Protein–RNA interactions for Protein: P32908

SMC1, Structural maintenance of chromosomes protein 1, yeastyeast

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMC1P32908 NSR1YGR159C 1245 nt21.96■■□□□ 1.11
SMC1P32908 YML009W-BYML009W-B 477 nt21.88■■□□□ 1.09
SMC1P32908 NOP1YDL014W 984 nt21.21■□□□□ 0.99
SMC1P32908 MDJ1YFL016C 1536 nt19.65■□□□□ 0.74
SMC1P32908 YKL036CYKL036C 393 nt19.41■□□□□ 0.7
SMC1P32908 SRX1YKL086W 384 nt18.56■□□□□ 0.56
SMC1P32908 Q0297Q0297 156 nt18.55■□□□□ 0.56
SMC1P32908 YJL027CYJL027C 417 nt18.11■□□□□ 0.49
SMC1P32908 SCS3YGL126W 1143 nt17.57■□□□□ 0.4
SMC1P32908 YCR051WYCR051W 669 nt17.56■□□□□ 0.4
SMC1P32908 DBP2YNL112W 1641 nt17.36■□□□□ 0.37
SMC1P32908 TRN1tP(UGG)A 72 nt16.89■□□□□ 0.29
SMC1P32908 SUF9tP(UGG)F 72 nt16.89■□□□□ 0.29
SMC1P32908 SUF8tP(UGG)H 72 nt16.89■□□□□ 0.29
SMC1P32908 tP(UGG)LtP(UGG)L 72 nt16.89■□□□□ 0.29
SMC1P32908 SUF7tP(UGG)M 72 nt16.89■□□□□ 0.29
SMC1P32908 tP(UGG)N1tP(UGG)N1 72 nt16.89■□□□□ 0.29
SMC1P32908 tP(UGG)N2tP(UGG)N2 72 nt16.89■□□□□ 0.29
SMC1P32908 tP(UGG)O1tP(UGG)O1 72 nt16.89■□□□□ 0.29
SMC1P32908 SUF11tP(UGG)O2 72 nt16.89■□□□□ 0.29
SMC1P32908 YOL085CYOL085C 342 nt16.84■□□□□ 0.29
SMC1P32908 YBR190WYBR190W 312 nt16.82■□□□□ 0.28
SMC1P32908 CCC1YLR220W 969 nt16.69■□□□□ 0.26
SMC1P32908 RPP1BYDL130W 321 nt16.62■□□□□ 0.25
SMC1P32908 PKP1YIL042C 1185 nt16.58■□□□□ 0.24
SMC1P32908 RTC3YHR087W 336 nt16.39■□□□□ 0.21
SMC1P32908 RVS167YDR388W 1449 nt16.19■□□□□ 0.18
SMC1P32908 SCJ1YMR214W 1134 nt16.12■□□□□ 0.17
SMC1P32908 tP(UGG)O3tP(UGG)O3 72 nt15.92■□□□□ 0.14
SMC1P32908 PET122YER153C 765 nt15.9■□□□□ 0.14
SMC1P32908 ATS1YAL020C 1002 nt15.67■□□□□ 0.1
SMC1P32908 SCR1SCR1 522 nt15.65■□□□□ 0.1
SMC1P32908 SHR5YOL110W 714 nt15.62■□□□□ 0.09
SMC1P32908 RRN5YLR141W 1092 nt15.44■□□□□ 0.06
SMC1P32908 PUT4YOR348C 1884 nt15.42■□□□□ 0.06
SMC1P32908 YDJ1YNL064C 1230 nt15.42■□□□□ 0.06
SMC1P32908 URN1YPR152C 1398 nt15.3■□□□□ 0.04
SMC1P32908 DEP1YAL013W 1218 nt15.23■□□□□ 0.03
SMC1P32908 YER088W-BYER088W-B 147 nt15.14■□□□□ 0.01
SMC1P32908 OPI9YLR338W 858 nt15.14■□□□□ 0.01
SMC1P32908 ARE1YCR048W 1833 nt15.08■□□□□ 0.01
SMC1P32908 SAH1YER043C 1350 nt15.08■□□□□ 0
SMC1P32908 GAR1YHR089C 618 nt15.07■□□□□ 0
SMC1P32908 SSA3YBL075C 1950 nt15.04■□□□□ -0
SMC1P32908 RSB1YOR049C 1065 nt15.02■□□□□ -0
SMC1P32908 RPN10YHR200W 807 nt15□□□□□ -0.01
SMC1P32908 YNL208WYNL208W 600 nt14.98□□□□□ -0.01
SMC1P32908 POA1YBR022W 534 nt14.91□□□□□ -0.02
SMC1P32908 YHR049C-AYHR049C-A 297 nt14.86□□□□□ -0.03
SMC1P32908 PUN1YLR414C 792 nt14.67□□□□□ -0.06
SMC1P32908 BSC6YOL137W 1494 nt14.62□□□□□ -0.07
SMC1P32908 Q0182Q0182 405 nt14.61□□□□□ -0.07
SMC1P32908 YJR018WYJR018W 363 nt14.6□□□□□ -0.07
SMC1P32908 TIR1YER011W 765 nt14.59□□□□□ -0.07
SMC1P32908 PST2YDR032C 597 nt14.58□□□□□ -0.08
SMC1P32908 PTC2YER089C 1395 nt14.53□□□□□ -0.08
SMC1P32908 BUD23YCR047C 828 nt14.49□□□□□ -0.09
SMC1P32908 SSA1YAL005C 1929 nt14.46□□□□□ -0.09
SMC1P32908 YJR120WYJR120W 351 nt14.37□□□□□ -0.11
SMC1P32908 NAB2YGL122C 1578 nt14.37□□□□□ -0.11
SMC1P32908 MOT3YMR070W 1473 nt14.28□□□□□ -0.12
SMC1P32908 RPP2BYDR382W 333 nt14.21□□□□□ -0.13
SMC1P32908 SRB2YHR041C 633 nt14.21□□□□□ -0.13
SMC1P32908 FIS1YIL065C 468 nt14.15□□□□□ -0.14
SMC1P32908 DAL1YIR027C 1383 nt14.14□□□□□ -0.15
SMC1P32908 SPT5YML010W 3192 nt14.13□□□□□ -0.15
SMC1P32908 INM2YDR287W 879 nt14.1□□□□□ -0.15
SMC1P32908 FPR4YLR449W 1179 nt14.07□□□□□ -0.16
SMC1P32908 PHO4YFR034C 939 nt14.01□□□□□ -0.17
SMC1P32908 SHU1YHL006C 453 nt14.01□□□□□ -0.17
SMC1P32908 BDH2YAL061W 1254 nt13.94□□□□□ -0.18
SMC1P32908 WWM1YFL010C 636 nt13.92□□□□□ -0.18
SMC1P32908 YBL100CYBL100C 315 nt13.92□□□□□ -0.18
SMC1P32908 YAL037C-BYAL037C-B 975 nt13.85□□□□□ -0.19
SMC1P32908 YKL097CYKL097C 411 nt13.84□□□□□ -0.19
SMC1P32908 YPS1YLR120C 1710 nt13.81□□□□□ -0.2
SMC1P32908 FUN26YAL022C 1554 nt13.76□□□□□ -0.21
SMC1P32908 MEP2YNL142W 1500 nt13.75□□□□□ -0.21
SMC1P32908 YGR021WYGR021W 873 nt13.75□□□□□ -0.21
SMC1P32908 LSM3YLR438C-A 270 nt13.74□□□□□ -0.21
SMC1P32908 HOM6YJR139C 1080 nt13.73□□□□□ -0.21
SMC1P32908 YDR095CYDR095C 411 nt13.71□□□□□ -0.21
SMC1P32908 TRM9YML014W 840 nt13.7□□□□□ -0.22
SMC1P32908 YFL021C-AYFL021C-A 855 nt13.69□□□□□ -0.22
SMC1P32908 SSA4YER103W 1929 nt13.64□□□□□ -0.23
SMC1P32908 YHR165W-AYHR165W-A 312 nt13.64□□□□□ -0.23
SMC1P32908 MNP1YGL068W 585 nt13.61□□□□□ -0.23
SMC1P32908 CCT6YDR188W 1641 nt13.57□□□□□ -0.24
SMC1P32908 ALF1YNL148C 765 nt13.56□□□□□ -0.24
SMC1P32908 DCW1YKL046C 1350 nt13.54□□□□□ -0.24
SMC1P32908 RKM5YLR137W 1104 nt13.51□□□□□ -0.25
SMC1P32908 PTP1YDL230W 1008 nt13.45□□□□□ -0.26
SMC1P32908 SUF2tP(AGG)C 72 nt13.44□□□□□ -0.26
SMC1P32908 SUF10tP(AGG)N 72 nt13.44□□□□□ -0.26
SMC1P32908 RPP2AYOL039W 321 nt13.44□□□□□ -0.26
SMC1P32908 SIS1YNL007C 1059 nt13.43□□□□□ -0.26
SMC1P32908 YOR139CYOR139C 393 nt13.37□□□□□ -0.27
SMC1P32908 EMI2YDR516C 1503 nt13.37□□□□□ -0.27
SMC1P32908 CAC2YML102W 1407 nt13.36□□□□□ -0.27
SMC1P32908 YOL037CYOL037C 354 nt13.31□□□□□ -0.28
Retrieved 100 of 7,029 protein–RNA pairs in 15 ms