Protein–RNA interactions for Protein: P19516

COX11, Cytochrome c oxidase assembly protein COX11, mitochondrial, yeastyeast

Known RBP Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
COX11P19516 YML009W-BYML009W-B 477 nt21.94■■□□□ 1.1
COX11P19516 NSR1YGR159C 1245 nt21.72■■□□□ 1.07
COX11P19516 NOP1YDL014W 984 nt21.31■■□□□ 1
COX11P19516 YKL036CYKL036C 393 nt19.69■□□□□ 0.74
COX11P19516 MDJ1YFL016C 1536 nt19.3■□□□□ 0.68
COX11P19516 Q0297Q0297 156 nt18.63■□□□□ 0.57
COX11P19516 SRX1YKL086W 384 nt18.6■□□□□ 0.57
COX11P19516 YJL027CYJL027C 417 nt18.4■□□□□ 0.54
COX11P19516 SCS3YGL126W 1143 nt17.92■□□□□ 0.46
COX11P19516 YCR051WYCR051W 669 nt17.7■□□□□ 0.42
COX11P19516 YOL085CYOL085C 342 nt17.04■□□□□ 0.32
COX11P19516 DBP2YNL112W 1641 nt17.03■□□□□ 0.32
COX11P19516 PKP1YIL042C 1185 nt16.82■□□□□ 0.28
COX11P19516 TRN1tP(UGG)A 72 nt16.8■□□□□ 0.28
COX11P19516 SUF9tP(UGG)F 72 nt16.8■□□□□ 0.28
COX11P19516 SUF8tP(UGG)H 72 nt16.8■□□□□ 0.28
COX11P19516 tP(UGG)LtP(UGG)L 72 nt16.8■□□□□ 0.28
COX11P19516 SUF7tP(UGG)M 72 nt16.8■□□□□ 0.28
COX11P19516 tP(UGG)N1tP(UGG)N1 72 nt16.8■□□□□ 0.28
COX11P19516 tP(UGG)N2tP(UGG)N2 72 nt16.8■□□□□ 0.28
COX11P19516 tP(UGG)O1tP(UGG)O1 72 nt16.8■□□□□ 0.28
COX11P19516 SUF11tP(UGG)O2 72 nt16.8■□□□□ 0.28
COX11P19516 RPP1BYDL130W 321 nt16.74■□□□□ 0.27
COX11P19516 CCC1YLR220W 969 nt16.69■□□□□ 0.26
COX11P19516 YBR190WYBR190W 312 nt16.42■□□□□ 0.22
COX11P19516 RTC3YHR087W 336 nt16.12■□□□□ 0.17
COX11P19516 RVS167YDR388W 1449 nt16.09■□□□□ 0.17
COX11P19516 ATS1YAL020C 1002 nt16.03■□□□□ 0.16
COX11P19516 PET122YER153C 765 nt16■□□□□ 0.15
COX11P19516 SCJ1YMR214W 1134 nt15.98■□□□□ 0.15
COX11P19516 tP(UGG)O3tP(UGG)O3 72 nt15.91■□□□□ 0.14
COX11P19516 SCR1SCR1 522 nt15.85■□□□□ 0.13
COX11P19516 RRN5YLR141W 1092 nt15.54■□□□□ 0.08
COX11P19516 SHR5YOL110W 714 nt15.51■□□□□ 0.07
COX11P19516 YDJ1YNL064C 1230 nt15.38■□□□□ 0.05
COX11P19516 RSB1YOR049C 1065 nt15.26■□□□□ 0.03
COX11P19516 YER088W-BYER088W-B 147 nt15.23■□□□□ 0.03
COX11P19516 DEP1YAL013W 1218 nt15.1■□□□□ 0.01
COX11P19516 GAR1YHR089C 618 nt15.08■□□□□ 0
COX11P19516 URN1YPR152C 1398 nt15.07■□□□□ 0
COX11P19516 RPN10YHR200W 807 nt14.86□□□□□ -0.03
COX11P19516 PUT4YOR348C 1884 nt14.86□□□□□ -0.03
COX11P19516 YNL208WYNL208W 600 nt14.83□□□□□ -0.04
COX11P19516 PST2YDR032C 597 nt14.82□□□□□ -0.04
COX11P19516 OPI9YLR338W 858 nt14.82□□□□□ -0.04
COX11P19516 SAH1YER043C 1350 nt14.73□□□□□ -0.05
COX11P19516 ARE1YCR048W 1833 nt14.61□□□□□ -0.07
COX11P19516 TIR1YER011W 765 nt14.55□□□□□ -0.08
COX11P19516 YHR049C-AYHR049C-A 297 nt14.47□□□□□ -0.09
COX11P19516 POA1YBR022W 534 nt14.45□□□□□ -0.1
COX11P19516 PUN1YLR414C 792 nt14.41□□□□□ -0.1
COX11P19516 YJR018WYJR018W 363 nt14.38□□□□□ -0.11
COX11P19516 SSA1YAL005C 1929 nt14.35□□□□□ -0.11
COX11P19516 YKL097CYKL097C 411 nt14.29□□□□□ -0.12
COX11P19516 SHU1YHL006C 453 nt14.24□□□□□ -0.13
COX11P19516 PTC2YER089C 1395 nt14.23□□□□□ -0.13
COX11P19516 BUD23YCR047C 828 nt14.17□□□□□ -0.14
COX11P19516 YJR120WYJR120W 351 nt14.12□□□□□ -0.15
COX11P19516 BSC6YOL137W 1494 nt14.12□□□□□ -0.15
COX11P19516 RPP2BYDR382W 333 nt14.11□□□□□ -0.15
COX11P19516 SRB2YHR041C 633 nt14.11□□□□□ -0.15
COX11P19516 YAL037C-BYAL037C-B 975 nt14.04□□□□□ -0.16
COX11P19516 NAB2YGL122C 1578 nt14.02□□□□□ -0.16
COX11P19516 WWM1YFL010C 636 nt13.92□□□□□ -0.18
COX11P19516 FPR4YLR449W 1179 nt13.88□□□□□ -0.19
COX11P19516 DAL1YIR027C 1383 nt13.85□□□□□ -0.19
COX11P19516 YGR021WYGR021W 873 nt13.85□□□□□ -0.19
COX11P19516 INM2YDR287W 879 nt13.84□□□□□ -0.19
COX11P19516 FIS1YIL065C 468 nt13.83□□□□□ -0.2
COX11P19516 BDH2YAL061W 1254 nt13.8□□□□□ -0.2
COX11P19516 HOM6YJR139C 1080 nt13.78□□□□□ -0.2
COX11P19516 MNP1YGL068W 585 nt13.75□□□□□ -0.21
COX11P19516 YBL100CYBL100C 315 nt13.74□□□□□ -0.21
COX11P19516 PHO4YFR034C 939 nt13.73□□□□□ -0.21
COX11P19516 SSA3YBL075C 1950 nt13.69□□□□□ -0.22
COX11P19516 YFL021C-AYFL021C-A 855 nt13.68□□□□□ -0.22
COX11P19516 YOR139CYOR139C 393 nt13.68□□□□□ -0.22
COX11P19516 LSM3YLR438C-A 270 nt13.62□□□□□ -0.23
COX11P19516 NPL3YDR432W 1245 nt13.61□□□□□ -0.23
COX11P19516 Q0182Q0182 405 nt13.6□□□□□ -0.23
COX11P19516 RKM5YLR137W 1104 nt13.59□□□□□ -0.23
COX11P19516 FUN26YAL022C 1554 nt13.57□□□□□ -0.24
COX11P19516 TRM9YML014W 840 nt13.56□□□□□ -0.24
COX11P19516 YOL037CYOL037C 354 nt13.51□□□□□ -0.25
COX11P19516 YPS1YLR120C 1710 nt13.42□□□□□ -0.26
COX11P19516 ALF1YNL148C 765 nt13.4□□□□□ -0.26
COX11P19516 CCT6YDR188W 1641 nt13.39□□□□□ -0.27
COX11P19516 YDR095CYDR095C 411 nt13.35□□□□□ -0.27
COX11P19516 YHR165W-AYHR165W-A 312 nt13.33□□□□□ -0.28
COX11P19516 SUF2tP(AGG)C 72 nt13.3□□□□□ -0.28
COX11P19516 SUF10tP(AGG)N 72 nt13.3□□□□□ -0.28
COX11P19516 SPT5YML010W 3192 nt13.29□□□□□ -0.28
COX11P19516 MEP2YNL142W 1500 nt13.23□□□□□ -0.29
COX11P19516 YLR281CYLR281C 468 nt13.18□□□□□ -0.3
COX11P19516 WHI5YOR083W 888 nt13.16□□□□□ -0.3
COX11P19516 tM(CAU)CtM(CAU)C 72 nt13.15□□□□□ -0.3
COX11P19516 IMT4tM(CAU)E 72 nt13.15□□□□□ -0.3
COX11P19516 IMT3tM(CAU)J3 72 nt13.15□□□□□ -0.3
COX11P19516 IMT1tM(CAU)O1 72 nt13.15□□□□□ -0.3
COX11P19516 IMT2tM(CAU)P 72 nt13.15□□□□□ -0.3
Retrieved 100 of 7,029 protein–RNA pairs in 54.6 ms