Protein–RNA interactions for Protein: Q08977

YPL260W, UPF0662 protein YPL260W, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPL260WQ08977 YML009W-BYML009W-B 477 nt24.02■■□□□ 1.44
YPL260WQ08977 NSR1YGR159C 1245 nt23.66■■□□□ 1.38
YPL260WQ08977 NOP1YDL014W 984 nt23.44■■□□□ 1.34
YPL260WQ08977 YKL036CYKL036C 393 nt21.85■■□□□ 1.09
YPL260WQ08977 MDJ1YFL016C 1536 nt20.79■□□□□ 0.92
YPL260WQ08977 Q0297Q0297 156 nt20.59■□□□□ 0.89
YPL260WQ08977 SRX1YKL086W 384 nt20.48■□□□□ 0.87
YPL260WQ08977 YJL027CYJL027C 417 nt20.44■□□□□ 0.86
YPL260WQ08977 SCS3YGL126W 1143 nt20■□□□□ 0.79
YPL260WQ08977 YCR051WYCR051W 669 nt19.46■□□□□ 0.71
YPL260WQ08977 YOL085CYOL085C 342 nt18.92■□□□□ 0.62
YPL260WQ08977 PKP1YIL042C 1185 nt18.61■□□□□ 0.57
YPL260WQ08977 RPP1BYDL130W 321 nt18.48■□□□□ 0.55
YPL260WQ08977 DBP2YNL112W 1641 nt18.48■□□□□ 0.55
YPL260WQ08977 TRN1tP(UGG)A 72 nt18.38■□□□□ 0.53
YPL260WQ08977 SUF9tP(UGG)F 72 nt18.38■□□□□ 0.53
YPL260WQ08977 SUF8tP(UGG)H 72 nt18.38■□□□□ 0.53
YPL260WQ08977 tP(UGG)LtP(UGG)L 72 nt18.38■□□□□ 0.53
YPL260WQ08977 SUF7tP(UGG)M 72 nt18.38■□□□□ 0.53
YPL260WQ08977 tP(UGG)N1tP(UGG)N1 72 nt18.38■□□□□ 0.53
YPL260WQ08977 tP(UGG)N2tP(UGG)N2 72 nt18.38■□□□□ 0.53
YPL260WQ08977 tP(UGG)O1tP(UGG)O1 72 nt18.38■□□□□ 0.53
YPL260WQ08977 SUF11tP(UGG)O2 72 nt18.38■□□□□ 0.53
YPL260WQ08977 CCC1YLR220W 969 nt18.21■□□□□ 0.51
YPL260WQ08977 SCJ1YMR214W 1134 nt17.99■□□□□ 0.47
YPL260WQ08977 ATS1YAL020C 1002 nt17.95■□□□□ 0.46
YPL260WQ08977 YBR190WYBR190W 312 nt17.67■□□□□ 0.42
YPL260WQ08977 PET122YER153C 765 nt17.63■□□□□ 0.41
YPL260WQ08977 SCR1SCR1 522 nt17.51■□□□□ 0.39
YPL260WQ08977 tP(UGG)O3tP(UGG)O3 72 nt17.47■□□□□ 0.39
YPL260WQ08977 RVS167YDR388W 1449 nt17.45■□□□□ 0.38
YPL260WQ08977 RTC3YHR087W 336 nt17.3■□□□□ 0.36
YPL260WQ08977 RRN5YLR141W 1092 nt17.15■□□□□ 0.34
YPL260WQ08977 YDJ1YNL064C 1230 nt16.89■□□□□ 0.29
YPL260WQ08977 SHR5YOL110W 714 nt16.89■□□□□ 0.29
YPL260WQ08977 RSB1YOR049C 1065 nt16.87■□□□□ 0.29
YPL260WQ08977 YER088W-BYER088W-B 147 nt16.81■□□□□ 0.28
YPL260WQ08977 PST2YDR032C 597 nt16.58■□□□□ 0.24
YPL260WQ08977 GAR1YHR089C 618 nt16.49■□□□□ 0.23
YPL260WQ08977 DEP1YAL013W 1218 nt16.35■□□□□ 0.21
YPL260WQ08977 URN1YPR152C 1398 nt16.27■□□□□ 0.2
YPL260WQ08977 YNL208WYNL208W 600 nt16.1■□□□□ 0.17
YPL260WQ08977 RPN10YHR200W 807 nt16.09■□□□□ 0.17
YPL260WQ08977 YKL097CYKL097C 411 nt16.05■□□□□ 0.16
YPL260WQ08977 OPI9YLR338W 858 nt15.99■□□□□ 0.15
YPL260WQ08977 TIR1YER011W 765 nt15.92■□□□□ 0.14
YPL260WQ08977 SHU1YHL006C 453 nt15.86■□□□□ 0.13
YPL260WQ08977 PUT4YOR348C 1884 nt15.84■□□□□ 0.13
YPL260WQ08977 SAH1YER043C 1350 nt15.83■□□□□ 0.12
YPL260WQ08977 SSA1YAL005C 1929 nt15.68■□□□□ 0.1
YPL260WQ08977 ARE1YCR048W 1833 nt15.64■□□□□ 0.09
YPL260WQ08977 YAL037C-BYAL037C-B 975 nt15.55■□□□□ 0.08
YPL260WQ08977 YJR018WYJR018W 363 nt15.54■□□□□ 0.08
YPL260WQ08977 PUN1YLR414C 792 nt15.53■□□□□ 0.08
YPL260WQ08977 SRB2YHR041C 633 nt15.47■□□□□ 0.07
YPL260WQ08977 YHR049C-AYHR049C-A 297 nt15.45■□□□□ 0.06
YPL260WQ08977 POA1YBR022W 534 nt15.39■□□□□ 0.05
YPL260WQ08977 YOR139CYOR139C 393 nt15.37■□□□□ 0.05
YPL260WQ08977 YJR120WYJR120W 351 nt15.34■□□□□ 0.05
YPL260WQ08977 RPP2BYDR382W 333 nt15.3■□□□□ 0.04
YPL260WQ08977 PTC2YER089C 1395 nt15.3■□□□□ 0.04
YPL260WQ08977 WWM1YFL010C 636 nt15.26■□□□□ 0.03
YPL260WQ08977 YGR021WYGR021W 873 nt15.24■□□□□ 0.03
YPL260WQ08977 HOM6YJR139C 1080 nt15.2■□□□□ 0.02
YPL260WQ08977 NPL3YDR432W 1245 nt15.19■□□□□ 0.02
YPL260WQ08977 MNP1YGL068W 585 nt15.17■□□□□ 0.02
YPL260WQ08977 BUD23YCR047C 828 nt15.12■□□□□ 0.01
YPL260WQ08977 NAB2YGL122C 1578 nt15.06■□□□□ 0
YPL260WQ08977 BDH2YAL061W 1254 nt15.03■□□□□ -0
YPL260WQ08977 YFL021C-AYFL021C-A 855 nt15.01□□□□□ -0.01
YPL260WQ08977 BSC6YOL137W 1494 nt15.01□□□□□ -0.01
YPL260WQ08977 YOL037CYOL037C 354 nt15□□□□□ -0.01
YPL260WQ08977 RKM5YLR137W 1104 nt14.98□□□□□ -0.01
YPL260WQ08977 SSA3YBL075C 1950 nt14.97□□□□□ -0.01
YPL260WQ08977 INM2YDR287W 879 nt14.95□□□□□ -0.02
YPL260WQ08977 DAL1YIR027C 1383 nt14.92□□□□□ -0.02
YPL260WQ08977 FPR4YLR449W 1179 nt14.9□□□□□ -0.02
YPL260WQ08977 FIS1YIL065C 468 nt14.88□□□□□ -0.03
YPL260WQ08977 LSM3YLR438C-A 270 nt14.88□□□□□ -0.03
YPL260WQ08977 YBL100CYBL100C 315 nt14.86□□□□□ -0.03
YPL260WQ08977 PHO4YFR034C 939 nt14.77□□□□□ -0.05
YPL260WQ08977 tM(CAU)CtM(CAU)C 72 nt14.75□□□□□ -0.05
YPL260WQ08977 IMT4tM(CAU)E 72 nt14.75□□□□□ -0.05
YPL260WQ08977 IMT3tM(CAU)J3 72 nt14.75□□□□□ -0.05
YPL260WQ08977 IMT1tM(CAU)O1 72 nt14.75□□□□□ -0.05
YPL260WQ08977 IMT2tM(CAU)P 72 nt14.75□□□□□ -0.05
YPL260WQ08977 TRM9YML014W 840 nt14.71□□□□□ -0.05
YPL260WQ08977 FUN26YAL022C 1554 nt14.68□□□□□ -0.06
YPL260WQ08977 YLR281CYLR281C 468 nt14.64□□□□□ -0.07
YPL260WQ08977 PUS2YGL063W 1113 nt14.58□□□□□ -0.08
YPL260WQ08977 WHI5YOR083W 888 nt14.56□□□□□ -0.08
YPL260WQ08977 CCT6YDR188W 1641 nt14.53□□□□□ -0.08
YPL260WQ08977 ALF1YNL148C 765 nt14.43□□□□□ -0.1
YPL260WQ08977 SUF2tP(AGG)C 72 nt14.4□□□□□ -0.1
YPL260WQ08977 SUF10tP(AGG)N 72 nt14.4□□□□□ -0.1
YPL260WQ08977 YPS1YLR120C 1710 nt14.39□□□□□ -0.11
YPL260WQ08977 YLR154C-GYLR154C-G 150 nt14.37□□□□□ -0.11
YPL260WQ08977 YDR095CYDR095C 411 nt14.34□□□□□ -0.11
YPL260WQ08977 DSK2YMR276W 1122 nt14.28□□□□□ -0.12
YPL260WQ08977 MOT3YMR070W 1473 nt14.27□□□□□ -0.12
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms