RNA–Protein interactions for RNA: ENST00000552761.5

PPHLN1-221, Transcript of periphilin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPHLN1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPHLN1-221ENST00000552761 NISCHQ9Y2I1 1504 aa39.56■■■■□ 3.92
PPHLN1-221ENST00000552761 CCDC180Q9P1Z9 1646 aa35.36■■■■□ 3.25
PPHLN1-221ENST00000552761 ABCC9O60706 1549 aa35.02■■■■□ 3.2
PPHLN1-221ENST00000552761 RB1CC1Q8TDY2 1594 aa33.42■■■□□ 2.94
PPHLN1-221ENST00000552761 NACADO15069 1562 aa33.25■■■□□ 2.91
PPHLN1-221ENST00000552761 DCAF8L2P0C7V8 631 aa33.14■■■□□ 2.9
PPHLN1-221ENST00000552761 ZCCHC6Q5VYS8 1495 aaKnown RBP32.93■■■□□ 2.86
PPHLN1-221ENST00000552761 UNC13AQ9UPW8 1703 aa32.88■■■□□ 2.85
PPHLN1-221ENST00000552761 MYO15BQ96JP2 1530 aa32.86■■■□□ 2.85
PPHLN1-221ENST00000552761 DCAF1Q9Y4B6 1507 aa32.62■■■□□ 2.81
PPHLN1-221ENST00000552761 PABPN1Q86U42 306 aaKnown RBP eCLIP32.61■■■□□ 2.81
PPHLN1-221ENST00000552761 BICRAQ9NZM4 1560 aa32.55■■■□□ 2.8
PPHLN1-221ENST00000552761 DNAJC5BQ9UF47 199 aa32.45■■■□□ 2.79
PPHLN1-221ENST00000552761 SCRIBQ14160 1630 aa32.37■■■□□ 2.77
PPHLN1-221ENST00000552761 SHROOM4Q9ULL8 1493 aa31.94■■■□□ 2.7
PPHLN1-221ENST00000552761 EIF4G1Q04637 1599 aaKnown RBP31.67■■■□□ 2.66
PPHLN1-221ENST00000552761 CC2D2AQ9P2K1 1620 aa31.66■■■□□ 2.66
PPHLN1-221ENST00000552761 CECR2Q9BXF3 1484 aa31.44■■■□□ 2.62
PPHLN1-221ENST00000552761 SMARCA4P51532 1647 aa30.85■■■□□ 2.53
PPHLN1-221ENST00000552761 ATAD2BQ9ULI0 1458 aa30.7■■■□□ 2.51
PPHLN1-221ENST00000552761 BAZ1AQ9NRL2 1556 aaPredicted RBP30.66■■■□□ 2.5
PPHLN1-221ENST00000552761 NCAPD3P42695 1498 aa30.66■■■□□ 2.5
PPHLN1-221ENST00000552761 SMARCA2P51531 1590 aa30.61■■■□□ 2.49
PPHLN1-221ENST00000552761 MROH2BQ7Z745 1585 aa30.57■■■□□ 2.48
PPHLN1-221ENST00000552761 HMGXB3Q12766 1538 aa30.56■■■□□ 2.48
PPHLN1-221ENST00000552761 PEG3Q9GZU2 1588 aa30.47■■■□□ 2.47
PPHLN1-221ENST00000552761 BAZ1BQ9UIG0 1483 aaKnown RBP30.44■■■□□ 2.46
PPHLN1-221ENST00000552761 WIZO95785 1651 aa30.27■■■□□ 2.44
PPHLN1-221ENST00000552761 NESP48681 1621 aa30.24■■■□□ 2.43
PPHLN1-221ENST00000552761 ERCC6Q03468 1493 aa30.13■■■□□ 2.41
PPHLN1-221ENST00000552761 RSF1Q96T23 1441 aaPredicted RBP30■■■□□ 2.39
PPHLN1-221ENST00000552761 LAMC3Q9Y6N6 1575 aa29.97■■■□□ 2.39
PPHLN1-221ENST00000552761 KIF21AQ7Z4S6 1674 aa29.91■■■□□ 2.38
PPHLN1-221ENST00000552761 CUX2O14529 1486 aa29.89■■■□□ 2.38
PPHLN1-221ENST00000552761 THOC2Q8NI27 1593 aaKnown RBP29.88■■■□□ 2.37
PPHLN1-221ENST00000552761 TOP2AP11388 1531 aaKnown RBP29.84■■■□□ 2.37
PPHLN1-221ENST00000552761 CADPSQ9ULU8 1353 aa29.75■■■□□ 2.35
PPHLN1-221ENST00000552761 PDS5BQ9NTI5 1447 aa29.69■■■□□ 2.34
PPHLN1-221ENST00000552761 CFTRP13569 1480 aa29.54■■■□□ 2.32
PPHLN1-221ENST00000552761 MRC2Q9UBG0 1479 aa29.53■■■□□ 2.32
PPHLN1-221ENST00000552761 FANCD2Q9BXW9 1451 aa29.49■■■□□ 2.31
PPHLN1-221ENST00000552761 CEP164Q9UPV0 1460 aa29.48■■■□□ 2.31
PPHLN1-221ENST00000552761 WDR62O43379 1518 aa29.48■■■□□ 2.31
PPHLN1-221ENST00000552761 CCDC88BA6NC98 1476 aa29.47■■■□□ 2.31
PPHLN1-221ENST00000552761 PRDM2Q13029 1718 aa29.42■■■□□ 2.3
PPHLN1-221ENST00000552761 DNAJC5Q9H3Z4 198 aa29.35■■■□□ 2.29
PPHLN1-221ENST00000552761 URB2Q14146 1524 aaKnown RBP29.29■■■□□ 2.28
PPHLN1-221ENST00000552761 TOPBP1Q92547 1522 aa29■■■□□ 2.23
PPHLN1-221ENST00000552761 SUPT5HO00267 1087 aaKnown RBP28.95■■■□□ 2.22
PPHLN1-221ENST00000552761 DNMBPQ6XZF7 1577 aa28.94■■■□□ 2.22
PPHLN1-221ENST00000552761 ZNF608Q9ULD9 1512 aaPredicted RBP28.88■■■□□ 2.21
PPHLN1-221ENST00000552761 IFT140Q96RY7 1462 aa28.84■■■□□ 2.21
PPHLN1-221ENST00000552761 ABCC8Q09428 1581 aa28.79■■■□□ 2.2
PPHLN1-221ENST00000552761 EIF4G3O43432 1585 aaKnown RBP28.78■■■□□ 2.2
PPHLN1-221ENST00000552761 TARBP1Q13395 1621 aaKnown RBP28.76■■■□□ 2.2
PPHLN1-221ENST00000552761 POLA1P09884 1462 aaPredicted RBP28.74■■■□□ 2.19
PPHLN1-221ENST00000552761 CUX1P39880 1505 aa28.7■■■□□ 2.19
PPHLN1-221ENST00000552761 RAD54L2Q9Y4B4 1467 aa28.66■■■□□ 2.18
PPHLN1-221ENST00000552761 FGD5Q6ZNL6 1462 aa28.63■■■□□ 2.17
PPHLN1-221ENST00000552761 AQRO60306 1485 aaKnown RBP eCLIP28.61■■■□□ 2.17
PPHLN1-221ENST00000552761 SOGA1O94964 1423 aa28.52■■■□□ 2.16
PPHLN1-221ENST00000552761 CHD1O14646 1710 aa28.52■■■□□ 2.16
PPHLN1-221ENST00000552761 WDR97A6NE52 1622 aa28.51■■■□□ 2.15
PPHLN1-221ENST00000552761 OSCARQ8IYS5 282 aa28.47■■■□□ 2.15
PPHLN1-221ENST00000552761 TDRD9Q8NDG6 1382 aaKnown RBP28.47■■■□□ 2.15
PPHLN1-221ENST00000552761 SYNJ1O43426 1573 aa28.38■■■□□ 2.13
PPHLN1-221ENST00000552761 SNAPC4Q5SXM2 1469 aa28.37■■■□□ 2.13
PPHLN1-221ENST00000552761 TRIM41Q8WV44 630 aa28.36■■■□□ 2.13
PPHLN1-221ENST00000552761 BIVM-ERCC5R4GMW8 1640 aa28.34■■■□□ 2.13
PPHLN1-221ENST00000552761 PBRM1Q86U86 1689 aa28.34■■■□□ 2.13
PPHLN1-221ENST00000552761 RIMBP3CA6NJZ7 1639 aa28.32■■■□□ 2.12
PPHLN1-221ENST00000552761 RIMBP3BA6NNM3 1639 aa28.32■■■□□ 2.12
PPHLN1-221ENST00000552761 RIMBP3Q9UFD9 1639 aa28.32■■■□□ 2.12
PPHLN1-221ENST00000552761 TOP2BQ02880 1626 aa28.3■■■□□ 2.12
PPHLN1-221ENST00000552761 ABCA5Q8WWZ7 1642 aa28.3■■■□□ 2.12
PPHLN1-221ENST00000552761 ABCA10Q8WWZ4 1543 aa28.28■■■□□ 2.12
PPHLN1-221ENST00000552761 WRNQ14191 1432 aaPredicted RBP eCLIP28.27■■■□□ 2.12
PPHLN1-221ENST00000552761 FBLN2P98095 1184 aa28.26■■■□□ 2.11
PPHLN1-221ENST00000552761 GRIN2BQ13224 1484 aa28.25■■■□□ 2.11
PPHLN1-221ENST00000552761 ARHGEF11O15085 1522 aa28.23■■■□□ 2.11
PPHLN1-221ENST00000552761 GAPVD1Q14C86 1478 aa28.22■■■□□ 2.11
PPHLN1-221ENST00000552761 MAGI1Q96QZ7 1491 aaPredicted RBP28.21■■■□□ 2.11
PPHLN1-221ENST00000552761 CLASP1Q7Z460 1538 aa28.13■■■□□ 2.09
PPHLN1-221ENST00000552761 SYNJ2O15056 1496 aa28.12■■■□□ 2.09
PPHLN1-221ENST00000552761 ADAMTS12P58397 1594 aa28.07■■■□□ 2.08
PPHLN1-221ENST00000552761 CHMP7Q8WUX9 453 aaPredicted RBP28.05■■■□□ 2.08
PPHLN1-221ENST00000552761 ARAP1Q96P48 1450 aa28.02■■■□□ 2.08
PPHLN1-221ENST00000552761 GRIN2AQ12879 1464 aa27.94■■■□□ 2.06
PPHLN1-221ENST00000552761 CEP170Q5SW79 1584 aa27.91■■■□□ 2.06
PPHLN1-221ENST00000552761 ERICH3Q5RHP9 1530 aa27.91■■■□□ 2.06
PPHLN1-221ENST00000552761 CYB5RLQ6IPT4 315 aa27.88■■■□□ 2.05
PPHLN1-221ENST00000552761 FHAD1B1AJZ9 1412 aa27.84■■■□□ 2.05
PPHLN1-221ENST00000552761 NUP160Q12769 1436 aa27.81■■■□□ 2.04
PPHLN1-221ENST00000552761 ERCC6L2Q5T890 1561 aa27.81■■■□□ 2.04
PPHLN1-221ENST00000552761 SHROOM2Q13796 1616 aa27.7■■■□□ 2.03
PPHLN1-221ENST00000552761 RUSC2Q8N2Y8 1516 aa27.67■■■□□ 2.02
PPHLN1-221ENST00000552761 KIF27Q86VH2 1401 aa27.66■■■□□ 2.02
PPHLN1-221ENST00000552761 CUL7Q14999 1698 aa27.63■■■□□ 2.01
PPHLN1-221ENST00000552761 IGF1RP08069 1367 aa27.6■■■□□ 2.01
PPHLN1-221ENST00000552761 PRG4Q92954 1404 aaPredicted RBP27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms