Protein–RNA interactions for Protein: P09959

SWI6, Regulatory protein SWI6, yeastyeast

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWI6P09959 YML009W-BYML009W-B 477 nt22.22■■□□□ 1.15
SWI6P09959 NSR1YGR159C 1245 nt22.14■■□□□ 1.13
SWI6P09959 NOP1YDL014W 984 nt21.85■■□□□ 1.09
SWI6P09959 YKL036CYKL036C 393 nt20.61■□□□□ 0.89
SWI6P09959 MDJ1YFL016C 1536 nt19.61■□□□□ 0.73
SWI6P09959 YJL027CYJL027C 417 nt19.33■□□□□ 0.68
SWI6P09959 Q0297Q0297 156 nt19.26■□□□□ 0.67
SWI6P09959 SRX1YKL086W 384 nt19.06■□□□□ 0.64
SWI6P09959 SCS3YGL126W 1143 nt18.96■□□□□ 0.63
SWI6P09959 YCR051WYCR051W 669 nt18.13■□□□□ 0.49
SWI6P09959 YOL085CYOL085C 342 nt17.81■□□□□ 0.44
SWI6P09959 SCJ1YMR214W 1134 nt17.49■□□□□ 0.39
SWI6P09959 PKP1YIL042C 1185 nt17.46■□□□□ 0.39
SWI6P09959 DBP2YNL112W 1641 nt17.33■□□□□ 0.37
SWI6P09959 RPP1BYDL130W 321 nt17.28■□□□□ 0.36
SWI6P09959 ATS1YAL020C 1002 nt17.12■□□□□ 0.33
SWI6P09959 TRN1tP(UGG)A 72 nt17.05■□□□□ 0.32
SWI6P09959 SUF9tP(UGG)F 72 nt17.05■□□□□ 0.32
SWI6P09959 SUF8tP(UGG)H 72 nt17.05■□□□□ 0.32
SWI6P09959 tP(UGG)LtP(UGG)L 72 nt17.05■□□□□ 0.32
SWI6P09959 SUF7tP(UGG)M 72 nt17.05■□□□□ 0.32
SWI6P09959 tP(UGG)N1tP(UGG)N1 72 nt17.05■□□□□ 0.32
SWI6P09959 tP(UGG)N2tP(UGG)N2 72 nt17.05■□□□□ 0.32
SWI6P09959 tP(UGG)O1tP(UGG)O1 72 nt17.05■□□□□ 0.32
SWI6P09959 SUF11tP(UGG)O2 72 nt17.05■□□□□ 0.32
SWI6P09959 CCC1YLR220W 969 nt16.84■□□□□ 0.29
SWI6P09959 YBR190WYBR190W 312 nt16.82■□□□□ 0.28
SWI6P09959 SCR1SCR1 522 nt16.45■□□□□ 0.22
SWI6P09959 PET122YER153C 765 nt16.42■□□□□ 0.22
SWI6P09959 RTC3YHR087W 336 nt16.41■□□□□ 0.22
SWI6P09959 RVS167YDR388W 1449 nt16.38■□□□□ 0.21
SWI6P09959 tP(UGG)O3tP(UGG)O3 72 nt16.18■□□□□ 0.18
SWI6P09959 RRN5YLR141W 1092 nt16.02■□□□□ 0.16
SWI6P09959 RSB1YOR049C 1065 nt15.86■□□□□ 0.13
SWI6P09959 SHR5YOL110W 714 nt15.77■□□□□ 0.12
SWI6P09959 PST2YDR032C 597 nt15.76■□□□□ 0.11
SWI6P09959 YER088W-BYER088W-B 147 nt15.69■□□□□ 0.1
SWI6P09959 YDJ1YNL064C 1230 nt15.67■□□□□ 0.1
SWI6P09959 SSA3YBL075C 1950 nt15.47■□□□□ 0.07
SWI6P09959 YKL097CYKL097C 411 nt15.44■□□□□ 0.06
SWI6P09959 URN1YPR152C 1398 nt15.34■□□□□ 0.05
SWI6P09959 PUT4YOR348C 1884 nt15.27■□□□□ 0.03
SWI6P09959 DEP1YAL013W 1218 nt15.26■□□□□ 0.03
SWI6P09959 GAR1YHR089C 618 nt15.23■□□□□ 0.03
SWI6P09959 RPN10YHR200W 807 nt15.17■□□□□ 0.02
SWI6P09959 OPI9YLR338W 858 nt15.15■□□□□ 0.02
SWI6P09959 YNL208WYNL208W 600 nt15.11■□□□□ 0.01
SWI6P09959 SAH1YER043C 1350 nt15.02■□□□□ -0
SWI6P09959 SHU1YHL006C 453 nt14.99□□□□□ -0.01
SWI6P09959 ARE1YCR048W 1833 nt14.96□□□□□ -0.01
SWI6P09959 YHR049C-AYHR049C-A 297 nt14.77□□□□□ -0.05
SWI6P09959 POA1YBR022W 534 nt14.77□□□□□ -0.05
SWI6P09959 TIR1YER011W 765 nt14.74□□□□□ -0.05
SWI6P09959 PUN1YLR414C 792 nt14.74□□□□□ -0.05
SWI6P09959 YOR139CYOR139C 393 nt14.67□□□□□ -0.06
SWI6P09959 YJR018WYJR018W 363 nt14.64□□□□□ -0.07
SWI6P09959 YAL037C-BYAL037C-B 975 nt14.6□□□□□ -0.07
SWI6P09959 SSA1YAL005C 1929 nt14.54□□□□□ -0.08
SWI6P09959 PTC2YER089C 1395 nt14.51□□□□□ -0.09
SWI6P09959 NPL3YDR432W 1245 nt14.5□□□□□ -0.09
SWI6P09959 BSC6YOL137W 1494 nt14.47□□□□□ -0.09
SWI6P09959 BUD23YCR047C 828 nt14.43□□□□□ -0.1
SWI6P09959 RPP2BYDR382W 333 nt14.38□□□□□ -0.11
SWI6P09959 NAB2YGL122C 1578 nt14.37□□□□□ -0.11
SWI6P09959 YJR120WYJR120W 351 nt14.34□□□□□ -0.11
SWI6P09959 YGR021WYGR021W 873 nt14.23□□□□□ -0.13
SWI6P09959 SRB2YHR041C 633 nt14.21□□□□□ -0.13
SWI6P09959 INM2YDR287W 879 nt14.18□□□□□ -0.14
SWI6P09959 HOM6YJR139C 1080 nt14.17□□□□□ -0.14
SWI6P09959 YOL037CYOL037C 354 nt14.17□□□□□ -0.14
SWI6P09959 DAL1YIR027C 1383 nt14.17□□□□□ -0.14
SWI6P09959 MNP1YGL068W 585 nt14.14□□□□□ -0.15
SWI6P09959 WWM1YFL010C 636 nt14.11□□□□□ -0.15
SWI6P09959 FIS1YIL065C 468 nt14.11□□□□□ -0.15
SWI6P09959 FPR4YLR449W 1179 nt14.09□□□□□ -0.15
SWI6P09959 tM(CAU)CtM(CAU)C 72 nt14.08□□□□□ -0.16
SWI6P09959 IMT4tM(CAU)E 72 nt14.08□□□□□ -0.16
SWI6P09959 IMT3tM(CAU)J3 72 nt14.08□□□□□ -0.16
SWI6P09959 IMT1tM(CAU)O1 72 nt14.08□□□□□ -0.16
SWI6P09959 IMT2tM(CAU)P 72 nt14.08□□□□□ -0.16
SWI6P09959 BDH2YAL061W 1254 nt14.05□□□□□ -0.16
SWI6P09959 PHO4YFR034C 939 nt14□□□□□ -0.17
SWI6P09959 YBL100CYBL100C 315 nt13.98□□□□□ -0.17
SWI6P09959 RKM5YLR137W 1104 nt13.96□□□□□ -0.17
SWI6P09959 YFL021C-AYFL021C-A 855 nt13.91□□□□□ -0.18
SWI6P09959 LSM3YLR438C-A 270 nt13.9□□□□□ -0.18
SWI6P09959 PUS2YGL063W 1113 nt13.82□□□□□ -0.2
SWI6P09959 TRM9YML014W 840 nt13.82□□□□□ -0.2
SWI6P09959 FUN26YAL022C 1554 nt13.81□□□□□ -0.2
SWI6P09959 SPT5YML010W 3192 nt13.79□□□□□ -0.2
SWI6P09959 YLR281CYLR281C 468 nt13.77□□□□□ -0.21
SWI6P09959 YPS1YLR120C 1710 nt13.76□□□□□ -0.21
SWI6P09959 MOT3YMR070W 1473 nt13.74□□□□□ -0.21
SWI6P09959 YDR095CYDR095C 411 nt13.68□□□□□ -0.22
SWI6P09959 WHI5YOR083W 888 nt13.67□□□□□ -0.22
SWI6P09959 CCT6YDR188W 1641 nt13.66□□□□□ -0.22
SWI6P09959 ALF1YNL148C 765 nt13.66□□□□□ -0.22
SWI6P09959 YHR165W-AYHR165W-A 312 nt13.61□□□□□ -0.23
SWI6P09959 MEP2YNL142W 1500 nt13.6□□□□□ -0.23
SWI6P09959 SUF2tP(AGG)C 72 nt13.59□□□□□ -0.23
Retrieved 100 of 7,029 protein–RNA pairs in 82.1 ms