18
ANKRD28-201ENST00000399451 TSPY10P0CW01 314 aa28.68■■■□□ 2.18
ANKRD28-201ENST00000399451 SENP3Q9H4L4 574 aaPredicted RBP28.66■■■□□ 2.18
ANKRD28-201ENST00000399451 C14orf37Q86TY3 774 aa28.64■■■□□ 2.17
ANKRD28-201ENST00000399451 KDM2AQ9Y2K7 1162 aa28.63■■■□□ 2.17
ANKRD28-201ENST00000399451 MRS2Q9HD23 443 aa28.62■■■□□ 2.17
ANKRD28-201ENST00000399451 WDR43Q15061 677 aaKnown RBP eCLIP28.62■■■□□ 2.17
ANKRD28-201ENST00000399451 PPP1R15AO75807 674 aaPredicted RBP28.59■■■□□ 2.17
ANKRD28-201ENST00000399451 NBR1Q14596 966 aa28.59■■■□□ 2.17
ANKRD28-201ENST00000399451 MIER1Q8N108 512 aa28.57■■■□□ 2.16
ANKRD28-201ENST00000399451 KCNH8Q96L42 1107 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms