RNA–Protein interactions for RNA: ENST00000610488.4

PPHLN1-223, Transcript of periphilin 1, humanhuman

TSL 5 BASIC

Gene PPHLN1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPHLN1-223ENST00000610488 NISCHQ9Y2I1 1504 aa32.87■■■□□ 2.85
PPHLN1-223ENST00000610488 CCDC180Q9P1Z9 1646 aa29.53■■■□□ 2.32
PPHLN1-223ENST00000610488 ABCC9O60706 1549 aa29.39■■■□□ 2.3
PPHLN1-223ENST00000610488 RB1CC1Q8TDY2 1594 aa28.03■■■□□ 2.08
PPHLN1-223ENST00000610488 NACADO15069 1562 aa27.82■■■□□ 2.04
PPHLN1-223ENST00000610488 DCAF8L2P0C7V8 631 aa27.75■■■□□ 2.03
PPHLN1-223ENST00000610488 UNC13AQ9UPW8 1703 aa27.51■■□□□ 1.99
PPHLN1-223ENST00000610488 MYO15BQ96JP2 1530 aa27.41■■□□□ 1.98
PPHLN1-223ENST00000610488 DNAJC5BQ9UF47 199 aa27.36■■□□□ 1.97
PPHLN1-223ENST00000610488 PABPN1Q86U42 306 aaKnown RBP eCLIP27.35■■□□□ 1.97
PPHLN1-223ENST00000610488 ZCCHC6Q5VYS8 1495 aaKnown RBP27.28■■□□□ 1.96
PPHLN1-223ENST00000610488 BICRAQ9NZM4 1560 aa27.18■■□□□ 1.94
PPHLN1-223ENST00000610488 DCAF1Q9Y4B6 1507 aa27.12■■□□□ 1.93
PPHLN1-223ENST00000610488 SCRIBQ14160 1630 aa26.96■■□□□ 1.91
PPHLN1-223ENST00000610488 SHROOM4Q9ULL8 1493 aa26.78■■□□□ 1.88
PPHLN1-223ENST00000610488 CC2D2AQ9P2K1 1620 aa26.58■■□□□ 1.85
PPHLN1-223ENST00000610488 EIF4G1Q04637 1599 aaKnown RBP26.53■■□□□ 1.84
PPHLN1-223ENST00000610488 CECR2Q9BXF3 1484 aa26.44■■□□□ 1.82
PPHLN1-223ENST00000610488 SMARCA4P51532 1647 aa25.68■■□□□ 1.7
PPHLN1-223ENST00000610488 NCAPD3P42695 1498 aa25.62■■□□□ 1.69
PPHLN1-223ENST00000610488 ATAD2BQ9ULI0 1458 aa25.61■■□□□ 1.69
PPHLN1-223ENST00000610488 SMARCA2P51531 1590 aa25.58■■□□□ 1.68
PPHLN1-223ENST00000610488 BAZ1AQ9NRL2 1556 aaPredicted RBP25.54■■□□□ 1.68
PPHLN1-223ENST00000610488 HMGXB3Q12766 1538 aa25.51■■□□□ 1.67
PPHLN1-223ENST00000610488 BAZ1BQ9UIG0 1483 aaKnown RBP25.42■■□□□ 1.66
PPHLN1-223ENST00000610488 ERCC6Q03468 1493 aa25.4■■□□□ 1.66
PPHLN1-223ENST00000610488 PEG3Q9GZU2 1588 aa25.36■■□□□ 1.65
PPHLN1-223ENST00000610488 MROH2BQ7Z745 1585 aa25.35■■□□□ 1.65
PPHLN1-223ENST00000610488 NESP48681 1621 aa25.28■■□□□ 1.64
PPHLN1-223ENST00000610488 CUX2O14529 1486 aa25.25■■□□□ 1.63
PPHLN1-223ENST00000610488 WIZO95785 1651 aa25.12■■□□□ 1.61
PPHLN1-223ENST00000610488 LAMC3Q9Y6N6 1575 aa25.12■■□□□ 1.61
PPHLN1-223ENST00000610488 KIF21AQ7Z4S6 1674 aa25.06■■□□□ 1.6
PPHLN1-223ENST00000610488 THOC2Q8NI27 1593 aaKnown RBP25.04■■□□□ 1.6
PPHLN1-223ENST00000610488 DNAJC5Q9H3Z4 198 aa25.03■■□□□ 1.6
PPHLN1-223ENST00000610488 PDS5BQ9NTI5 1447 aa24.93■■□□□ 1.58
PPHLN1-223ENST00000610488 CADPSQ9ULU8 1353 aa24.87■■□□□ 1.57
PPHLN1-223ENST00000610488 RSF1Q96T23 1441 aaPredicted RBP24.82■■□□□ 1.56
PPHLN1-223ENST00000610488 TOP2AP11388 1531 aaKnown RBP24.77■■□□□ 1.56
PPHLN1-223ENST00000610488 MRC2Q9UBG0 1479 aa24.74■■□□□ 1.55
PPHLN1-223ENST00000610488 CEP164Q9UPV0 1460 aa24.69■■□□□ 1.54
PPHLN1-223ENST00000610488 WDR62O43379 1518 aa24.67■■□□□ 1.54
PPHLN1-223ENST00000610488 FANCD2Q9BXW9 1451 aa24.64■■□□□ 1.54
PPHLN1-223ENST00000610488 CFTRP13569 1480 aa24.62■■□□□ 1.53
PPHLN1-223ENST00000610488 PRDM2Q13029 1718 aa24.58■■□□□ 1.52
PPHLN1-223ENST00000610488 CCDC88BA6NC98 1476 aa24.45■■□□□ 1.5
PPHLN1-223ENST00000610488 URB2Q14146 1524 aaKnown RBP24.44■■□□□ 1.5
PPHLN1-223ENST00000610488 TOPBP1Q92547 1522 aa24.19■■□□□ 1.46
PPHLN1-223ENST00000610488 IFT140Q96RY7 1462 aa24.15■■□□□ 1.46
PPHLN1-223ENST00000610488 DNMBPQ6XZF7 1577 aa24.14■■□□□ 1.45
PPHLN1-223ENST00000610488 ZNF608Q9ULD9 1512 aaPredicted RBP24.12■■□□□ 1.45
PPHLN1-223ENST00000610488 ABCC8Q09428 1581 aa24.11■■□□□ 1.45
PPHLN1-223ENST00000610488 TRIM41Q8WV44 630 aa24.11■■□□□ 1.45
PPHLN1-223ENST00000610488 OSCARQ8IYS5 282 aa24.08■■□□□ 1.45
PPHLN1-223ENST00000610488 EIF4G3O43432 1585 aaKnown RBP24.06■■□□□ 1.44
PPHLN1-223ENST00000610488 TARBP1Q13395 1621 aaKnown RBP23.98■■□□□ 1.43
PPHLN1-223ENST00000610488 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
PPHLN1-223ENST00000610488 CHD1O14646 1710 aa23.92■■□□□ 1.42
PPHLN1-223ENST00000610488 AQRO60306 1485 aaKnown RBP eCLIP23.9■■□□□ 1.42
PPHLN1-223ENST00000610488 SUPT5HO00267 1087 aaKnown RBP23.88■■□□□ 1.41
PPHLN1-223ENST00000610488 RIMBP3CA6NJZ7 1639 aa23.87■■□□□ 1.41
PPHLN1-223ENST00000610488 RIMBP3BA6NNM3 1639 aa23.87■■□□□ 1.41
PPHLN1-223ENST00000610488 RIMBP3Q9UFD9 1639 aa23.87■■□□□ 1.41
PPHLN1-223ENST00000610488 RAD54L2Q9Y4B4 1467 aa23.87■■□□□ 1.41
PPHLN1-223ENST00000610488 FGD5Q6ZNL6 1462 aa23.83■■□□□ 1.41
PPHLN1-223ENST00000610488 CUX1P39880 1505 aa23.83■■□□□ 1.41
PPHLN1-223ENST00000610488 SOGA1O94964 1423 aa23.82■■□□□ 1.4
PPHLN1-223ENST00000610488 ARHGEF11O15085 1522 aa23.76■■□□□ 1.39
PPHLN1-223ENST00000610488 TDRD9Q8NDG6 1382 aaKnown RBP23.75■■□□□ 1.39
PPHLN1-223ENST00000610488 FBLN2P98095 1184 aa23.75■■□□□ 1.39
PPHLN1-223ENST00000610488 WDR97A6NE52 1622 aa23.74■■□□□ 1.39
PPHLN1-223ENST00000610488 SNAPC4Q5SXM2 1469 aa23.7■■□□□ 1.39
PPHLN1-223ENST00000610488 PBRM1Q86U86 1689 aa23.67■■□□□ 1.38
PPHLN1-223ENST00000610488 GRIN2BQ13224 1484 aa23.61■■□□□ 1.37
PPHLN1-223ENST00000610488 MAGI1Q96QZ7 1491 aaPredicted RBP23.6■■□□□ 1.37
PPHLN1-223ENST00000610488 CHMP7Q8WUX9 453 aaPredicted RBP23.56■■□□□ 1.36
PPHLN1-223ENST00000610488 SYNJ1O43426 1573 aa23.56■■□□□ 1.36
PPHLN1-223ENST00000610488 GAPVD1Q14C86 1478 aa23.55■■□□□ 1.36
PPHLN1-223ENST00000610488 ABCA5Q8WWZ7 1642 aa23.55■■□□□ 1.36
PPHLN1-223ENST00000610488 CYB5RLQ6IPT4 315 aa23.54■■□□□ 1.36
PPHLN1-223ENST00000610488 CLASP1Q7Z460 1538 aa23.53■■□□□ 1.36
PPHLN1-223ENST00000610488 ABCA10Q8WWZ4 1543 aa23.53■■□□□ 1.36
PPHLN1-223ENST00000610488 SYNJ2O15056 1496 aa23.52■■□□□ 1.36
PPHLN1-223ENST00000610488 ARAP1Q96P48 1450 aa23.52■■□□□ 1.36
PPHLN1-223ENST00000610488 BIVM-ERCC5R4GMW8 1640 aa23.52■■□□□ 1.36
PPHLN1-223ENST00000610488 TOP2BQ02880 1626 aa23.48■■□□□ 1.35
PPHLN1-223ENST00000610488 WRNQ14191 1432 aaPredicted RBP eCLIP23.45■■□□□ 1.34
PPHLN1-223ENST00000610488 ADAMTS12P58397 1594 aa23.38■■□□□ 1.33
PPHLN1-223ENST00000610488 GRIN2AQ12879 1464 aa23.32■■□□□ 1.32
PPHLN1-223ENST00000610488 TRHP20396 242 aaPredicted RBP23.29■■□□□ 1.32
PPHLN1-223ENST00000610488 CEP170Q5SW79 1584 aa23.27■■□□□ 1.32
PPHLN1-223ENST00000610488 ERICH3Q5RHP9 1530 aa23.26■■□□□ 1.31
PPHLN1-223ENST00000610488 FHAD1B1AJZ9 1412 aa23.24■■□□□ 1.31
PPHLN1-223ENST00000610488 NUP160Q12769 1436 aa23.2■■□□□ 1.3
PPHLN1-223ENST00000610488 ERCC6L2Q5T890 1561 aa23.19■■□□□ 1.3
PPHLN1-223ENST00000610488 SHROOM2Q13796 1616 aa23.14■■□□□ 1.3
PPHLN1-223ENST00000610488 RUSC2Q8N2Y8 1516 aa23.05■■□□□ 1.28
PPHLN1-223ENST00000610488 CUL7Q14999 1698 aa23.01■■□□□ 1.27
PPHLN1-223ENST00000610488 KIF27Q86VH2 1401 aa23■■□□□ 1.27
PPHLN1-223ENST00000610488 PRG4Q92954 1404 aaPredicted RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms