Protein–RNA interactions for Protein: P53882

TDA7, Topoisomerase I damage affected protein 7, yeastyeast

Predicted RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA7P53882 YML009W-BYML009W-B 477 nt20.65■□□□□ 0.9
TDA7P53882 NOP1YDL014W 984 nt20.17■□□□□ 0.82
TDA7P53882 NSR1YGR159C 1245 nt20.15■□□□□ 0.82
TDA7P53882 YKL036CYKL036C 393 nt18.95■□□□□ 0.62
TDA7P53882 YJL027CYJL027C 417 nt17.79■□□□□ 0.44
TDA7P53882 Q0297Q0297 156 nt17.73■□□□□ 0.43
TDA7P53882 MDJ1YFL016C 1536 nt17.62■□□□□ 0.41
TDA7P53882 SRX1YKL086W 384 nt17.61■□□□□ 0.41
TDA7P53882 SCS3YGL126W 1143 nt17.41■□□□□ 0.38
TDA7P53882 YCR051WYCR051W 669 nt16.81■□□□□ 0.28
TDA7P53882 YOL085CYOL085C 342 nt16.39■□□□□ 0.21
TDA7P53882 PKP1YIL042C 1185 nt16.17■□□□□ 0.18
TDA7P53882 RPP1BYDL130W 321 nt15.94■□□□□ 0.14
TDA7P53882 SCJ1YMR214W 1134 nt15.81■□□□□ 0.12
TDA7P53882 TRN1tP(UGG)A 72 nt15.71■□□□□ 0.11
TDA7P53882 SUF9tP(UGG)F 72 nt15.71■□□□□ 0.11
TDA7P53882 SUF8tP(UGG)H 72 nt15.71■□□□□ 0.11
TDA7P53882 tP(UGG)LtP(UGG)L 72 nt15.71■□□□□ 0.11
TDA7P53882 SUF7tP(UGG)M 72 nt15.71■□□□□ 0.11
TDA7P53882 tP(UGG)N1tP(UGG)N1 72 nt15.71■□□□□ 0.11
TDA7P53882 tP(UGG)N2tP(UGG)N2 72 nt15.71■□□□□ 0.11
TDA7P53882 tP(UGG)O1tP(UGG)O1 72 nt15.71■□□□□ 0.11
TDA7P53882 SUF11tP(UGG)O2 72 nt15.71■□□□□ 0.11
TDA7P53882 ATS1YAL020C 1002 nt15.67■□□□□ 0.1
TDA7P53882 DBP2YNL112W 1641 nt15.67■□□□□ 0.1
TDA7P53882 CCC1YLR220W 969 nt15.66■□□□□ 0.1
TDA7P53882 PET122YER153C 765 nt15.21■□□□□ 0.03
TDA7P53882 SCR1SCR1 522 nt15.16■□□□□ 0.02
TDA7P53882 tP(UGG)O3tP(UGG)O3 72 nt15□□□□□ -0.01
TDA7P53882 YBR190WYBR190W 312 nt14.88□□□□□ -0.03
TDA7P53882 RVS167YDR388W 1449 nt14.87□□□□□ -0.03
TDA7P53882 RRN5YLR141W 1092 nt14.82□□□□□ -0.04
TDA7P53882 RTC3YHR087W 336 nt14.66□□□□□ -0.06
TDA7P53882 RSB1YOR049C 1065 nt14.65□□□□□ -0.06
TDA7P53882 YER088W-BYER088W-B 147 nt14.51□□□□□ -0.09
TDA7P53882 YDJ1YNL064C 1230 nt14.47□□□□□ -0.09
TDA7P53882 PST2YDR032C 597 nt14.43□□□□□ -0.1
TDA7P53882 SHR5YOL110W 714 nt14.4□□□□□ -0.1
TDA7P53882 GAR1YHR089C 618 nt14.18□□□□□ -0.14
TDA7P53882 YKL097CYKL097C 411 nt14.09□□□□□ -0.15
TDA7P53882 DEP1YAL013W 1218 nt13.95□□□□□ -0.18
TDA7P53882 URN1YPR152C 1398 nt13.82□□□□□ -0.2
TDA7P53882 SHU1YHL006C 453 nt13.79□□□□□ -0.2
TDA7P53882 YNL208WYNL208W 600 nt13.71□□□□□ -0.21
TDA7P53882 RPN10YHR200W 807 nt13.68□□□□□ -0.22
TDA7P53882 TIR1YER011W 765 nt13.65□□□□□ -0.22
TDA7P53882 YAL037C-BYAL037C-B 975 nt13.53□□□□□ -0.24
TDA7P53882 OPI9YLR338W 858 nt13.5□□□□□ -0.25
TDA7P53882 YOR139CYOR139C 393 nt13.43□□□□□ -0.26
TDA7P53882 SSA1YAL005C 1929 nt13.41□□□□□ -0.26
TDA7P53882 SAH1YER043C 1350 nt13.37□□□□□ -0.27
TDA7P53882 NPL3YDR432W 1245 nt13.29□□□□□ -0.28
TDA7P53882 SRB2YHR041C 633 nt13.24□□□□□ -0.29
TDA7P53882 PUT4YOR348C 1884 nt13.23□□□□□ -0.29
TDA7P53882 YJR018WYJR018W 363 nt13.19□□□□□ -0.3
TDA7P53882 WWM1YFL010C 636 nt13.13□□□□□ -0.31
TDA7P53882 PUN1YLR414C 792 nt13.13□□□□□ -0.31
TDA7P53882 MNP1YGL068W 585 nt13.12□□□□□ -0.31
TDA7P53882 YGR021WYGR021W 873 nt13.12□□□□□ -0.31
TDA7P53882 ARE1YCR048W 1833 nt13.11□□□□□ -0.31
TDA7P53882 HOM6YJR139C 1080 nt13.09□□□□□ -0.31
TDA7P53882 RPP2BYDR382W 333 nt13.04□□□□□ -0.32
TDA7P53882 YJR120WYJR120W 351 nt13.01□□□□□ -0.33
TDA7P53882 YOL037CYOL037C 354 nt13□□□□□ -0.33
TDA7P53882 YHR049C-AYHR049C-A 297 nt12.98□□□□□ -0.33
TDA7P53882 PTC2YER089C 1395 nt12.94□□□□□ -0.34
TDA7P53882 RKM5YLR137W 1104 nt12.91□□□□□ -0.34
TDA7P53882 POA1YBR022W 534 nt12.91□□□□□ -0.34
TDA7P53882 tM(CAU)CtM(CAU)C 72 nt12.88□□□□□ -0.35
TDA7P53882 IMT4tM(CAU)E 72 nt12.88□□□□□ -0.35
TDA7P53882 IMT3tM(CAU)J3 72 nt12.88□□□□□ -0.35
TDA7P53882 IMT1tM(CAU)O1 72 nt12.88□□□□□ -0.35
TDA7P53882 IMT2tM(CAU)P 72 nt12.88□□□□□ -0.35
TDA7P53882 YFL021C-AYFL021C-A 855 nt12.87□□□□□ -0.35
TDA7P53882 BDH2YAL061W 1254 nt12.8□□□□□ -0.36
TDA7P53882 BUD23YCR047C 828 nt12.76□□□□□ -0.37
TDA7P53882 SSA3YBL075C 1950 nt12.71□□□□□ -0.37
TDA7P53882 PUS2YGL063W 1113 nt12.71□□□□□ -0.37
TDA7P53882 LSM3YLR438C-A 270 nt12.69□□□□□ -0.38
TDA7P53882 NAB2YGL122C 1578 nt12.69□□□□□ -0.38
TDA7P53882 YLR281CYLR281C 468 nt12.67□□□□□ -0.38
TDA7P53882 INM2YDR287W 879 nt12.66□□□□□ -0.38
TDA7P53882 FPR4YLR449W 1179 nt12.66□□□□□ -0.38
TDA7P53882 YBL100CYBL100C 315 nt12.62□□□□□ -0.39
TDA7P53882 WHI5YOR083W 888 nt12.61□□□□□ -0.39
TDA7P53882 DAL1YIR027C 1383 nt12.59□□□□□ -0.39
TDA7P53882 TRM9YML014W 840 nt12.54□□□□□ -0.4
TDA7P53882 BSC6YOL137W 1494 nt12.53□□□□□ -0.4
TDA7P53882 MOT3YMR070W 1473 nt12.53□□□□□ -0.4
TDA7P53882 FIS1YIL065C 468 nt12.52□□□□□ -0.41
TDA7P53882 PHO4YFR034C 939 nt12.48□□□□□ -0.41
TDA7P53882 FUN26YAL022C 1554 nt12.47□□□□□ -0.41
TDA7P53882 FMP45YDL222C 930 nt12.4□□□□□ -0.42
TDA7P53882 DSK2YMR276W 1122 nt12.37□□□□□ -0.43
TDA7P53882 YPR011CYPR011C 981 nt12.36□□□□□ -0.43
TDA7P53882 YLR154C-GYLR154C-G 150 nt12.34□□□□□ -0.43
TDA7P53882 CCT6YDR188W 1641 nt12.33□□□□□ -0.43
TDA7P53882 YLR236CYLR236C 324 nt12.32□□□□□ -0.44
TDA7P53882 IMP2'YIL154C 1041 nt12.29□□□□□ -0.44
TDA7P53882 YCH1YGR203W 447 nt12.26□□□□□ -0.45
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms