Protein–RNA interactions for Protein: P43585

VTC2, Vacuolar transporter chaperone 2, yeastyeast

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTC2P43585 YML009W-BYML009W-B 477 nt22.71■■□□□ 1.23
VTC2P43585 NSR1YGR159C 1245 nt22.61■■□□□ 1.21
VTC2P43585 NOP1YDL014W 984 nt22.03■■□□□ 1.12
VTC2P43585 YKL036CYKL036C 393 nt20.24■□□□□ 0.83
VTC2P43585 MDJ1YFL016C 1536 nt20.18■□□□□ 0.82
VTC2P43585 SRX1YKL086W 384 nt19.23■□□□□ 0.67
VTC2P43585 Q0297Q0297 156 nt19.22■□□□□ 0.67
VTC2P43585 YJL027CYJL027C 417 nt18.91■□□□□ 0.62
VTC2P43585 SCS3YGL126W 1143 nt18.36■□□□□ 0.53
VTC2P43585 YCR051WYCR051W 669 nt18.29■□□□□ 0.52
VTC2P43585 DBP2YNL112W 1641 nt17.79■□□□□ 0.44
VTC2P43585 YOL085CYOL085C 342 nt17.53■□□□□ 0.4
VTC2P43585 TRN1tP(UGG)A 72 nt17.42■□□□□ 0.38
VTC2P43585 SUF9tP(UGG)F 72 nt17.42■□□□□ 0.38
VTC2P43585 SUF8tP(UGG)H 72 nt17.42■□□□□ 0.38
VTC2P43585 tP(UGG)LtP(UGG)L 72 nt17.42■□□□□ 0.38
VTC2P43585 SUF7tP(UGG)M 72 nt17.42■□□□□ 0.38
VTC2P43585 tP(UGG)N1tP(UGG)N1 72 nt17.42■□□□□ 0.38
VTC2P43585 tP(UGG)N2tP(UGG)N2 72 nt17.42■□□□□ 0.38
VTC2P43585 tP(UGG)O1tP(UGG)O1 72 nt17.42■□□□□ 0.38
VTC2P43585 SUF11tP(UGG)O2 72 nt17.42■□□□□ 0.38
VTC2P43585 CCC1YLR220W 969 nt17.33■□□□□ 0.36
VTC2P43585 PKP1YIL042C 1185 nt17.32■□□□□ 0.36
VTC2P43585 RPP1BYDL130W 321 nt17.27■□□□□ 0.36
VTC2P43585 YBR190WYBR190W 312 nt17.21■□□□□ 0.35
VTC2P43585 RTC3YHR087W 336 nt16.89■□□□□ 0.29
VTC2P43585 RVS167YDR388W 1449 nt16.75■□□□□ 0.27
VTC2P43585 SCJ1YMR214W 1134 nt16.6■□□□□ 0.25
VTC2P43585 PET122YER153C 765 nt16.51■□□□□ 0.23
VTC2P43585 tP(UGG)O3tP(UGG)O3 72 nt16.48■□□□□ 0.23
VTC2P43585 ATS1YAL020C 1002 nt16.41■□□□□ 0.22
VTC2P43585 SCR1SCR1 522 nt16.34■□□□□ 0.21
VTC2P43585 SHR5YOL110W 714 nt16.12■□□□□ 0.17
VTC2P43585 RRN5YLR141W 1092 nt16.05■□□□□ 0.16
VTC2P43585 YDJ1YNL064C 1230 nt15.92■□□□□ 0.14
VTC2P43585 DEP1YAL013W 1218 nt15.75■□□□□ 0.11
VTC2P43585 URN1YPR152C 1398 nt15.75■□□□□ 0.11
VTC2P43585 YER088W-BYER088W-B 147 nt15.72■□□□□ 0.11
VTC2P43585 RSB1YOR049C 1065 nt15.7■□□□□ 0.1
VTC2P43585 PUT4YOR348C 1884 nt15.68■□□□□ 0.1
VTC2P43585 GAR1YHR089C 618 nt15.63■□□□□ 0.09
VTC2P43585 OPI9YLR338W 858 nt15.51■□□□□ 0.07
VTC2P43585 RPN10YHR200W 807 nt15.48■□□□□ 0.07
VTC2P43585 SAH1YER043C 1350 nt15.46■□□□□ 0.07
VTC2P43585 YNL208WYNL208W 600 nt15.45■□□□□ 0.06
VTC2P43585 SSA3YBL075C 1950 nt15.44■□□□□ 0.06
VTC2P43585 ARE1YCR048W 1833 nt15.38■□□□□ 0.05
VTC2P43585 POA1YBR022W 534 nt15.23■□□□□ 0.03
VTC2P43585 PST2YDR032C 597 nt15.2■□□□□ 0.02
VTC2P43585 YHR049C-AYHR049C-A 297 nt15.2■□□□□ 0.02
VTC2P43585 TIR1YER011W 765 nt15.09■□□□□ 0.01
VTC2P43585 PUN1YLR414C 792 nt15.06■□□□□ 0
VTC2P43585 YJR018WYJR018W 363 nt15.02■□□□□ -0
VTC2P43585 SSA1YAL005C 1929 nt14.92□□□□□ -0.02
VTC2P43585 PTC2YER089C 1395 nt14.92□□□□□ -0.02
VTC2P43585 BUD23YCR047C 828 nt14.89□□□□□ -0.03
VTC2P43585 BSC6YOL137W 1494 nt14.89□□□□□ -0.03
VTC2P43585 NAB2YGL122C 1578 nt14.72□□□□□ -0.05
VTC2P43585 YJR120WYJR120W 351 nt14.71□□□□□ -0.05
VTC2P43585 RPP2BYDR382W 333 nt14.7□□□□□ -0.06
VTC2P43585 SRB2YHR041C 633 nt14.64□□□□□ -0.07
VTC2P43585 YKL097CYKL097C 411 nt14.62□□□□□ -0.07
VTC2P43585 SHU1YHL006C 453 nt14.61□□□□□ -0.07
VTC2P43585 FPR4YLR449W 1179 nt14.54□□□□□ -0.08
VTC2P43585 DAL1YIR027C 1383 nt14.51□□□□□ -0.09
VTC2P43585 INM2YDR287W 879 nt14.48□□□□□ -0.09
VTC2P43585 FIS1YIL065C 468 nt14.46□□□□□ -0.09
VTC2P43585 YAL037C-BYAL037C-B 975 nt14.46□□□□□ -0.09
VTC2P43585 WWM1YFL010C 636 nt14.42□□□□□ -0.1
VTC2P43585 BDH2YAL061W 1254 nt14.37□□□□□ -0.11
VTC2P43585 PHO4YFR034C 939 nt14.36□□□□□ -0.11
VTC2P43585 YBL100CYBL100C 315 nt14.34□□□□□ -0.11
VTC2P43585 YGR021WYGR021W 873 nt14.29□□□□□ -0.12
VTC2P43585 HOM6YJR139C 1080 nt14.23□□□□□ -0.13
VTC2P43585 SPT5YML010W 3192 nt14.17□□□□□ -0.14
VTC2P43585 MNP1YGL068W 585 nt14.17□□□□□ -0.14
VTC2P43585 FUN26YAL022C 1554 nt14.17□□□□□ -0.14
VTC2P43585 YFL021C-AYFL021C-A 855 nt14.16□□□□□ -0.14
VTC2P43585 LSM3YLR438C-A 270 nt14.16□□□□□ -0.14
VTC2P43585 TRM9YML014W 840 nt14.14□□□□□ -0.15
VTC2P43585 YPS1YLR120C 1710 nt14.11□□□□□ -0.15
VTC2P43585 RKM5YLR137W 1104 nt14.02□□□□□ -0.17
VTC2P43585 YHR165W-AYHR165W-A 312 nt14□□□□□ -0.17
VTC2P43585 ALF1YNL148C 765 nt14□□□□□ -0.17
VTC2P43585 YDR095CYDR095C 411 nt13.99□□□□□ -0.17
VTC2P43585 YOR139CYOR139C 393 nt13.98□□□□□ -0.17
VTC2P43585 MEP2YNL142W 1500 nt13.97□□□□□ -0.17
VTC2P43585 CCT6YDR188W 1641 nt13.96□□□□□ -0.17
VTC2P43585 NPL3YDR432W 1245 nt13.92□□□□□ -0.18
VTC2P43585 SUF2tP(AGG)C 72 nt13.87□□□□□ -0.19
VTC2P43585 SUF10tP(AGG)N 72 nt13.87□□□□□ -0.19
VTC2P43585 YOL037CYOL037C 354 nt13.87□□□□□ -0.19
VTC2P43585 DCW1YKL046C 1350 nt13.77□□□□□ -0.21
VTC2P43585 RPP2AYOL039W 321 nt13.76□□□□□ -0.21
VTC2P43585 SIS1YNL007C 1059 nt13.75□□□□□ -0.21
VTC2P43585 SSA4YER103W 1929 nt13.72□□□□□ -0.21
VTC2P43585 Q0182Q0182 405 nt13.7□□□□□ -0.22
VTC2P43585 PTP1YDL230W 1008 nt13.68□□□□□ -0.22
VTC2P43585 CAC2YML102W 1407 nt13.61□□□□□ -0.23
VTC2P43585 EMI2YDR516C 1503 nt13.59□□□□□ -0.23
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms