RNA–Protein interactions for RNA: YER172C

BRR2, Transcript of RNA-dependent ATPase RNA helicase (DEIH box), yeastyeast

Gene BRR2, Length 6,492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRR2YER172C ALF1P53904 254 aa1.82□□□□□ -2.12
BRR2YER172C YNL035CP53962 389 aaKnown RBP1.82□□□□□ -2.12
BRR2YER172C YRR1Q12172 810 aa1.82□□□□□ -2.12
BRR2YER172C YOR131CQ12486 218 aa1.82□□□□□ -2.12
BRR2YER172C AVL9Q12500 764 aa1.82□□□□□ -2.12
BRR2YER172C POX1P13711 748 aa1.81□□□□□ -2.12
BRR2YER172C RRP14P36080 434 aaKnown RBP1.81□□□□□ -2.12
BRR2YER172C PCM1P38628 557 aaKnown RBP1.81□□□□□ -2.12
BRR2YER172C VTC2P43585 828 aa1.81□□□□□ -2.12
BRR2YER172C PEX29Q03370 554 aa1.81□□□□□ -2.12
BRR2YER172C PUF6Q04373 656 aaKnown RBP1.81□□□□□ -2.12
BRR2YER172C PGK1P00560 416 aaKnown RBP1.81□□□□□ -2.12
BRR2YER172C LDH1P38139 375 aa1.81□□□□□ -2.12
BRR2YER172C AXL2P38928 823 aa1.81□□□□□ -2.12
BRR2YER172C ALG2P43636 503 aa1.81□□□□□ -2.12
BRR2YER172C SIZ1Q04195 904 aa1.81□□□□□ -2.12
BRR2YER172C YLR413WQ06689 675 aa1.81□□□□□ -2.12
BRR2YER172C CFT2Q12102 859 aaPredicted RBP1.81□□□□□ -2.12
BRR2YER172C CPA2P03965 1118 aaKnown RBP1.81□□□□□ -2.12
BRR2YER172C VPS1P21576 704 aaKnown RBP1.81□□□□□ -2.12
BRR2YER172C UBX7P38349 436 aa1.81□□□□□ -2.12
BRR2YER172C STM1P39015 273 aaKnown RBP1.81□□□□□ -2.12
BRR2YER172C VID27P40157 782 aa1.81□□□□□ -2.12
BRR2YER172C RSC1P53236 928 aa1.81□□□□□ -2.12
BRR2YER172C PIB1Q06651 286 aa1.81□□□□□ -2.12
BRR2YER172C FLC1Q08967 793 aa1.81□□□□□ -2.12
BRR2YER172C YPL260WQ08977 551 aa1.81□□□□□ -2.12
BRR2YER172C YDL206WQ12424 762 aa1.81□□□□□ -2.12
BRR2YER172C SEC23P15303 768 aaKnown RBP1.81□□□□□ -2.12
BRR2YER172C SRP40P32583 406 aaPredicted RBP1.81□□□□□ -2.12
BRR2YER172C COT1P32798 439 aa1.81□□□□□ -2.12
BRR2YER172C ASH1P34233 588 aa1.81□□□□□ -2.12
BRR2YER172C BUD16P39988 312 aa1.81□□□□□ -2.12
BRR2YER172C HOS4P40480 1083 aa1.81□□□□□ -2.12
BRR2YER172C JJJ2P46997 583 aa1.81□□□□□ -2.12
BRR2YER172C TDA7P53882 636 aaPredicted RBP1.81□□□□□ -2.12
BRR2YER172C VTC3Q02725 835 aa1.81□□□□□ -2.12
BRR2YER172C POB3Q04636 552 aaKnown RBP1.81□□□□□ -2.12
BRR2YER172C CSC1Q06538 782 aa1.81□□□□□ -2.12
BRR2YER172C TFB4Q12004 338 aa1.81□□□□□ -2.12
BRR2YER172C NCB2Q92317 146 aa1.81□□□□□ -2.12
BRR2YER172C RNR2P09938 399 aaKnown RBP1.81□□□□□ -2.12
BRR2YER172C IXR1P33417 597 aa1.81□□□□□ -2.12
BRR2YER172C TVP38P36164 337 aa1.81□□□□□ -2.12
BRR2YER172C PSY4P38193 441 aa1.81□□□□□ -2.12
BRR2YER172C VAB2P40003 282 aa1.81□□□□□ -2.12
BRR2YER172C DSE1P40077 573 aa1.81□□□□□ -2.12
BRR2YER172C EFM4P40516 257 aa1.81□□□□□ -2.12
BRR2YER172C JJJ3P47138 172 aa1.81□□□□□ -2.12
BRR2YER172C MNP1P53163 194 aaPredicted RBP1.81□□□□□ -2.12
BRR2YER172C YNL108CP53929 270 aa1.81□□□□□ -2.12
BRR2YER172C BOP3P53958 396 aa1.81□□□□□ -2.12
BRR2YER172C YOR111WQ99210 232 aa1.81□□□□□ -2.12
BRR2YER172C SMY2P32909 740 aaKnown RBP1.8□□□□□ -2.12
BRR2YER172C RPN3P40016 523 aaKnown RBP1.8□□□□□ -2.12
BRR2YER172C PSF2P40359 213 aa1.8□□□□□ -2.12
BRR2YER172C OPT1P40897 799 aa1.8□□□□□ -2.12
BRR2YER172C YDL129WQ07555 291 aa1.8□□□□□ -2.12
BRR2YER172C YLL058WQ12198 575 aa1.8□□□□□ -2.12
BRR2YER172C SUT2Q12286 268 aa1.8□□□□□ -2.12
BRR2YER172C CDC19P00549 500 aaKnown RBP1.8□□□□□ -2.12
BRR2YER172C VPS8P39702 1274 aa1.8□□□□□ -2.12
BRR2YER172C CTR1P49573 406 aa1.8□□□□□ -2.12
BRR2YER172C BRE5P53741 515 aaKnown RBP1.8□□□□□ -2.12
BRR2YER172C SYH1Q02875 849 aaKnown RBP1.8□□□□□ -2.12
BRR2YER172C EAR1Q03212 550 aa1.8□□□□□ -2.12
BRR2YER172C YLR257WQ06146 321 aaKnown RBP1.8□□□□□ -2.12
BRR2YER172C SWI6P09959 803 aa1.8□□□□□ -2.12
BRR2YER172C FRS2P15625 503 aaKnown RBP1.8□□□□□ -2.12
BRR2YER172C YER186CP40101 306 aa1.8□□□□□ -2.12
BRR2YER172C NUP42P49686 430 aaKnown RBP1.8□□□□□ -2.12
BRR2YER172C YAF9P53930 226 aa1.8□□□□□ -2.12
BRR2YER172C YPL034WQ03083 165 aa1.8□□□□□ -2.12
BRR2YER172C ARP6Q12509 438 aa1.8□□□□□ -2.12
BRR2YER172C PSE1P32337 1089 aaKnown RBP1.8□□□□□ -2.12
BRR2YER172C SMC1P32908 1225 aa1.8□□□□□ -2.12
BRR2YER172C BUD2P33314 1104 aa1.8□□□□□ -2.12
BRR2YER172C TTI1P36097 1038 aa1.8□□□□□ -2.12
BRR2YER172C GPT2P36148 743 aa1.8□□□□□ -2.12
BRR2YER172C RFS1P38234 210 aaKnown RBP1.8□□□□□ -2.12
BRR2YER172C ERP2P39704 215 aa1.8□□□□□ -2.12
BRR2YER172C SHE10P53075 577 aa1.8□□□□□ -2.12
BRR2YER172C MAG2Q06436 670 aaKnown RBP1.8□□□□□ -2.12
BRR2YER172C COX11P19516 300 aaKnown RBP1.8□□□□□ -2.12
BRR2YER172C AFT1P22149 690 aa1.8□□□□□ -2.12
BRR2YER172C TSR4P25040 408 aa1.8□□□□□ -2.12
BRR2YER172C PUF4P25339 888 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
BRR2YER172C SPT5P27692 1063 aaKnown RBP1.8□□□□□ -2.12
BRR2YER172C SHM1P37292 490 aaPredicted RBP1.8□□□□□ -2.12
BRR2YER172C NPP2P39997 493 aa1.8□□□□□ -2.12
BRR2YER172C OSW7P43611 510 aa1.8□□□□□ -2.12
BRR2YER172C YJR107WP47145 328 aa1.8□□□□□ -2.12
BRR2YER172C GRX8Q05926 109 aa1.8□□□□□ -2.12
BRR2YER172C TRM11Q12463 433 aa1.8□□□□□ -2.12
BRR2YER172C SPT2P06843 333 aaPredicted RBP1.79□□□□□ -2.12
BRR2YER172C DSS4P32601 143 aa1.79□□□□□ -2.12
BRR2YER172C TFC4P33339 1025 aa1.79□□□□□ -2.12
BRR2YER172C YHR054CP38780 354 aa1.79□□□□□ -2.12
BRR2YER172C SAP1P39955 897 aaKnown RBP1.79□□□□□ -2.12
BRR2YER172C FIR1P40020 876 aa1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms