Protein–RNA interactions for Protein: P38780

YHR054C, Uncharacterized protein YHR054C, yeastyeast

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YHR054CP38780 YML009W-BYML009W-B 477 nt22.02■■□□□ 1.12
YHR054CP38780 NSR1YGR159C 1245 nt21.7■■□□□ 1.06
YHR054CP38780 NOP1YDL014W 984 nt21.44■■□□□ 1.02
YHR054CP38780 YKL036CYKL036C 393 nt19.93■□□□□ 0.78
YHR054CP38780 MDJ1YFL016C 1536 nt19.16■□□□□ 0.66
YHR054CP38780 Q0297Q0297 156 nt18.8■□□□□ 0.6
YHR054CP38780 SRX1YKL086W 384 nt18.73■□□□□ 0.59
YHR054CP38780 YJL027CYJL027C 417 nt18.66■□□□□ 0.58
YHR054CP38780 SCS3YGL126W 1143 nt18.21■□□□□ 0.51
YHR054CP38780 YCR051WYCR051W 669 nt17.82■□□□□ 0.44
YHR054CP38780 YOL085CYOL085C 342 nt17.25■□□□□ 0.35
YHR054CP38780 PKP1YIL042C 1185 nt17.01■□□□□ 0.31
YHR054CP38780 DBP2YNL112W 1641 nt16.96■□□□□ 0.31
YHR054CP38780 RPP1BYDL130W 321 nt16.88■□□□□ 0.29
YHR054CP38780 TRN1tP(UGG)A 72 nt16.84■□□□□ 0.29
YHR054CP38780 SUF9tP(UGG)F 72 nt16.84■□□□□ 0.29
YHR054CP38780 SUF8tP(UGG)H 72 nt16.84■□□□□ 0.29
YHR054CP38780 tP(UGG)LtP(UGG)L 72 nt16.84■□□□□ 0.29
YHR054CP38780 SUF7tP(UGG)M 72 nt16.84■□□□□ 0.29
YHR054CP38780 tP(UGG)N1tP(UGG)N1 72 nt16.84■□□□□ 0.29
YHR054CP38780 tP(UGG)N2tP(UGG)N2 72 nt16.84■□□□□ 0.29
YHR054CP38780 tP(UGG)O1tP(UGG)O1 72 nt16.84■□□□□ 0.29
YHR054CP38780 SUF11tP(UGG)O2 72 nt16.84■□□□□ 0.29
YHR054CP38780 CCC1YLR220W 969 nt16.72■□□□□ 0.27
YHR054CP38780 ATS1YAL020C 1002 nt16.32■□□□□ 0.2
YHR054CP38780 SCJ1YMR214W 1134 nt16.29■□□□□ 0.2
YHR054CP38780 YBR190WYBR190W 312 nt16.27■□□□□ 0.2
YHR054CP38780 PET122YER153C 765 nt16.13■□□□□ 0.17
YHR054CP38780 RVS167YDR388W 1449 nt16.03■□□□□ 0.16
YHR054CP38780 SCR1SCR1 522 nt16■□□□□ 0.15
YHR054CP38780 tP(UGG)O3tP(UGG)O3 72 nt15.99■□□□□ 0.15
YHR054CP38780 RTC3YHR087W 336 nt15.97■□□□□ 0.15
YHR054CP38780 RRN5YLR141W 1092 nt15.67■□□□□ 0.1
YHR054CP38780 SHR5YOL110W 714 nt15.5■□□□□ 0.07
YHR054CP38780 YDJ1YNL064C 1230 nt15.45■□□□□ 0.06
YHR054CP38780 RSB1YOR049C 1065 nt15.43■□□□□ 0.06
YHR054CP38780 YER088W-BYER088W-B 147 nt15.36■□□□□ 0.05
YHR054CP38780 GAR1YHR089C 618 nt15.13■□□□□ 0.01
YHR054CP38780 PST2YDR032C 597 nt15.08■□□□□ 0
YHR054CP38780 DEP1YAL013W 1218 nt15.04■□□□□ -0
YHR054CP38780 URN1YPR152C 1398 nt14.98□□□□□ -0.01
YHR054CP38780 RPN10YHR200W 807 nt14.8□□□□□ -0.04
YHR054CP38780 YNL208WYNL208W 600 nt14.8□□□□□ -0.04
YHR054CP38780 OPI9YLR338W 858 nt14.71□□□□□ -0.05
YHR054CP38780 PUT4YOR348C 1884 nt14.62□□□□□ -0.07
YHR054CP38780 YKL097CYKL097C 411 nt14.6□□□□□ -0.07
YHR054CP38780 TIR1YER011W 765 nt14.59□□□□□ -0.07
YHR054CP38780 SAH1YER043C 1350 nt14.59□□□□□ -0.07
YHR054CP38780 SHU1YHL006C 453 nt14.45□□□□□ -0.1
YHR054CP38780 ARE1YCR048W 1833 nt14.41□□□□□ -0.1
YHR054CP38780 SSA1YAL005C 1929 nt14.37□□□□□ -0.11
YHR054CP38780 YJR018WYJR018W 363 nt14.3□□□□□ -0.12
YHR054CP38780 PUN1YLR414C 792 nt14.3□□□□□ -0.12
YHR054CP38780 YHR049C-AYHR049C-A 297 nt14.28□□□□□ -0.12
YHR054CP38780 POA1YBR022W 534 nt14.22□□□□□ -0.13
YHR054CP38780 YAL037C-BYAL037C-B 975 nt14.2□□□□□ -0.14
YHR054CP38780 SRB2YHR041C 633 nt14.16□□□□□ -0.14
YHR054CP38780 PTC2YER089C 1395 nt14.1□□□□□ -0.15
YHR054CP38780 YJR120WYJR120W 351 nt14.09□□□□□ -0.15
YHR054CP38780 RPP2BYDR382W 333 nt14.07□□□□□ -0.16
YHR054CP38780 BUD23YCR047C 828 nt13.99□□□□□ -0.17
YHR054CP38780 WWM1YFL010C 636 nt13.98□□□□□ -0.17
YHR054CP38780 YOR139CYOR139C 393 nt13.97□□□□□ -0.17
YHR054CP38780 YGR021WYGR021W 873 nt13.94□□□□□ -0.18
YHR054CP38780 HOM6YJR139C 1080 nt13.89□□□□□ -0.19
YHR054CP38780 BSC6YOL137W 1494 nt13.88□□□□□ -0.19
YHR054CP38780 MNP1YGL068W 585 nt13.88□□□□□ -0.19
YHR054CP38780 NAB2YGL122C 1578 nt13.88□□□□□ -0.19
YHR054CP38780 NPL3YDR432W 1245 nt13.85□□□□□ -0.19
YHR054CP38780 BDH2YAL061W 1254 nt13.79□□□□□ -0.2
YHR054CP38780 INM2YDR287W 879 nt13.76□□□□□ -0.21
YHR054CP38780 FPR4YLR449W 1179 nt13.76□□□□□ -0.21
YHR054CP38780 YFL021C-AYFL021C-A 855 nt13.75□□□□□ -0.21
YHR054CP38780 DAL1YIR027C 1383 nt13.74□□□□□ -0.21
YHR054CP38780 FIS1YIL065C 468 nt13.7□□□□□ -0.22
YHR054CP38780 RKM5YLR137W 1104 nt13.7□□□□□ -0.22
YHR054CP38780 YOL037CYOL037C 354 nt13.69□□□□□ -0.22
YHR054CP38780 YBL100CYBL100C 315 nt13.68□□□□□ -0.22
YHR054CP38780 SSA3YBL075C 1950 nt13.67□□□□□ -0.22
YHR054CP38780 LSM3YLR438C-A 270 nt13.63□□□□□ -0.23
YHR054CP38780 PHO4YFR034C 939 nt13.61□□□□□ -0.23
YHR054CP38780 TRM9YML014W 840 nt13.51□□□□□ -0.25
YHR054CP38780 FUN26YAL022C 1554 nt13.5□□□□□ -0.25
YHR054CP38780 tM(CAU)CtM(CAU)C 72 nt13.4□□□□□ -0.26
YHR054CP38780 IMT4tM(CAU)E 72 nt13.4□□□□□ -0.26
YHR054CP38780 IMT3tM(CAU)J3 72 nt13.4□□□□□ -0.26
YHR054CP38780 IMT1tM(CAU)O1 72 nt13.4□□□□□ -0.26
YHR054CP38780 IMT2tM(CAU)P 72 nt13.4□□□□□ -0.26
YHR054CP38780 YLR281CYLR281C 468 nt13.34□□□□□ -0.27
YHR054CP38780 CCT6YDR188W 1641 nt13.34□□□□□ -0.27
YHR054CP38780 ALF1YNL148C 765 nt13.31□□□□□ -0.28
YHR054CP38780 PUS2YGL063W 1113 nt13.3□□□□□ -0.28
YHR054CP38780 WHI5YOR083W 888 nt13.3□□□□□ -0.28
YHR054CP38780 YPS1YLR120C 1710 nt13.26□□□□□ -0.29
YHR054CP38780 SUF2tP(AGG)C 72 nt13.24□□□□□ -0.29
YHR054CP38780 SUF10tP(AGG)N 72 nt13.24□□□□□ -0.29
YHR054CP38780 YDR095CYDR095C 411 nt13.22□□□□□ -0.29
YHR054CP38780 YHR165W-AYHR165W-A 312 nt13.16□□□□□ -0.3
YHR054CP38780 YLR154C-GYLR154C-G 150 nt13.16□□□□□ -0.3
YHR054CP38780 YJL152WYJL152W 360 nt13.05□□□□□ -0.32
Retrieved 100 of 7,029 protein–RNA pairs in 7.2 ms