Protein–RNA interactions for Protein: P53236

RSC1, Chromatin structure-remodeling complex subunit RSC1, yeastyeast

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSC1P53236 NSR1YGR159C 1245 nt22.68■■□□□ 1.22
RSC1P53236 YML009W-BYML009W-B 477 nt22.31■■□□□ 1.16
RSC1P53236 NOP1YDL014W 984 nt21.4■■□□□ 1.02
RSC1P53236 MDJ1YFL016C 1536 nt20.73■□□□□ 0.91
RSC1P53236 YKL036CYKL036C 393 nt19.31■□□□□ 0.68
RSC1P53236 YJL027CYJL027C 417 nt19.02■□□□□ 0.64
RSC1P53236 SRX1YKL086W 384 nt18.75■□□□□ 0.59
RSC1P53236 Q0297Q0297 156 nt18.61■□□□□ 0.57
RSC1P53236 DBP2YNL112W 1641 nt18.16■□□□□ 0.5
RSC1P53236 YBR190WYBR190W 312 nt17.79■□□□□ 0.44
RSC1P53236 YCR051WYCR051W 669 nt17.73■□□□□ 0.43
RSC1P53236 SCS3YGL126W 1143 nt17.59■□□□□ 0.41
RSC1P53236 RTC3YHR087W 336 nt17.33■□□□□ 0.36
RSC1P53236 TRN1tP(UGG)A 72 nt17.32■□□□□ 0.36
RSC1P53236 SUF9tP(UGG)F 72 nt17.32■□□□□ 0.36
RSC1P53236 SUF8tP(UGG)H 72 nt17.32■□□□□ 0.36
RSC1P53236 tP(UGG)LtP(UGG)L 72 nt17.32■□□□□ 0.36
RSC1P53236 SUF7tP(UGG)M 72 nt17.32■□□□□ 0.36
RSC1P53236 tP(UGG)N1tP(UGG)N1 72 nt17.32■□□□□ 0.36
RSC1P53236 tP(UGG)N2tP(UGG)N2 72 nt17.32■□□□□ 0.36
RSC1P53236 tP(UGG)O1tP(UGG)O1 72 nt17.32■□□□□ 0.36
RSC1P53236 SUF11tP(UGG)O2 72 nt17.32■□□□□ 0.36
RSC1P53236 CCC1YLR220W 969 nt17.13■□□□□ 0.33
RSC1P53236 SSA3YBL075C 1950 nt16.98■□□□□ 0.31
RSC1P53236 RVS167YDR388W 1449 nt16.77■□□□□ 0.27
RSC1P53236 YOL085CYOL085C 342 nt16.74■□□□□ 0.27
RSC1P53236 SCJ1YMR214W 1134 nt16.73■□□□□ 0.27
RSC1P53236 RPP1BYDL130W 321 nt16.69■□□□□ 0.26
RSC1P53236 PUT4YOR348C 1884 nt16.66■□□□□ 0.26
RSC1P53236 PKP1YIL042C 1185 nt16.57■□□□□ 0.24
RSC1P53236 tP(UGG)O3tP(UGG)O3 72 nt16.2■□□□□ 0.18
RSC1P53236 ARE1YCR048W 1833 nt16.19■□□□□ 0.18
RSC1P53236 SHR5YOL110W 714 nt16.13■□□□□ 0.17
RSC1P53236 POA1YBR022W 534 nt16.09■□□□□ 0.17
RSC1P53236 PET122YER153C 765 nt16.06■□□□□ 0.16
RSC1P53236 URN1YPR152C 1398 nt16.05■□□□□ 0.16
RSC1P53236 SAH1YER043C 1350 nt16.02■□□□□ 0.16
RSC1P53236 YHR049C-AYHR049C-A 297 nt15.94■□□□□ 0.14
RSC1P53236 OPI9YLR338W 858 nt15.94■□□□□ 0.14
RSC1P53236 DEP1YAL013W 1218 nt15.9■□□□□ 0.14
RSC1P53236 BSC6YOL137W 1494 nt15.84■□□□□ 0.13
RSC1P53236 ATS1YAL020C 1002 nt15.76■□□□□ 0.11
RSC1P53236 YDJ1YNL064C 1230 nt15.65■□□□□ 0.1
RSC1P53236 SPT5YML010W 3192 nt15.63■□□□□ 0.09
RSC1P53236 SCR1SCR1 522 nt15.62■□□□□ 0.09
RSC1P53236 RPN10YHR200W 807 nt15.59■□□□□ 0.09
RSC1P53236 RRN5YLR141W 1092 nt15.54■□□□□ 0.08
RSC1P53236 YNL208WYNL208W 600 nt15.54■□□□□ 0.08
RSC1P53236 BUD23YCR047C 828 nt15.5■□□□□ 0.07
RSC1P53236 PUN1YLR414C 792 nt15.43■□□□□ 0.06
RSC1P53236 GAR1YHR089C 618 nt15.41■□□□□ 0.06
RSC1P53236 PTC2YER089C 1395 nt15.38■□□□□ 0.05
RSC1P53236 SSA4YER103W 1929 nt15.28■□□□□ 0.04
RSC1P53236 YJR018WYJR018W 363 nt15.27■□□□□ 0.04
RSC1P53236 NAB2YGL122C 1578 nt15.24■□□□□ 0.03
RSC1P53236 YER088W-BYER088W-B 147 nt15.22■□□□□ 0.03
RSC1P53236 FIS1YIL065C 468 nt15.02■□□□□ -0
RSC1P53236 YJR120WYJR120W 351 nt15.02■□□□□ -0
RSC1P53236 RSB1YOR049C 1065 nt14.99□□□□□ -0.01
RSC1P53236 MEP2YNL142W 1500 nt14.93□□□□□ -0.02
RSC1P53236 DAL1YIR027C 1383 nt14.93□□□□□ -0.02
RSC1P53236 TIR1YER011W 765 nt14.92□□□□□ -0.02
RSC1P53236 SSA1YAL005C 1929 nt14.9□□□□□ -0.02
RSC1P53236 FPR4YLR449W 1179 nt14.87□□□□□ -0.03
RSC1P53236 PHO4YFR034C 939 nt14.81□□□□□ -0.04
RSC1P53236 BDF1YLR399C 2061 nt14.78□□□□□ -0.04
RSC1P53236 INM2YDR287W 879 nt14.77□□□□□ -0.05
RSC1P53236 YPS1YLR120C 1710 nt14.74□□□□□ -0.05
RSC1P53236 RPP2BYDR382W 333 nt14.73□□□□□ -0.05
RSC1P53236 DCW1YKL046C 1350 nt14.73□□□□□ -0.05
RSC1P53236 SRB2YHR041C 633 nt14.64□□□□□ -0.07
RSC1P53236 YHR165W-AYHR165W-A 312 nt14.57□□□□□ -0.08
RSC1P53236 TAT1YBR069C 1860 nt14.55□□□□□ -0.08
RSC1P53236 PST2YDR032C 597 nt14.55□□□□□ -0.08
RSC1P53236 YDR095CYDR095C 411 nt14.55□□□□□ -0.08
RSC1P53236 YBL100CYBL100C 315 nt14.55□□□□□ -0.08
RSC1P53236 EMI2YDR516C 1503 nt14.47□□□□□ -0.09
RSC1P53236 YBR220CYBR220C 1683 nt14.43□□□□□ -0.1
RSC1P53236 BDH2YAL061W 1254 nt14.4□□□□□ -0.1
RSC1P53236 FUN26YAL022C 1554 nt14.38□□□□□ -0.11
RSC1P53236 PTP1YDL230W 1008 nt14.36□□□□□ -0.11
RSC1P53236 CAC2YML102W 1407 nt14.35□□□□□ -0.11
RSC1P53236 YMR090WYMR090W 684 nt14.32□□□□□ -0.12
RSC1P53236 YDL221WYDL221W 552 nt14.31□□□□□ -0.12
RSC1P53236 RPP2AYOL039W 321 nt14.27□□□□□ -0.13
RSC1P53236 SDH1YKL148C 1923 nt14.25□□□□□ -0.13
RSC1P53236 ALF1YNL148C 765 nt14.23□□□□□ -0.13
RSC1P53236 WWM1YFL010C 636 nt14.2□□□□□ -0.14
RSC1P53236 TRM9YML014W 840 nt14.2□□□□□ -0.14
RSC1P53236 IRC15YPL017C 1500 nt14.13□□□□□ -0.15
RSC1P53236 CCT6YDR188W 1641 nt14.12□□□□□ -0.15
RSC1P53236 SIS1YNL007C 1059 nt14.11□□□□□ -0.15
RSC1P53236 LSM3YLR438C-A 270 nt14.1□□□□□ -0.15
RSC1P53236 YKL097CYKL097C 411 nt14.09□□□□□ -0.15
RSC1P53236 SCC4YER147C 1875 nt14.08□□□□□ -0.16
RSC1P53236 GIS3YLR094C 1509 nt14.03□□□□□ -0.16
RSC1P53236 PCH2YBR186W 1695 nt13.98□□□□□ -0.17
RSC1P53236 SUF2tP(AGG)C 72 nt13.97□□□□□ -0.17
RSC1P53236 SUF10tP(AGG)N 72 nt13.97□□□□□ -0.17
RSC1P53236 GFD2YCL036W 1701 nt13.96□□□□□ -0.17
Retrieved 100 of 7,029 protein–RNA pairs in 41.9 ms