Protein–RNA interactions for Protein: P53962

YNL035C, Uncharacterized WD repeat-containing protein YNL035C, yeastyeast

Known RBP Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL035CP53962 YML009W-BYML009W-B 477 nt20.32■□□□□ 0.84
YNL035CP53962 NOP1YDL014W 984 nt20.14■□□□□ 0.81
YNL035CP53962 NSR1YGR159C 1245 nt19.82■□□□□ 0.76
YNL035CP53962 YKL036CYKL036C 393 nt18.99■□□□□ 0.63
YNL035CP53962 MDJ1YFL016C 1536 nt18.36■□□□□ 0.53
YNL035CP53962 YJL027CYJL027C 417 nt17.82■□□□□ 0.44
YNL035CP53962 Q0297Q0297 156 nt17.71■□□□□ 0.43
YNL035CP53962 SRX1YKL086W 384 nt17.5■□□□□ 0.39
YNL035CP53962 SCS3YGL126W 1143 nt17.45■□□□□ 0.38
YNL035CP53962 YCR051WYCR051W 669 nt16.63■□□□□ 0.25
YNL035CP53962 YOL085CYOL085C 342 nt16.37■□□□□ 0.21
YNL035CP53962 SSA3YBL075C 1950 nt16.36■□□□□ 0.21
YNL035CP53962 SCJ1YMR214W 1134 nt16.32■□□□□ 0.2
YNL035CP53962 YGR139WYGR139W 339 nt16.12■□□□□ 0.17
YNL035CP53962 PKP1YIL042C 1185 nt15.97■□□□□ 0.15
YNL035CP53962 DBP2YNL112W 1641 nt15.93■□□□□ 0.14
YNL035CP53962 RPP1BYDL130W 321 nt15.89■□□□□ 0.13
YNL035CP53962 ATS1YAL020C 1002 nt15.81■□□□□ 0.12
YNL035CP53962 YBR190WYBR190W 312 nt15.72■□□□□ 0.11
YNL035CP53962 TRN1tP(UGG)A 72 nt15.44■□□□□ 0.06
YNL035CP53962 SUF9tP(UGG)F 72 nt15.44■□□□□ 0.06
YNL035CP53962 SUF8tP(UGG)H 72 nt15.44■□□□□ 0.06
YNL035CP53962 tP(UGG)LtP(UGG)L 72 nt15.44■□□□□ 0.06
YNL035CP53962 SUF7tP(UGG)M 72 nt15.44■□□□□ 0.06
YNL035CP53962 tP(UGG)N1tP(UGG)N1 72 nt15.44■□□□□ 0.06
YNL035CP53962 tP(UGG)N2tP(UGG)N2 72 nt15.44■□□□□ 0.06
YNL035CP53962 tP(UGG)O1tP(UGG)O1 72 nt15.44■□□□□ 0.06
YNL035CP53962 SUF11tP(UGG)O2 72 nt15.44■□□□□ 0.06
YNL035CP53962 RTC3YHR087W 336 nt15.34■□□□□ 0.05
YNL035CP53962 CCC1YLR220W 969 nt15.29■□□□□ 0.04
YNL035CP53962 VAR1Q0140 1197 nt15.27■□□□□ 0.04
YNL035CP53962 SCR1SCR1 522 nt15.2■□□□□ 0.02
YNL035CP53962 PUT4YOR348C 1884 nt15.11■□□□□ 0.01
YNL035CP53962 PET122YER153C 765 nt15.02■□□□□ -0
YNL035CP53962 tP(UGG)O3tP(UGG)O3 72 nt14.81□□□□□ -0.04
YNL035CP53962 RRN5YLR141W 1092 nt14.68□□□□□ -0.06
YNL035CP53962 RVS167YDR388W 1449 nt14.63□□□□□ -0.07
YNL035CP53962 ARE1YCR048W 1833 nt14.58□□□□□ -0.08
YNL035CP53962 RSB1YOR049C 1065 nt14.57□□□□□ -0.08
YNL035CP53962 SPT5YML010W 3192 nt14.55□□□□□ -0.08
YNL035CP53962 POA1YBR022W 534 nt14.54□□□□□ -0.08
YNL035CP53962 PST2YDR032C 597 nt14.53□□□□□ -0.08
YNL035CP53962 YDR509WYDR509W 348 nt14.45□□□□□ -0.1
YNL035CP53962 NME1NME1 340 nt14.41□□□□□ -0.1
YNL035CP53962 BSC6YOL137W 1494 nt14.4□□□□□ -0.1
YNL035CP53962 YER088W-BYER088W-B 147 nt14.39□□□□□ -0.11
YNL035CP53962 YDJ1YNL064C 1230 nt14.39□□□□□ -0.11
YNL035CP53962 SSA4YER103W 1929 nt14.38□□□□□ -0.11
YNL035CP53962 YHR049C-AYHR049C-A 297 nt14.35□□□□□ -0.11
YNL035CP53962 CSM2YIL132C 642 nt14.3□□□□□ -0.12
YNL035CP53962 YKL097CYKL097C 411 nt14.3□□□□□ -0.12
YNL035CP53962 SAH1YER043C 1350 nt14.25□□□□□ -0.13
YNL035CP53962 MOT3YMR070W 1473 nt14.21□□□□□ -0.13
YNL035CP53962 PAM17YKR065C 594 nt14.16□□□□□ -0.14
YNL035CP53962 SHR5YOL110W 714 nt14.16□□□□□ -0.14
YNL035CP53962 PAU21YOR394W 495 nt14.16□□□□□ -0.14
YNL035CP53962 PAU22YPL282C 495 nt14.16□□□□□ -0.14
YNL035CP53962 URN1YPR152C 1398 nt14.09□□□□□ -0.15
YNL035CP53962 Q0182Q0182 405 nt14.08□□□□□ -0.16
YNL035CP53962 ARO7YPR060C 771 nt14.03□□□□□ -0.16
YNL035CP53962 OPI9YLR338W 858 nt14.02□□□□□ -0.17
YNL035CP53962 BDF1YLR399C 2061 nt13.99□□□□□ -0.17
YNL035CP53962 Q0017Q0017 162 nt13.96□□□□□ -0.17
YNL035CP53962 Q0144Q0144 330 nt13.94□□□□□ -0.18
YNL035CP53962 DEP1YAL013W 1218 nt13.91□□□□□ -0.18
YNL035CP53962 BUD23YCR047C 828 nt13.9□□□□□ -0.18
YNL035CP53962 Q0142Q0142 177 nt13.9□□□□□ -0.18
YNL035CP53962 GAR1YHR089C 618 nt13.9□□□□□ -0.18
YNL035CP53962 BMT5YIL096C 1011 nt13.78□□□□□ -0.2
YNL035CP53962 REG2YBR050C 1017 nt13.78□□□□□ -0.2
YNL035CP53962 SHU1YHL006C 453 nt13.76□□□□□ -0.21
YNL035CP53962 BUR6YER159C 429 nt13.75□□□□□ -0.21
YNL035CP53962 TAT1YBR069C 1860 nt13.73□□□□□ -0.21
YNL035CP53962 SEM1YDR363W-A 270 nt13.67□□□□□ -0.22
YNL035CP53962 PTC2YER089C 1395 nt13.64□□□□□ -0.23
YNL035CP53962 MEP2YNL142W 1500 nt13.58□□□□□ -0.24
YNL035CP53962 PAC11YDR488C 1602 nt13.56□□□□□ -0.24
YNL035CP53962 PUN1YLR414C 792 nt13.53□□□□□ -0.24
YNL035CP53962 NAB2YGL122C 1578 nt13.51□□□□□ -0.25
YNL035CP53962 YOR139CYOR139C 393 nt13.49□□□□□ -0.25
YNL035CP53962 RPN10YHR200W 807 nt13.48□□□□□ -0.25
YNL035CP53962 DCW1YKL046C 1350 nt13.46□□□□□ -0.25
YNL035CP53962 YNL208WYNL208W 600 nt13.45□□□□□ -0.26
YNL035CP53962 Q0010Q0010 387 nt13.45□□□□□ -0.26
YNL035CP53962 TIR1YER011W 765 nt13.44□□□□□ -0.26
YNL035CP53962 NPL3YDR432W 1245 nt13.42□□□□□ -0.26
YNL035CP53962 FIS1YIL065C 468 nt13.38□□□□□ -0.27
YNL035CP53962 AI5_BETAQ0075 1065 nt13.35□□□□□ -0.27
YNL035CP53962 YIR018C-AYIR018C-A 138 nt13.35□□□□□ -0.27
YNL035CP53962 Q0255Q0255 1419 nt13.33□□□□□ -0.28
YNL035CP53962 YJR018WYJR018W 363 nt13.33□□□□□ -0.28
YNL035CP53962 YAL037C-BYAL037C-B 975 nt13.33□□□□□ -0.28
YNL035CP53962 SRN2YLR119W 642 nt13.3□□□□□ -0.28
YNL035CP53962 YBR220CYBR220C 1683 nt13.26□□□□□ -0.29
YNL035CP53962 NVJ2YPR091C 2313 nt13.24□□□□□ -0.29
YNL035CP53962 YOR169CYOR169C 465 nt13.21□□□□□ -0.29
YNL035CP53962 YGL188CYGL188C 174 nt13.2□□□□□ -0.3
YNL035CP53962 AI3Q0060 1248 nt13.19□□□□□ -0.3
YNL035CP53962 YPS1YLR120C 1710 nt13.19□□□□□ -0.3
YNL035CP53962 DAL1YIR027C 1383 nt13.18□□□□□ -0.3
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms