RNA–Protein interactions for RNA: ENST00000509549.5

C22orf39-204, Transcript of chromosome 22 open reading frame 39, humanhuman

TSL 2

Gene C22orf39, Length 2,979 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C22orf39-204ENST00000509549 NISCHQ9Y2I1 1504 aa27.22■■□□□ 1.95
C22orf39-204ENST00000509549 CCDC180Q9P1Z9 1646 aa23.55■■□□□ 1.36
C22orf39-204ENST00000509549 DCAF8L2P0C7V8 631 aa23.17■■□□□ 1.3
C22orf39-204ENST00000509549 ABCC9O60706 1549 aa22.84■■□□□ 1.25
C22orf39-204ENST00000509549 ZCCHC6Q5VYS8 1495 aaKnown RBP22.79■■□□□ 1.24
C22orf39-204ENST00000509549 SHROOM4Q9ULL8 1493 aa22.65■■□□□ 1.22
C22orf39-204ENST00000509549 DCAF1Q9Y4B6 1507 aa22.28■■□□□ 1.16
C22orf39-204ENST00000509549 NACADO15069 1562 aa22.07■■□□□ 1.12
C22orf39-204ENST00000509549 MYO15BQ96JP2 1530 aa22.01■■□□□ 1.11
C22orf39-204ENST00000509549 SCRIBQ14160 1630 aa22■■□□□ 1.11
C22orf39-204ENST00000509549 RB1CC1Q8TDY2 1594 aa21.96■■□□□ 1.11
C22orf39-204ENST00000509549 SUPT5HO00267 1087 aaKnown RBP21.79■■□□□ 1.08
C22orf39-204ENST00000509549 PABPN1Q86U42 306 aaKnown RBP eCLIP21.7■■□□□ 1.06
C22orf39-204ENST00000509549 UNC13AQ9UPW8 1703 aa21.5■■□□□ 1.03
C22orf39-204ENST00000509549 CECR2Q9BXF3 1484 aa21.34■■□□□ 1.01
C22orf39-204ENST00000509549 BICRAQ9NZM4 1560 aa21.31■■□□□ 1
C22orf39-204ENST00000509549 RSF1Q96T23 1441 aaPredicted RBP21.19■□□□□ 0.98
C22orf39-204ENST00000509549 MROH2BQ7Z745 1585 aa21.13■□□□□ 0.97
C22orf39-204ENST00000509549 BAZ1AQ9NRL2 1556 aaPredicted RBP21■□□□□ 0.95
C22orf39-204ENST00000509549 WIZO95785 1651 aa20.95■□□□□ 0.94
C22orf39-204ENST00000509549 SMARCA4P51532 1647 aa20.92■□□□□ 0.94
C22orf39-204ENST00000509549 SLC24A1O60721 1099 aa20.81■□□□□ 0.92
C22orf39-204ENST00000509549 EIF4G1Q04637 1599 aaKnown RBP20.73■□□□□ 0.91
C22orf39-204ENST00000509549 ATAD2BQ9ULI0 1458 aa20.67■□□□□ 0.9
C22orf39-204ENST00000509549 CHIC1Q5VXU3 224 aa20.6■□□□□ 0.89
C22orf39-204ENST00000509549 BAZ1BQ9UIG0 1483 aaKnown RBP20.59■□□□□ 0.89
C22orf39-204ENST00000509549 TOP2AP11388 1531 aaKnown RBP20.59■□□□□ 0.89
C22orf39-204ENST00000509549 SMARCA2P51531 1590 aa20.57■□□□□ 0.88
C22orf39-204ENST00000509549 CCDC88BA6NC98 1476 aa20.53■□□□□ 0.88
C22orf39-204ENST00000509549 PEG3Q9GZU2 1588 aa20.51■□□□□ 0.87
C22orf39-204ENST00000509549 CC2D2AQ9P2K1 1620 aa20.48■□□□□ 0.87
C22orf39-204ENST00000509549 NCAPD3P42695 1498 aa20.44■□□□□ 0.86
C22orf39-204ENST00000509549 PELP1Q8IZL8 1130 aaKnown RBP20.42■□□□□ 0.86
C22orf39-204ENST00000509549 MYT1Q01538 1121 aa20.41■□□□□ 0.86
C22orf39-204ENST00000509549 TRIM41Q8WV44 630 aa20.35■□□□□ 0.85
C22orf39-204ENST00000509549 DNAJC5BQ9UF47 199 aa20.35■□□□□ 0.85
C22orf39-204ENST00000509549 HMGXB3Q12766 1538 aa20.31■□□□□ 0.84
C22orf39-204ENST00000509549 FAM9AQ8IZU1 332 aaPredicted RBP20.2■□□□□ 0.82
C22orf39-204ENST00000509549 ABCC8Q09428 1581 aa20.15■□□□□ 0.82
C22orf39-204ENST00000509549 EHMT2Q96KQ7 1210 aa20.1■□□□□ 0.81
C22orf39-204ENST00000509549 CADPSQ9ULU8 1353 aa20.03■□□□□ 0.8
C22orf39-204ENST00000509549 LOC105371045A0A1W2PR82 267 aa20.01■□□□□ 0.79
C22orf39-204ENST00000509549 NESP48681 1621 aa20■□□□□ 0.79
C22orf39-204ENST00000509549 CFTRP13569 1480 aa19.99■□□□□ 0.79
C22orf39-204ENST00000509549 WRNQ14191 1432 aaPredicted RBP eCLIP19.97■□□□□ 0.795e-6■■□□□ 12.5
C22orf39-204ENST00000509549 TTBK1Q5TCY1 1321 aaPredicted RBP19.97■□□□□ 0.79
C22orf39-204ENST00000509549 PRKCSHP14314 528 aaPredicted RBP19.95■□□□□ 0.78
C22orf39-204ENST00000509549 SYNJ1O43426 1573 aa19.83■□□□□ 0.76
C22orf39-204ENST00000509549 FANCD2Q9BXW9 1451 aa19.81■□□□□ 0.76
C22orf39-204ENST00000509549 SOGA1O94964 1423 aa19.79■□□□□ 0.76
C22orf39-204ENST00000509549 RUSC2Q8N2Y8 1516 aa19.74■□□□□ 0.75
C22orf39-204ENST00000509549 CUX1P39880 1505 aa19.73■□□□□ 0.75
C22orf39-204ENST00000509549 LAMC3Q9Y6N6 1575 aa19.71■□□□□ 0.75
C22orf39-204ENST00000509549 PDS5BQ9NTI5 1447 aa19.71■□□□□ 0.75
C22orf39-204ENST00000509549 PRDM2Q13029 1718 aa19.67■□□□□ 0.74
C22orf39-204ENST00000509549 CEP164Q9UPV0 1460 aa19.67■□□□□ 0.74
C22orf39-204ENST00000509549 CSRNP3Q8WYN3 585 aa19.66■□□□□ 0.74
C22orf39-204ENST00000509549 TOP2BQ02880 1626 aa19.66■□□□□ 0.74
C22orf39-204ENST00000509549 UBTFP17480 764 aaKnown RBP19.58■□□□□ 0.73
C22orf39-204ENST00000509549 KIF21AQ7Z4S6 1674 aa19.58■□□□□ 0.72
C22orf39-204ENST00000509549 ERCC6Q03468 1493 aa19.57■□□□□ 0.72
C22orf39-204ENST00000509549 FGD5Q6ZNL6 1462 aa19.57■□□□□ 0.72
C22orf39-204ENST00000509549 BIVM-ERCC5R4GMW8 1640 aa19.57■□□□□ 0.72
C22orf39-204ENST00000509549 APLP2Q06481 763 aa19.56■□□□□ 0.72
C22orf39-204ENST00000509549 TOPBP1Q92547 1522 aa19.55■□□□□ 0.72
C22orf39-204ENST00000509549 URB2Q14146 1524 aaKnown RBP19.54■□□□□ 0.72
C22orf39-204ENST00000509549 RAD54L2Q9Y4B4 1467 aa19.53■□□□□ 0.72
C22orf39-204ENST00000509549 RANGAP1P46060 587 aaPredicted RBP19.53■□□□□ 0.72
C22orf39-204ENST00000509549 CUX2O14529 1486 aa19.49■□□□□ 0.71
C22orf39-204ENST00000509549 DNMBPQ6XZF7 1577 aa19.48■□□□□ 0.71
C22orf39-204ENST00000509549 EEA1Q15075 1411 aa19.47■□□□□ 0.71
C22orf39-204ENST00000509549 POLA1P09884 1462 aaPredicted RBP19.47■□□□□ 0.71
C22orf39-204ENST00000509549 KIF27Q86VH2 1401 aa19.46■□□□□ 0.71
C22orf39-204ENST00000509549 ERICH6Q7L0X2 663 aa19.44■□□□□ 0.7
C22orf39-204ENST00000509549 TDRD9Q8NDG6 1382 aaKnown RBP19.43■□□□□ 0.7
C22orf39-204ENST00000509549 DAXXQ9UER7 740 aaPredicted RBP19.41■□□□□ 0.7
C22orf39-204ENST00000509549 MRC2Q9UBG0 1479 aa19.4■□□□□ 0.7
C22orf39-204ENST00000509549 HRCP23327 699 aa19.36■□□□□ 0.69
C22orf39-204ENST00000509549 RAPGEF2Q9Y4G8 1499 aa19.34■□□□□ 0.69
C22orf39-204ENST00000509549 IGF1RP08069 1367 aa19.33■□□□□ 0.69
C22orf39-204ENST00000509549 GOLGA3Q08378 1498 aa19.31■□□□□ 0.68
C22orf39-204ENST00000509549 ABCA10Q8WWZ4 1543 aa19.28■□□□□ 0.68
C22orf39-204ENST00000509549 AQRO60306 1485 aaKnown RBP eCLIP19.27■□□□□ 0.672e-7■■■■■ 27.1
C22orf39-204ENST00000509549 CARMIL1Q5VZK9 1371 aa19.27■□□□□ 0.67
C22orf39-204ENST00000509549 TNIKQ9UKE5 1360 aa19.25■□□□□ 0.67
C22orf39-204ENST00000509549 PPARGC1BQ86YN6 1023 aaKnown RBP19.24■□□□□ 0.67
C22orf39-204ENST00000509549 GAPVD1Q14C86 1478 aa19.22■□□□□ 0.67
C22orf39-204ENST00000509549 PRXQ9BXM0 1461 aa19.22■□□□□ 0.67
C22orf39-204ENST00000509549 WDR62O43379 1518 aa19.22■□□□□ 0.67
C22orf39-204ENST00000509549 CEP162Q5TB80 1403 aa19.21■□□□□ 0.67
C22orf39-204ENST00000509549 ZNF608Q9ULD9 1512 aaPredicted RBP19.21■□□□□ 0.67
C22orf39-204ENST00000509549 KIF21BO75037 1637 aa19.19■□□□□ 0.66
C22orf39-204ENST00000509549 THOC2Q8NI27 1593 aaKnown RBP19.18■□□□□ 0.66
C22orf39-204ENST00000509549 PCGF6Q9BYE7 350 aa19.17■□□□□ 0.66
C22orf39-204ENST00000509549 TARBP1Q13395 1621 aaKnown RBP19.17■□□□□ 0.66
C22orf39-204ENST00000509549 FBLN2P98095 1184 aa19.16■□□□□ 0.66
C22orf39-204ENST00000509549 IFT140Q96RY7 1462 aa19.14■□□□□ 0.65
C22orf39-204ENST00000509549 CLIP1P30622 1438 aa19.1■□□□□ 0.65
C22orf39-204ENST00000509549 P3H3Q8IVL6 736 aa19.1■□□□□ 0.65
C22orf39-204ENST00000509549 WDR97A6NE52 1622 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms