Protein–RNA interactions for Protein: P49573

CTR1, Copper transport protein CTR1, yeastyeast

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTR1P49573 YML009W-BYML009W-B 477 nt23.02■■□□□ 1.28
CTR1P49573 NSR1YGR159C 1245 nt22.56■■□□□ 1.2
CTR1P49573 NOP1YDL014W 984 nt22.33■■□□□ 1.17
CTR1P49573 YKL036CYKL036C 393 nt20.98■□□□□ 0.95
CTR1P49573 MDJ1YFL016C 1536 nt19.94■□□□□ 0.78
CTR1P49573 Q0297Q0297 156 nt19.78■□□□□ 0.76
CTR1P49573 YJL027CYJL027C 417 nt19.64■□□□□ 0.73
CTR1P49573 SRX1YKL086W 384 nt19.63■□□□□ 0.73
CTR1P49573 SCS3YGL126W 1143 nt19.35■□□□□ 0.69
CTR1P49573 YCR051WYCR051W 669 nt18.64■□□□□ 0.57
CTR1P49573 YOL085CYOL085C 342 nt18.25■□□□□ 0.51
CTR1P49573 PKP1YIL042C 1185 nt18■□□□□ 0.47
CTR1P49573 DBP2YNL112W 1641 nt17.83■□□□□ 0.44
CTR1P49573 RPP1BYDL130W 321 nt17.74■□□□□ 0.43
CTR1P49573 TRN1tP(UGG)A 72 nt17.65■□□□□ 0.42
CTR1P49573 SUF9tP(UGG)F 72 nt17.65■□□□□ 0.42
CTR1P49573 SUF8tP(UGG)H 72 nt17.65■□□□□ 0.42
CTR1P49573 tP(UGG)LtP(UGG)L 72 nt17.65■□□□□ 0.42
CTR1P49573 SUF7tP(UGG)M 72 nt17.65■□□□□ 0.42
CTR1P49573 tP(UGG)N1tP(UGG)N1 72 nt17.65■□□□□ 0.42
CTR1P49573 tP(UGG)N2tP(UGG)N2 72 nt17.65■□□□□ 0.42
CTR1P49573 tP(UGG)O1tP(UGG)O1 72 nt17.65■□□□□ 0.42
CTR1P49573 SUF11tP(UGG)O2 72 nt17.65■□□□□ 0.42
CTR1P49573 CCC1YLR220W 969 nt17.46■□□□□ 0.39
CTR1P49573 ATS1YAL020C 1002 nt17.35■□□□□ 0.37
CTR1P49573 SCJ1YMR214W 1134 nt17.32■□□□□ 0.36
CTR1P49573 PET122YER153C 765 nt17.01■□□□□ 0.31
CTR1P49573 YBR190WYBR190W 312 nt16.78■□□□□ 0.28
CTR1P49573 tP(UGG)O3tP(UGG)O3 72 nt16.77■□□□□ 0.28
CTR1P49573 SCR1SCR1 522 nt16.69■□□□□ 0.26
CTR1P49573 RRN5YLR141W 1092 nt16.52■□□□□ 0.24
CTR1P49573 RVS167YDR388W 1449 nt16.52■□□□□ 0.23
CTR1P49573 RTC3YHR087W 336 nt16.41■□□□□ 0.22
CTR1P49573 YER088W-BYER088W-B 147 nt16.21■□□□□ 0.19
CTR1P49573 RSB1YOR049C 1065 nt16.2■□□□□ 0.18
CTR1P49573 YDJ1YNL064C 1230 nt16.16■□□□□ 0.18
CTR1P49573 SHR5YOL110W 714 nt16.12■□□□□ 0.17
CTR1P49573 PST2YDR032C 597 nt16.06■□□□□ 0.16
CTR1P49573 GAR1YHR089C 618 nt15.82■□□□□ 0.12
CTR1P49573 DEP1YAL013W 1218 nt15.67■□□□□ 0.1
CTR1P49573 URN1YPR152C 1398 nt15.53■□□□□ 0.08
CTR1P49573 YKL097CYKL097C 411 nt15.48■□□□□ 0.07
CTR1P49573 SHU1YHL006C 453 nt15.38■□□□□ 0.05
CTR1P49573 YNL208WYNL208W 600 nt15.32■□□□□ 0.04
CTR1P49573 TIR1YER011W 765 nt15.27■□□□□ 0.04
CTR1P49573 OPI9YLR338W 858 nt15.24■□□□□ 0.03
CTR1P49573 RPN10YHR200W 807 nt15.19■□□□□ 0.02
CTR1P49573 PUT4YOR348C 1884 nt15.17■□□□□ 0.02
CTR1P49573 SAH1YER043C 1350 nt15.14■□□□□ 0.01
CTR1P49573 SSA1YAL005C 1929 nt15.13■□□□□ 0.01
CTR1P49573 SRB2YHR041C 633 nt15.11■□□□□ 0.01
CTR1P49573 YAL037C-BYAL037C-B 975 nt15.08■□□□□ 0
CTR1P49573 ARE1YCR048W 1833 nt15.01□□□□□ -0.01
CTR1P49573 YOR139CYOR139C 393 nt14.97□□□□□ -0.01
CTR1P49573 YJR120WYJR120W 351 nt14.87□□□□□ -0.03
CTR1P49573 YJR018WYJR018W 363 nt14.8□□□□□ -0.04
CTR1P49573 YHR049C-AYHR049C-A 297 nt14.74□□□□□ -0.05
CTR1P49573 PUN1YLR414C 792 nt14.72□□□□□ -0.05
CTR1P49573 WWM1YFL010C 636 nt14.71□□□□□ -0.05
CTR1P49573 MNP1YGL068W 585 nt14.7□□□□□ -0.06
CTR1P49573 POA1YBR022W 534 nt14.68□□□□□ -0.06
CTR1P49573 HOM6YJR139C 1080 nt14.65□□□□□ -0.06
CTR1P49573 SSA3YBL075C 1950 nt14.64□□□□□ -0.07
CTR1P49573 PTC2YER089C 1395 nt14.6□□□□□ -0.07
CTR1P49573 NPL3YDR432W 1245 nt14.58□□□□□ -0.08
CTR1P49573 YGR021WYGR021W 873 nt14.53□□□□□ -0.08
CTR1P49573 RPP2BYDR382W 333 nt14.45□□□□□ -0.1
CTR1P49573 RKM5YLR137W 1104 nt14.42□□□□□ -0.1
CTR1P49573 YOL037CYOL037C 354 nt14.38□□□□□ -0.11
CTR1P49573 BUD23YCR047C 828 nt14.37□□□□□ -0.11
CTR1P49573 YFL021C-AYFL021C-A 855 nt14.34□□□□□ -0.11
CTR1P49573 tM(CAU)CtM(CAU)C 72 nt14.33□□□□□ -0.12
CTR1P49573 IMT4tM(CAU)E 72 nt14.33□□□□□ -0.12
CTR1P49573 IMT3tM(CAU)J3 72 nt14.33□□□□□ -0.12
CTR1P49573 IMT1tM(CAU)O1 72 nt14.33□□□□□ -0.12
CTR1P49573 IMT2tM(CAU)P 72 nt14.33□□□□□ -0.12
CTR1P49573 BDH2YAL061W 1254 nt14.33□□□□□ -0.12
CTR1P49573 BSC6YOL137W 1494 nt14.31□□□□□ -0.12
CTR1P49573 NAB2YGL122C 1578 nt14.29□□□□□ -0.12
CTR1P49573 FIS1YIL065C 468 nt14.27□□□□□ -0.13
CTR1P49573 DAL1YIR027C 1383 nt14.19□□□□□ -0.14
CTR1P49573 INM2YDR287W 879 nt14.16□□□□□ -0.14
CTR1P49573 FPR4YLR449W 1179 nt14.15□□□□□ -0.14
CTR1P49573 YBL100CYBL100C 315 nt14.15□□□□□ -0.14
CTR1P49573 LSM3YLR438C-A 270 nt14.14□□□□□ -0.15
CTR1P49573 YLR281CYLR281C 468 nt14.12□□□□□ -0.15
CTR1P49573 PHO4YFR034C 939 nt14.1□□□□□ -0.15
CTR1P49573 PUS2YGL063W 1113 nt14.06□□□□□ -0.16
CTR1P49573 WHI5YOR083W 888 nt14.03□□□□□ -0.16
CTR1P49573 FUN26YAL022C 1554 nt14.03□□□□□ -0.16
CTR1P49573 YPR011CYPR011C 981 nt13.96□□□□□ -0.17
CTR1P49573 TRM9YML014W 840 nt13.95□□□□□ -0.18
CTR1P49573 CCT6YDR188W 1641 nt13.88□□□□□ -0.19
CTR1P49573 YLR236CYLR236C 324 nt13.87□□□□□ -0.19
CTR1P49573 MOT3YMR070W 1473 nt13.86□□□□□ -0.19
CTR1P49573 YLR154C-GYLR154C-G 150 nt13.78□□□□□ -0.2
CTR1P49573 DSK2YMR276W 1122 nt13.74□□□□□ -0.21
CTR1P49573 YPS1YLR120C 1710 nt13.73□□□□□ -0.21
CTR1P49573 FMP45YDL222C 930 nt13.73□□□□□ -0.21
CTR1P49573 YDR095CYDR095C 411 nt13.69□□□□□ -0.22
Retrieved 100 of 7,029 protein–RNA pairs in 9.6 ms