RNA–Protein interactions for RNA: ENST00000317560.13

PPHLN1-202, Transcript of periphilin 1, humanhuman

TSL 2 BASIC

Gene PPHLN1, Length 1,359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPHLN1-202ENST00000317560 AEBP2Q6ZN18 517 aaPredicted RBP27.26■■□□□ 1.95
PPHLN1-202ENST00000317560 CHIC1Q5VXU3 224 aa26.44■■□□□ 1.82
PPHLN1-202ENST00000317560 PHF23Q9BUL5 403 aaPredicted RBP23.22■■□□□ 1.31
PPHLN1-202ENST00000317560 SENP3Q9H4L4 574 aaPredicted RBP23.17■■□□□ 1.3
PPHLN1-202ENST00000317560 FOXD1Q16676 465 aa21.52■■□□□ 1.04
PPHLN1-202ENST00000317560 PLPPR3Q6T4P5 718 aa21.37■■□□□ 1.01
PPHLN1-202ENST00000317560 PPP6R1Q9UPN7 881 aa20.54■□□□□ 0.88
PPHLN1-202ENST00000317560 ADRA2BP18089 450 aa20.51■□□□□ 0.87
PPHLN1-202ENST00000317560 PIAS4Q8N2W9 510 aaPredicted RBP20.25■□□□□ 0.83
PPHLN1-202ENST00000317560 MSH5O43196 834 aa19.95■□□□□ 0.78
PPHLN1-202ENST00000317560 PPP4R3CPQ6ZMV5 832 aa18.8■□□□□ 0.6
PPHLN1-202ENST00000317560 SCAF1Q9H7N4 1312 aaKnown RBP18.76■□□□□ 0.59
PPHLN1-202ENST00000317560 MAPK8IP2Q13387 824 aaPredicted RBP18.66■□□□□ 0.58
PPHLN1-202ENST00000317560 POTEDQ86YR6 584 aa18.5■□□□□ 0.55
PPHLN1-202ENST00000317560 DMRT2Q9Y5R5 561 aa18.47■□□□□ 0.55
PPHLN1-202ENST00000317560 CNKSR2Q8WXI2 1034 aa18.32■□□□□ 0.52
PPHLN1-202ENST00000317560 NCBP3Q53F19 620 aaKnown RBP18.25■□□□□ 0.51
PPHLN1-202ENST00000317560 KCNA4P22459 653 aa18.15■□□□□ 0.5
PPHLN1-202ENST00000317560 RNF216Q9NWF9 866 aaPredicted RBP18.03■□□□□ 0.48
PPHLN1-202ENST00000317560 HOXD11P31277 338 aaPredicted RBP18.01■□□□□ 0.47
PPHLN1-202ENST00000317560 NPM3O75607 178 aaKnown RBP18■□□□□ 0.47
PPHLN1-202ENST00000317560 DCAF8L1A6NGE4 600 aa17.65■□□□□ 0.42
PPHLN1-202ENST00000317560 DNAJC5BQ9UF47 199 aa17.53■□□□□ 0.4
PPHLN1-202ENST00000317560 SLC4A1APQ9BWU0 796 aaKnown RBP17.23■□□□□ 0.35
PPHLN1-202ENST00000317560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.14■□□□□ 0.33
PPHLN1-202ENST00000317560 RNF39Q9H2S5 420 aa17.07■□□□□ 0.32
PPHLN1-202ENST00000317560 SLC4A2P04920 1241 aa17.04■□□□□ 0.32
PPHLN1-202ENST00000317560 U3KPZ7 1027 aaPredicted RBP16.87■□□□□ 0.29
PPHLN1-202ENST00000317560 C1QBPQ07021 282 aaKnown RBP16.85■□□□□ 0.29
PPHLN1-202ENST00000317560 FOXD4L1Q9NU39 408 aa16.77■□□□□ 0.27
PPHLN1-202ENST00000317560 CACNB1Q02641 598 aaPredicted RBP16.74■□□□□ 0.27
PPHLN1-202ENST00000317560 ZBTB22O15209 634 aa16.69■□□□□ 0.26
PPHLN1-202ENST00000317560 MYCNP04198 464 aaPredicted RBP16.64■□□□□ 0.25
PPHLN1-202ENST00000317560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.57■□□□□ 0.24
PPHLN1-202ENST00000317560 HNRNPUL2Q1KMD3 747 aaKnown RBP16.57■□□□□ 0.24
PPHLN1-202ENST00000317560 SAMD1Q6SPF0 538 aaPredicted RBP16.51■□□□□ 0.23
PPHLN1-202ENST00000317560 EHMT2Q96KQ7 1210 aa16.51■□□□□ 0.23
PPHLN1-202ENST00000317560 APLP2Q06481 763 aa16.45■□□□□ 0.22
PPHLN1-202ENST00000317560 SPINK5Q9NQ38 1064 aaPredicted RBP16.44■□□□□ 0.22
PPHLN1-202ENST00000317560 NISCHQ9Y2I1 1504 aa16.43■□□□□ 0.22
PPHLN1-202ENST00000317560 CSRNP3Q8WYN3 585 aa16.42■□□□□ 0.22
PPHLN1-202ENST00000317560 CAPN15O75808 1086 aa16.38■□□□□ 0.21
PPHLN1-202ENST00000317560 ZNF219Q9P2Y4 722 aaPredicted RBP16.26■□□□□ 0.19
PPHLN1-202ENST00000317560 TRHP20396 242 aaPredicted RBP16.25■□□□□ 0.19
PPHLN1-202ENST00000317560 ATXN8OSP0DMR3 200 aa16.19■□□□□ 0.18
PPHLN1-202ENST00000317560 ATF5Q9Y2D1 282 aaPredicted RBP16.19■□□□□ 0.18
PPHLN1-202ENST00000317560 DSG3P32926 999 aa16.16■□□□□ 0.18
PPHLN1-202ENST00000317560 ABCB7O75027 752 aa16.05■□□□□ 0.16
PPHLN1-202ENST00000317560 POLA2Q14181 598 aa15.93■□□□□ 0.14
PPHLN1-202ENST00000317560 ZBTB12Q9Y330 459 aaPredicted RBP15.69■□□□□ 0.1
PPHLN1-202ENST00000317560 FBLN2P98095 1184 aa15.53■□□□□ 0.08
PPHLN1-202ENST00000317560 MKRN4PQ13434 485 aaPredicted RBP15.49■□□□□ 0.07
PPHLN1-202ENST00000317560 OSCARQ8IYS5 282 aa15.43■□□□□ 0.06
PPHLN1-202ENST00000317560 RBM42Q9BTD8 480 aaKnown RBP15.42■□□□□ 0.06
PPHLN1-202ENST00000317560 SPDYE2BA6NHP3 402 aa15.24■□□□□ 0.03
PPHLN1-202ENST00000317560 SPDYE6P0CI01 402 aa15.24■□□□□ 0.03
PPHLN1-202ENST00000317560 SPDYE2Q495Y8 402 aa15.24■□□□□ 0.03
PPHLN1-202ENST00000317560 AKT1S1Q96B36 256 aa15.18■□□□□ 0.02
PPHLN1-202ENST00000317560 ZNF692Q9BU19 519 aaPredicted RBP15.12■□□□□ 0.01
PPHLN1-202ENST00000317560 SSUH2Q9Y2M2 353 aa15.11■□□□□ 0.01
PPHLN1-202ENST00000317560 SPDYE4A6NLX3 237 aa15.03■□□□□ -0
PPHLN1-202ENST00000317560 REM2Q8IYK8 340 aaPredicted RBP15.02■□□□□ -0
PPHLN1-202ENST00000317560 PABPN1Q86U42 306 aaKnown RBP eCLIP14.93□□□□□ -0.02
PPHLN1-202ENST00000317560 PITPNM1O00562 1244 aa14.86□□□□□ -0.03
PPHLN1-202ENST00000317560 FKBP8Q14318 412 aa14.85□□□□□ -0.03
PPHLN1-202ENST00000317560 CHRDL2Q6WN34 429 aa14.85□□□□□ -0.03
PPHLN1-202ENST00000317560 SPDYE1Q8NFV5 336 aaPredicted RBP14.85□□□□□ -0.03
PPHLN1-202ENST00000317560 PROM2Q8N271 834 aa14.79□□□□□ -0.04
PPHLN1-202ENST00000317560 CLEC11AQ9Y240 323 aa14.76□□□□□ -0.05
PPHLN1-202ENST00000317560 STAG3Q9UJ98 1225 aa14.64□□□□□ -0.07
PPHLN1-202ENST00000317560 FXR2P51116 673 aaKnown RBP eCLIP14.62□□□□□ -0.07
PPHLN1-202ENST00000317560 POTEHQ6S545 545 aa14.61□□□□□ -0.07
PPHLN1-202ENST00000317560 PIP4P2Q8N4L2 257 aa14.6□□□□□ -0.07
PPHLN1-202ENST00000317560 PRR29P0C7W0 189 aa14.6□□□□□ -0.07
PPHLN1-202ENST00000317560 PRKAR2AP13861 404 aaKnown RBP14.47□□□□□ -0.09
PPHLN1-202ENST00000317560 CHADLQ6NUI6 762 aa14.43□□□□□ -0.1
PPHLN1-202ENST00000317560 CREBZFQ9NS37 354 aa14.38□□□□□ -0.11
PPHLN1-202ENST00000317560 FBXO3Q9UK99 471 aa14.38□□□□□ -0.11
PPHLN1-202ENST00000317560 FARP1Q9Y4F1 1045 aaPredicted RBP14.28□□□□□ -0.12
PPHLN1-202ENST00000317560 MIER1Q8N108 512 aa14.26□□□□□ -0.13
PPHLN1-202ENST00000317560 MNX1P50219 401 aaPredicted RBP14.22□□□□□ -0.13
PPHLN1-202ENST00000317560 PLCD3Q8N3E9 789 aa14.22□□□□□ -0.13
PPHLN1-202ENST00000317560 PLEKHG5O94827 1062 aa14.22□□□□□ -0.13
PPHLN1-202ENST00000317560 VASPP50552 380 aaPredicted RBP14.21□□□□□ -0.14
PPHLN1-202ENST00000317560 HAX1O00165 279 aa14.18□□□□□ -0.14
PPHLN1-202ENST00000317560 C19orf67A6NJJ6 358 aa14.13□□□□□ -0.15
PPHLN1-202ENST00000317560 NPM1P06748 294 aaKnown RBP eCLIP14.13□□□□□ -0.15
PPHLN1-202ENST00000317560 CCDC180Q9P1Z9 1646 aa14.12□□□□□ -0.15
PPHLN1-202ENST00000317560 ZBTB47Q9UFB7 747 aaPredicted RBP14.1□□□□□ -0.15
PPHLN1-202ENST00000317560 CD44P16070 742 aaKnown RBP14.06□□□□□ -0.16
PPHLN1-202ENST00000317560 EVX2Q03828 476 aa14.05□□□□□ -0.16
PPHLN1-202ENST00000317560 IFNLR1Q8IU57 520 aaPredicted RBP13.99□□□□□ -0.17
PPHLN1-202ENST00000317560 KLHL34Q8N239 644 aa13.98□□□□□ -0.17
PPHLN1-202ENST00000317560 SP7Q8TDD2 431 aaPredicted RBP13.96□□□□□ -0.17
PPHLN1-202ENST00000317560 PAK3O75914 559 aaPredicted RBP13.96□□□□□ -0.18
PPHLN1-202ENST00000317560 NUBP1P53384 320 aa13.95□□□□□ -0.18
PPHLN1-202ENST00000317560 RASEFQ8IZ41 740 aa13.94□□□□□ -0.18
PPHLN1-202ENST00000317560 ZRANB1Q9UGI0 708 aa13.94□□□□□ -0.18
PPHLN1-202ENST00000317560 ZNF579Q8NAF0 562 aaKnown RBP13.89□□□□□ -0.19
PPHLN1-202ENST00000317560 TSPYL2Q9H2G4 693 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms