RNA–Protein interactions for RNA: ENST00000549190.5

PPHLN1-213, Transcript of periphilin 1, humanhuman

TSL 5 BASIC

Gene PPHLN1, Length 1,777 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPHLN1-213ENST00000549190 NISCHQ9Y2I1 1504 aa45.93■■■■■ 4.94
PPHLN1-213ENST00000549190 CCDC180Q9P1Z9 1646 aa40.87■■■■■ 4.13
PPHLN1-213ENST00000549190 ABCC9O60706 1549 aa40.26■■■■■ 4.03
PPHLN1-213ENST00000549190 DCAF8L2P0C7V8 631 aa38.63■■■■□ 3.77
PPHLN1-213ENST00000549190 RB1CC1Q8TDY2 1594 aa38.59■■■■□ 3.77
PPHLN1-213ENST00000549190 NACADO15069 1562 aa38.49■■■■□ 3.75
PPHLN1-213ENST00000549190 ZCCHC6Q5VYS8 1495 aaKnown RBP38.2■■■■□ 3.71
PPHLN1-213ENST00000549190 MYO15BQ96JP2 1530 aa38.15■■■■□ 3.7
PPHLN1-213ENST00000549190 DCAF1Q9Y4B6 1507 aa37.94■■■■□ 3.66
PPHLN1-213ENST00000549190 UNC13AQ9UPW8 1703 aa37.71■■■■□ 3.63
PPHLN1-213ENST00000549190 PABPN1Q86U42 306 aaKnown RBP eCLIP37.63■■■■□ 3.61
PPHLN1-213ENST00000549190 BICRAQ9NZM4 1560 aa37.41■■■■□ 3.58
PPHLN1-213ENST00000549190 SCRIBQ14160 1630 aa37.37■■■■□ 3.57
PPHLN1-213ENST00000549190 DNAJC5BQ9UF47 199 aa37.1■■■■□ 3.53
PPHLN1-213ENST00000549190 SHROOM4Q9ULL8 1493 aa36.95■■■■□ 3.51
PPHLN1-213ENST00000549190 EIF4G1Q04637 1599 aaKnown RBP36.46■■■■□ 3.43
PPHLN1-213ENST00000549190 CC2D2AQ9P2K1 1620 aa36.36■■■■□ 3.41
PPHLN1-213ENST00000549190 CECR2Q9BXF3 1484 aa36.17■■■■□ 3.38
PPHLN1-213ENST00000549190 SMARCA4P51532 1647 aa35.68■■■■□ 3.3
PPHLN1-213ENST00000549190 BAZ1AQ9NRL2 1556 aaPredicted RBP35.62■■■■□ 3.29
PPHLN1-213ENST00000549190 ATAD2BQ9ULI0 1458 aa35.53■■■■□ 3.28
PPHLN1-213ENST00000549190 NCAPD3P42695 1498 aa35.52■■■■□ 3.28
PPHLN1-213ENST00000549190 SMARCA2P51531 1590 aa35.48■■■■□ 3.27
PPHLN1-213ENST00000549190 MROH2BQ7Z745 1585 aa35.41■■■■□ 3.26
PPHLN1-213ENST00000549190 HMGXB3Q12766 1538 aa35.31■■■■□ 3.24
PPHLN1-213ENST00000549190 PEG3Q9GZU2 1588 aa35.28■■■■□ 3.24
PPHLN1-213ENST00000549190 BAZ1BQ9UIG0 1483 aaKnown RBP35.26■■■■□ 3.23
PPHLN1-213ENST00000549190 WIZO95785 1651 aa35.04■■■■□ 3.2
PPHLN1-213ENST00000549190 RSF1Q96T23 1441 aaPredicted RBP34.95■■■■□ 3.19
PPHLN1-213ENST00000549190 NESP48681 1621 aa34.77■■■■□ 3.16
PPHLN1-213ENST00000549190 ERCC6Q03468 1493 aa34.73■■■■□ 3.15
PPHLN1-213ENST00000549190 TOP2AP11388 1531 aaKnown RBP34.62■■■■□ 3.13
PPHLN1-213ENST00000549190 LAMC3Q9Y6N6 1575 aa34.61■■■■□ 3.13
PPHLN1-213ENST00000549190 CADPSQ9ULU8 1353 aa34.51■■■■□ 3.11
PPHLN1-213ENST00000549190 PDS5BQ9NTI5 1447 aa34.42■■■■□ 3.1
PPHLN1-213ENST00000549190 KIF21AQ7Z4S6 1674 aa34.34■■■■□ 3.09
PPHLN1-213ENST00000549190 CUX2O14529 1486 aa34.34■■■■□ 3.09
PPHLN1-213ENST00000549190 CCDC88BA6NC98 1476 aa34.25■■■■□ 3.07
PPHLN1-213ENST00000549190 CFTRP13569 1480 aa34.25■■■■□ 3.07
PPHLN1-213ENST00000549190 THOC2Q8NI27 1593 aaKnown RBP34.22■■■■□ 3.07
PPHLN1-213ENST00000549190 FANCD2Q9BXW9 1451 aa34.13■■■■□ 3.05
PPHLN1-213ENST00000549190 CEP164Q9UPV0 1460 aa34.09■■■■□ 3.05
PPHLN1-213ENST00000549190 SUPT5HO00267 1087 aaKnown RBP34.08■■■■□ 3.05
PPHLN1-213ENST00000549190 MRC2Q9UBG0 1479 aa34.06■■■■□ 3.04
PPHLN1-213ENST00000549190 PRDM2Q13029 1718 aa33.95■■■■□ 3.02
PPHLN1-213ENST00000549190 WDR62O43379 1518 aa33.93■■■■□ 3.02
PPHLN1-213ENST00000549190 URB2Q14146 1524 aaKnown RBP33.78■■■■□ 3
PPHLN1-213ENST00000549190 TOPBP1Q92547 1522 aa33.55■■■□□ 2.96
PPHLN1-213ENST00000549190 DNAJC5Q9H3Z4 198 aa33.53■■■□□ 2.96
PPHLN1-213ENST00000549190 ABCC8Q09428 1581 aa33.52■■■□□ 2.96
PPHLN1-213ENST00000549190 DNMBPQ6XZF7 1577 aa33.48■■■□□ 2.95
PPHLN1-213ENST00000549190 IFT140Q96RY7 1462 aa33.37■■■□□ 2.93
PPHLN1-213ENST00000549190 ZNF608Q9ULD9 1512 aaPredicted RBP33.26■■■□□ 2.91
PPHLN1-213ENST00000549190 POLA1P09884 1462 aaPredicted RBP33.25■■■□□ 2.91
PPHLN1-213ENST00000549190 CUX1P39880 1505 aa33.23■■■□□ 2.91
PPHLN1-213ENST00000549190 TARBP1Q13395 1621 aaKnown RBP33.17■■■□□ 2.9
PPHLN1-213ENST00000549190 FGD5Q6ZNL6 1462 aa33.16■■■□□ 2.9
PPHLN1-213ENST00000549190 RAD54L2Q9Y4B4 1467 aa33.14■■■□□ 2.9
PPHLN1-213ENST00000549190 SOGA1O94964 1423 aa33.14■■■□□ 2.9
PPHLN1-213ENST00000549190 EIF4G3O43432 1585 aaKnown RBP33.1■■■□□ 2.89
PPHLN1-213ENST00000549190 AQRO60306 1485 aaKnown RBP eCLIP33.08■■■□□ 2.89
PPHLN1-213ENST00000549190 TDRD9Q8NDG6 1382 aaKnown RBP33■■■□□ 2.87
PPHLN1-213ENST00000549190 WRNQ14191 1432 aaPredicted RBP eCLIP32.98■■■□□ 2.87
PPHLN1-213ENST00000549190 OSCARQ8IYS5 282 aa32.97■■■□□ 2.87
PPHLN1-213ENST00000549190 TOP2BQ02880 1626 aa32.89■■■□□ 2.86
PPHLN1-213ENST00000549190 SYNJ1O43426 1573 aa32.88■■■□□ 2.85
PPHLN1-213ENST00000549190 BIVM-ERCC5R4GMW8 1640 aa32.87■■■□□ 2.85
PPHLN1-213ENST00000549190 WDR97A6NE52 1622 aa32.86■■■□□ 2.85
PPHLN1-213ENST00000549190 ABCA10Q8WWZ4 1543 aa32.8■■■□□ 2.84
PPHLN1-213ENST00000549190 FBLN2P98095 1184 aa32.8■■■□□ 2.84
PPHLN1-213ENST00000549190 GRIN2BQ13224 1484 aa32.75■■■□□ 2.83
PPHLN1-213ENST00000549190 GAPVD1Q14C86 1478 aa32.75■■■□□ 2.83
PPHLN1-213ENST00000549190 SNAPC4Q5SXM2 1469 aa32.74■■■□□ 2.83
PPHLN1-213ENST00000549190 CHD1O14646 1710 aa32.72■■■□□ 2.83
PPHLN1-213ENST00000549190 ABCA5Q8WWZ7 1642 aa32.67■■■□□ 2.82
PPHLN1-213ENST00000549190 MAGI1Q96QZ7 1491 aaPredicted RBP32.67■■■□□ 2.82
PPHLN1-213ENST00000549190 PBRM1Q86U86 1689 aa32.66■■■□□ 2.82
PPHLN1-213ENST00000549190 CHMP7Q8WUX9 453 aaPredicted RBP32.64■■■□□ 2.82
PPHLN1-213ENST00000549190 SYNJ2O15056 1496 aa32.55■■■□□ 2.8
PPHLN1-213ENST00000549190 TRIM41Q8WV44 630 aa32.46■■■□□ 2.79
PPHLN1-213ENST00000549190 RIMBP3CA6NJZ7 1639 aa32.41■■■□□ 2.78
PPHLN1-213ENST00000549190 RIMBP3BA6NNM3 1639 aa32.41■■■□□ 2.78
PPHLN1-213ENST00000549190 RIMBP3Q9UFD9 1639 aa32.41■■■□□ 2.78
PPHLN1-213ENST00000549190 ERICH3Q5RHP9 1530 aa32.41■■■□□ 2.78
PPHLN1-213ENST00000549190 ARHGEF11O15085 1522 aa32.39■■■□□ 2.78
PPHLN1-213ENST00000549190 ADAMTS12P58397 1594 aa32.38■■■□□ 2.77
PPHLN1-213ENST00000549190 FHAD1B1AJZ9 1412 aa32.35■■■□□ 2.77
PPHLN1-213ENST00000549190 CLASP1Q7Z460 1538 aa32.33■■■□□ 2.77
PPHLN1-213ENST00000549190 GRIN2AQ12879 1464 aa32.32■■■□□ 2.77
PPHLN1-213ENST00000549190 KIF27Q86VH2 1401 aa32.31■■■□□ 2.76
PPHLN1-213ENST00000549190 IGF1RP08069 1367 aa32.19■■■□□ 2.74
PPHLN1-213ENST00000549190 CYB5RLQ6IPT4 315 aa32.18■■■□□ 2.74
PPHLN1-213ENST00000549190 CEP170Q5SW79 1584 aa32.17■■■□□ 2.74
PPHLN1-213ENST00000549190 NUP160Q12769 1436 aa32.16■■■□□ 2.74
PPHLN1-213ENST00000549190 ARAP1Q96P48 1450 aa32.11■■■□□ 2.73
PPHLN1-213ENST00000549190 CUL7Q14999 1698 aa32.08■■■□□ 2.73
PPHLN1-213ENST00000549190 CARMIL1Q5VZK9 1371 aa32.01■■■□□ 2.72
PPHLN1-213ENST00000549190 RUSC2Q8N2Y8 1516 aa31.97■■■□□ 2.71
PPHLN1-213ENST00000549190 SHROOM2Q13796 1616 aa31.92■■■□□ 2.7
PPHLN1-213ENST00000549190 ERCC6L2Q5T890 1561 aa31.91■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms