Protein–RNA interactions for Protein: P53904

ALF1, Tubulin-specific chaperone B, yeastyeast

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ALF1P53904 NSR1YGR159C 1245 nt21.86■■□□□ 1.09
ALF1P53904 YML009W-BYML009W-B 477 nt21.69■■□□□ 1.06
ALF1P53904 NOP1YDL014W 984 nt20.86■□□□□ 0.93
ALF1P53904 MDJ1YFL016C 1536 nt19.88■□□□□ 0.77
ALF1P53904 YKL036CYKL036C 393 nt18.85■□□□□ 0.61
ALF1P53904 YJL027CYJL027C 417 nt18.3■□□□□ 0.52
ALF1P53904 SRX1YKL086W 384 nt18.21■□□□□ 0.51
ALF1P53904 Q0297Q0297 156 nt18.08■□□□□ 0.48
ALF1P53904 DBP2YNL112W 1641 nt17.36■□□□□ 0.37
ALF1P53904 YCR051WYCR051W 669 nt17.32■□□□□ 0.36
ALF1P53904 YBR190WYBR190W 312 nt17.01■□□□□ 0.31
ALF1P53904 SCS3YGL126W 1143 nt16.93■□□□□ 0.3
ALF1P53904 TRN1tP(UGG)A 72 nt16.72■□□□□ 0.27
ALF1P53904 SUF9tP(UGG)F 72 nt16.72■□□□□ 0.27
ALF1P53904 SUF8tP(UGG)H 72 nt16.72■□□□□ 0.27
ALF1P53904 tP(UGG)LtP(UGG)L 72 nt16.72■□□□□ 0.27
ALF1P53904 SUF7tP(UGG)M 72 nt16.72■□□□□ 0.27
ALF1P53904 tP(UGG)N1tP(UGG)N1 72 nt16.72■□□□□ 0.27
ALF1P53904 tP(UGG)N2tP(UGG)N2 72 nt16.72■□□□□ 0.27
ALF1P53904 tP(UGG)O1tP(UGG)O1 72 nt16.72■□□□□ 0.27
ALF1P53904 SUF11tP(UGG)O2 72 nt16.72■□□□□ 0.27
ALF1P53904 RTC3YHR087W 336 nt16.69■□□□□ 0.26
ALF1P53904 CCC1YLR220W 969 nt16.65■□□□□ 0.26
ALF1P53904 YOL085CYOL085C 342 nt16.34■□□□□ 0.21
ALF1P53904 RPP1BYDL130W 321 nt16.25■□□□□ 0.19
ALF1P53904 RVS167YDR388W 1449 nt16.25■□□□□ 0.19
ALF1P53904 PKP1YIL042C 1185 nt16.21■□□□□ 0.19
ALF1P53904 SCJ1YMR214W 1134 nt16.07■□□□□ 0.16
ALF1P53904 PUT4YOR348C 1884 nt15.78■□□□□ 0.12
ALF1P53904 SSA3YBL075C 1950 nt15.75■□□□□ 0.11
ALF1P53904 tP(UGG)O3tP(UGG)O3 72 nt15.7■□□□□ 0.1
ALF1P53904 PET122YER153C 765 nt15.6■□□□□ 0.09
ALF1P53904 SHR5YOL110W 714 nt15.56■□□□□ 0.08
ALF1P53904 URN1YPR152C 1398 nt15.44■□□□□ 0.06
ALF1P53904 ARE1YCR048W 1833 nt15.37■□□□□ 0.05
ALF1P53904 DEP1YAL013W 1218 nt15.35■□□□□ 0.05
ALF1P53904 SCR1SCR1 522 nt15.32■□□□□ 0.04
ALF1P53904 SAH1YER043C 1350 nt15.32■□□□□ 0.04
ALF1P53904 POA1YBR022W 534 nt15.31■□□□□ 0.04
ALF1P53904 OPI9YLR338W 858 nt15.26■□□□□ 0.03
ALF1P53904 YHR049C-AYHR049C-A 297 nt15.2■□□□□ 0.02
ALF1P53904 YDJ1YNL064C 1230 nt15.14■□□□□ 0.01
ALF1P53904 RRN5YLR141W 1092 nt15.13■□□□□ 0.01
ALF1P53904 RPN10YHR200W 807 nt15.08■□□□□ 0
ALF1P53904 BSC6YOL137W 1494 nt15.03■□□□□ -0
ALF1P53904 ATS1YAL020C 1002 nt15.02■□□□□ -0
ALF1P53904 YNL208WYNL208W 600 nt15□□□□□ -0.01
ALF1P53904 GAR1YHR089C 618 nt14.97□□□□□ -0.01
ALF1P53904 BUD23YCR047C 828 nt14.87□□□□□ -0.03
ALF1P53904 PUN1YLR414C 792 nt14.82□□□□□ -0.04
ALF1P53904 YER088W-BYER088W-B 147 nt14.8□□□□□ -0.04
ALF1P53904 PTC2YER089C 1395 nt14.75□□□□□ -0.05
ALF1P53904 YJR018WYJR018W 363 nt14.7□□□□□ -0.06
ALF1P53904 RSB1YOR049C 1065 nt14.7□□□□□ -0.06
ALF1P53904 NAB2YGL122C 1578 nt14.59□□□□□ -0.07
ALF1P53904 SPT5YML010W 3192 nt14.55□□□□□ -0.08
ALF1P53904 TIR1YER011W 765 nt14.45□□□□□ -0.1
ALF1P53904 SSA1YAL005C 1929 nt14.37□□□□□ -0.11
ALF1P53904 FPR4YLR449W 1179 nt14.36□□□□□ -0.11
ALF1P53904 YJR120WYJR120W 351 nt14.33□□□□□ -0.12
ALF1P53904 DAL1YIR027C 1383 nt14.32□□□□□ -0.12
ALF1P53904 FIS1YIL065C 468 nt14.31□□□□□ -0.12
ALF1P53904 SSA4YER103W 1929 nt14.29□□□□□ -0.12
ALF1P53904 RPP2BYDR382W 333 nt14.28□□□□□ -0.12
ALF1P53904 INM2YDR287W 879 nt14.2□□□□□ -0.14
ALF1P53904 PHO4YFR034C 939 nt14.19□□□□□ -0.14
ALF1P53904 MEP2YNL142W 1500 nt14.13□□□□□ -0.15
ALF1P53904 YPS1YLR120C 1710 nt14.05□□□□□ -0.16
ALF1P53904 SRB2YHR041C 633 nt14.05□□□□□ -0.16
ALF1P53904 YBL100CYBL100C 315 nt14.02□□□□□ -0.17
ALF1P53904 YHR165W-AYHR165W-A 312 nt13.97□□□□□ -0.17
ALF1P53904 PST2YDR032C 597 nt13.96□□□□□ -0.17
ALF1P53904 DCW1YKL046C 1350 nt13.94□□□□□ -0.18
ALF1P53904 BDH2YAL061W 1254 nt13.9□□□□□ -0.18
ALF1P53904 YDR095CYDR095C 411 nt13.87□□□□□ -0.19
ALF1P53904 FUN26YAL022C 1554 nt13.83□□□□□ -0.19
ALF1P53904 WWM1YFL010C 636 nt13.76□□□□□ -0.21
ALF1P53904 ALF1YNL148C 765 nt13.75□□□□□ -0.21
ALF1P53904 BDF1YLR399C 2061 nt13.75□□□□□ -0.21
ALF1P53904 TRM9YML014W 840 nt13.74□□□□□ -0.21
ALF1P53904 EMI2YDR516C 1503 nt13.73□□□□□ -0.21
ALF1P53904 YMR090WYMR090W 684 nt13.67□□□□□ -0.22
ALF1P53904 RPP2AYOL039W 321 nt13.64□□□□□ -0.23
ALF1P53904 CAC2YML102W 1407 nt13.62□□□□□ -0.23
ALF1P53904 LSM3YLR438C-A 270 nt13.61□□□□□ -0.23
ALF1P53904 PTP1YDL230W 1008 nt13.6□□□□□ -0.23
ALF1P53904 YBR220CYBR220C 1683 nt13.59□□□□□ -0.23
ALF1P53904 YDL221WYDL221W 552 nt13.58□□□□□ -0.24
ALF1P53904 CCT6YDR188W 1641 nt13.57□□□□□ -0.24
ALF1P53904 TAT1YBR069C 1860 nt13.55□□□□□ -0.24
ALF1P53904 SHU1YHL006C 453 nt13.53□□□□□ -0.24
ALF1P53904 YAL037C-BYAL037C-B 975 nt13.52□□□□□ -0.25
ALF1P53904 SUF2tP(AGG)C 72 nt13.51□□□□□ -0.25
ALF1P53904 SUF10tP(AGG)N 72 nt13.51□□□□□ -0.25
ALF1P53904 YFL021C-AYFL021C-A 855 nt13.5□□□□□ -0.25
ALF1P53904 YGR021WYGR021W 873 nt13.5□□□□□ -0.25
ALF1P53904 SDH1YKL148C 1923 nt13.49□□□□□ -0.25
ALF1P53904 SIS1YNL007C 1059 nt13.49□□□□□ -0.25
ALF1P53904 HOM6YJR139C 1080 nt13.43□□□□□ -0.26
ALF1P53904 IRC15YPL017C 1500 nt13.39□□□□□ -0.27
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms