Protein–RNA interactions for Protein: P37292

SHM1, Serine hydroxymethyltransferase, mitochondrial, yeastyeast

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHM1P37292 NSR1YGR159C 1245 nt22.1■■□□□ 1.13
SHM1P37292 YML009W-BYML009W-B 477 nt22.08■■□□□ 1.13
SHM1P37292 NOP1YDL014W 984 nt21.21■□□□□ 0.99
SHM1P37292 MDJ1YFL016C 1536 nt20.07■□□□□ 0.8
SHM1P37292 YKL036CYKL036C 393 nt19.38■□□□□ 0.69
SHM1P37292 SRX1YKL086W 384 nt18.61■□□□□ 0.57
SHM1P37292 Q0297Q0297 156 nt18.55■□□□□ 0.56
SHM1P37292 YJL027CYJL027C 417 nt18.36■□□□□ 0.53
SHM1P37292 YCR051WYCR051W 669 nt17.67■□□□□ 0.42
SHM1P37292 DBP2YNL112W 1641 nt17.66■□□□□ 0.42
SHM1P37292 SCS3YGL126W 1143 nt17.59■□□□□ 0.41
SHM1P37292 TRN1tP(UGG)A 72 nt17.04■□□□□ 0.32
SHM1P37292 SUF9tP(UGG)F 72 nt17.04■□□□□ 0.32
SHM1P37292 SUF8tP(UGG)H 72 nt17.04■□□□□ 0.32
SHM1P37292 tP(UGG)LtP(UGG)L 72 nt17.04■□□□□ 0.32
SHM1P37292 SUF7tP(UGG)M 72 nt17.04■□□□□ 0.32
SHM1P37292 tP(UGG)N1tP(UGG)N1 72 nt17.04■□□□□ 0.32
SHM1P37292 tP(UGG)N2tP(UGG)N2 72 nt17.04■□□□□ 0.32
SHM1P37292 tP(UGG)O1tP(UGG)O1 72 nt17.04■□□□□ 0.32
SHM1P37292 SUF11tP(UGG)O2 72 nt17.04■□□□□ 0.32
SHM1P37292 YBR190WYBR190W 312 nt17.04■□□□□ 0.32
SHM1P37292 CCC1YLR220W 969 nt16.91■□□□□ 0.3
SHM1P37292 YOL085CYOL085C 342 nt16.87■□□□□ 0.29
SHM1P37292 PKP1YIL042C 1185 nt16.73■□□□□ 0.27
SHM1P37292 RTC3YHR087W 336 nt16.68■□□□□ 0.26
SHM1P37292 RPP1BYDL130W 321 nt16.66■□□□□ 0.26
SHM1P37292 SCJ1YMR214W 1134 nt16.41■□□□□ 0.22
SHM1P37292 RVS167YDR388W 1449 nt16.32■□□□□ 0.2
SHM1P37292 PET122YER153C 765 nt16.03■□□□□ 0.16
SHM1P37292 tP(UGG)O3tP(UGG)O3 72 nt16.03■□□□□ 0.16
SHM1P37292 PUT4YOR348C 1884 nt15.8■□□□□ 0.12
SHM1P37292 SHR5YOL110W 714 nt15.75■□□□□ 0.11
SHM1P37292 ATS1YAL020C 1002 nt15.62■□□□□ 0.09
SHM1P37292 SCR1SCR1 522 nt15.62■□□□□ 0.09
SHM1P37292 URN1YPR152C 1398 nt15.54■□□□□ 0.08
SHM1P37292 DEP1YAL013W 1218 nt15.53■□□□□ 0.08
SHM1P37292 RRN5YLR141W 1092 nt15.52■□□□□ 0.08
SHM1P37292 ARE1YCR048W 1833 nt15.45■□□□□ 0.06
SHM1P37292 YDJ1YNL064C 1230 nt15.45■□□□□ 0.06
SHM1P37292 SSA3YBL075C 1950 nt15.44■□□□□ 0.06
SHM1P37292 SAH1YER043C 1350 nt15.4■□□□□ 0.06
SHM1P37292 OPI9YLR338W 858 nt15.35■□□□□ 0.05
SHM1P37292 POA1YBR022W 534 nt15.28■□□□□ 0.04
SHM1P37292 GAR1YHR089C 618 nt15.23■□□□□ 0.03
SHM1P37292 YER088W-BYER088W-B 147 nt15.22■□□□□ 0.03
SHM1P37292 YHR049C-AYHR049C-A 297 nt15.22■□□□□ 0.03
SHM1P37292 YNL208WYNL208W 600 nt15.11■□□□□ 0.01
SHM1P37292 RPN10YHR200W 807 nt15.09■□□□□ 0.01
SHM1P37292 RSB1YOR049C 1065 nt15.08■□□□□ 0
SHM1P37292 BSC6YOL137W 1494 nt15□□□□□ -0.01
SHM1P37292 BUD23YCR047C 828 nt14.83□□□□□ -0.04
SHM1P37292 PUN1YLR414C 792 nt14.83□□□□□ -0.04
SHM1P37292 PTC2YER089C 1395 nt14.8□□□□□ -0.04
SHM1P37292 YJR018WYJR018W 363 nt14.78□□□□□ -0.04
SHM1P37292 TIR1YER011W 765 nt14.7□□□□□ -0.06
SHM1P37292 SSA1YAL005C 1929 nt14.68□□□□□ -0.06
SHM1P37292 YJR120WYJR120W 351 nt14.65□□□□□ -0.06
SHM1P37292 SPT5YML010W 3192 nt14.6□□□□□ -0.07
SHM1P37292 NAB2YGL122C 1578 nt14.58□□□□□ -0.08
SHM1P37292 PST2YDR032C 597 nt14.54□□□□□ -0.08
SHM1P37292 SRB2YHR041C 633 nt14.52□□□□□ -0.09
SHM1P37292 FIS1YIL065C 468 nt14.45□□□□□ -0.1
SHM1P37292 DAL1YIR027C 1383 nt14.35□□□□□ -0.11
SHM1P37292 FPR4YLR449W 1179 nt14.35□□□□□ -0.11
SHM1P37292 RPP2BYDR382W 333 nt14.31□□□□□ -0.12
SHM1P37292 PHO4YFR034C 939 nt14.25□□□□□ -0.13
SHM1P37292 INM2YDR287W 879 nt14.21□□□□□ -0.13
SHM1P37292 SSA4YER103W 1929 nt14.13□□□□□ -0.15
SHM1P37292 YBL100CYBL100C 315 nt14.1□□□□□ -0.15
SHM1P37292 YPS1YLR120C 1710 nt14.09□□□□□ -0.15
SHM1P37292 WWM1YFL010C 636 nt14.08□□□□□ -0.16
SHM1P37292 MEP2YNL142W 1500 nt14.08□□□□□ -0.16
SHM1P37292 SHU1YHL006C 453 nt14.06□□□□□ -0.16
SHM1P37292 BDH2YAL061W 1254 nt14.05□□□□□ -0.16
SHM1P37292 YAL037C-BYAL037C-B 975 nt13.99□□□□□ -0.17
SHM1P37292 DCW1YKL046C 1350 nt13.96□□□□□ -0.18
SHM1P37292 FUN26YAL022C 1554 nt13.95□□□□□ -0.18
SHM1P37292 YDR095CYDR095C 411 nt13.94□□□□□ -0.18
SHM1P37292 YHR165W-AYHR165W-A 312 nt13.91□□□□□ -0.18
SHM1P37292 HOM6YJR139C 1080 nt13.8□□□□□ -0.2
SHM1P37292 TRM9YML014W 840 nt13.8□□□□□ -0.2
SHM1P37292 MNP1YGL068W 585 nt13.78□□□□□ -0.2
SHM1P37292 LSM3YLR438C-A 270 nt13.77□□□□□ -0.21
SHM1P37292 YKL097CYKL097C 411 nt13.75□□□□□ -0.21
SHM1P37292 PTP1YDL230W 1008 nt13.74□□□□□ -0.21
SHM1P37292 YFL021C-AYFL021C-A 855 nt13.74□□□□□ -0.21
SHM1P37292 YGR021WYGR021W 873 nt13.74□□□□□ -0.21
SHM1P37292 ALF1YNL148C 765 nt13.72□□□□□ -0.21
SHM1P37292 CAC2YML102W 1407 nt13.72□□□□□ -0.21
SHM1P37292 CCT6YDR188W 1641 nt13.72□□□□□ -0.21
SHM1P37292 EMI2YDR516C 1503 nt13.69□□□□□ -0.22
SHM1P37292 Q0182Q0182 405 nt13.66□□□□□ -0.22
SHM1P37292 RPP2AYOL039W 321 nt13.65□□□□□ -0.22
SHM1P37292 MOT3YMR070W 1473 nt13.65□□□□□ -0.22
SHM1P37292 BDF1YLR399C 2061 nt13.65□□□□□ -0.22
SHM1P37292 SIS1YNL007C 1059 nt13.6□□□□□ -0.23
SHM1P37292 RKM5YLR137W 1104 nt13.59□□□□□ -0.23
SHM1P37292 YDL221WYDL221W 552 nt13.55□□□□□ -0.24
SHM1P37292 YBR220CYBR220C 1683 nt13.54□□□□□ -0.24
SHM1P37292 SUF2tP(AGG)C 72 nt13.52□□□□□ -0.25
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms