Protein–RNA interactions for Protein: P40020

FIR1, Factor interacting with REF2, yeastyeast

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
FIR1P40020 YML009W-BYML009W-B 477 nt22.46■■□□□ 1.19
FIR1P40020 NOP1YDL014W 984 nt22.15■■□□□ 1.14
FIR1P40020 NSR1YGR159C 1245 nt21.64■■□□□ 1.05
FIR1P40020 YKL036CYKL036C 393 nt21.12■□□□□ 0.97
FIR1P40020 YJL027CYJL027C 417 nt19.87■□□□□ 0.77
FIR1P40020 Q0297Q0297 156 nt19.6■□□□□ 0.73
FIR1P40020 SCS3YGL126W 1143 nt19.59■□□□□ 0.73
FIR1P40020 SRX1YKL086W 384 nt19.33■□□□□ 0.68
FIR1P40020 MDJ1YFL016C 1536 nt18.5■□□□□ 0.55
FIR1P40020 YCR051WYCR051W 669 nt18.43■□□□□ 0.54
FIR1P40020 SCJ1YMR214W 1134 nt18.31■□□□□ 0.52
FIR1P40020 YOL085CYOL085C 342 nt18.25■□□□□ 0.51
FIR1P40020 PKP1YIL042C 1185 nt17.9■□□□□ 0.46
FIR1P40020 ATS1YAL020C 1002 nt17.73■□□□□ 0.43
FIR1P40020 RPP1BYDL130W 321 nt17.6■□□□□ 0.41
FIR1P40020 TRN1tP(UGG)A 72 nt17.02■□□□□ 0.32
FIR1P40020 SUF9tP(UGG)F 72 nt17.02■□□□□ 0.32
FIR1P40020 SUF8tP(UGG)H 72 nt17.02■□□□□ 0.32
FIR1P40020 tP(UGG)LtP(UGG)L 72 nt17.02■□□□□ 0.32
FIR1P40020 SUF7tP(UGG)M 72 nt17.02■□□□□ 0.32
FIR1P40020 tP(UGG)N1tP(UGG)N1 72 nt17.02■□□□□ 0.32
FIR1P40020 tP(UGG)N2tP(UGG)N2 72 nt17.02■□□□□ 0.32
FIR1P40020 tP(UGG)O1tP(UGG)O1 72 nt17.02■□□□□ 0.32
FIR1P40020 SUF11tP(UGG)O2 72 nt17.02■□□□□ 0.32
FIR1P40020 CCC1YLR220W 969 nt16.89■□□□□ 0.29
FIR1P40020 SCR1SCR1 522 nt16.79■□□□□ 0.28
FIR1P40020 PET122YER153C 765 nt16.72■□□□□ 0.27
FIR1P40020 RTC3YHR087W 336 nt16.64■□□□□ 0.25
FIR1P40020 DBP2YNL112W 1641 nt16.63■□□□□ 0.25
FIR1P40020 tP(UGG)O3tP(UGG)O3 72 nt16.36■□□□□ 0.21
FIR1P40020 RRN5YLR141W 1092 nt16.32■□□□□ 0.2
FIR1P40020 PST2YDR032C 597 nt16.28■□□□□ 0.2
FIR1P40020 RSB1YOR049C 1065 nt16.23■□□□□ 0.19
FIR1P40020 YKL097CYKL097C 411 nt16.07■□□□□ 0.16
FIR1P40020 YER088W-BYER088W-B 147 nt16■□□□□ 0.15
FIR1P40020 RVS167YDR388W 1449 nt15.9■□□□□ 0.14
FIR1P40020 YDJ1YNL064C 1230 nt15.82■□□□□ 0.12
FIR1P40020 YBR190WYBR190W 312 nt15.77■□□□□ 0.12
FIR1P40020 SHR5YOL110W 714 nt15.49■□□□□ 0.07
FIR1P40020 SHU1YHL006C 453 nt15.45■□□□□ 0.06
FIR1P40020 GAR1YHR089C 618 nt15.36■□□□□ 0.05
FIR1P40020 YOR139CYOR139C 393 nt15.25■□□□□ 0.03
FIR1P40020 NPL3YDR432W 1245 nt15.01□□□□□ -0.01
FIR1P40020 YAL037C-BYAL037C-B 975 nt14.99□□□□□ -0.01
FIR1P40020 TIR1YER011W 765 nt14.81□□□□□ -0.04
FIR1P40020 DEP1YAL013W 1218 nt14.81□□□□□ -0.04
FIR1P40020 YNL208WYNL208W 600 nt14.66□□□□□ -0.06
FIR1P40020 tM(CAU)CtM(CAU)C 72 nt14.6□□□□□ -0.07
FIR1P40020 IMT4tM(CAU)E 72 nt14.6□□□□□ -0.07
FIR1P40020 IMT3tM(CAU)J3 72 nt14.6□□□□□ -0.07
FIR1P40020 IMT1tM(CAU)O1 72 nt14.6□□□□□ -0.07
FIR1P40020 IMT2tM(CAU)P 72 nt14.6□□□□□ -0.07
FIR1P40020 URN1YPR152C 1398 nt14.6□□□□□ -0.07
FIR1P40020 RPN10YHR200W 807 nt14.59□□□□□ -0.07
FIR1P40020 YOL037CYOL037C 354 nt14.54□□□□□ -0.08
FIR1P40020 BSC6YOL137W 1494 nt14.46□□□□□ -0.09
FIR1P40020 MNP1YGL068W 585 nt14.45□□□□□ -0.1
FIR1P40020 YGR021WYGR021W 873 nt14.45□□□□□ -0.1
FIR1P40020 SSA1YAL005C 1929 nt14.45□□□□□ -0.1
FIR1P40020 HOM6YJR139C 1080 nt14.4□□□□□ -0.1
FIR1P40020 PUT4YOR348C 1884 nt14.4□□□□□ -0.1
FIR1P40020 MOT3YMR070W 1473 nt14.35□□□□□ -0.11
FIR1P40020 Q0182Q0182 405 nt14.33□□□□□ -0.12
FIR1P40020 SRB2YHR041C 633 nt14.31□□□□□ -0.12
FIR1P40020 WWM1YFL010C 636 nt14.28□□□□□ -0.12
FIR1P40020 PUS2YGL063W 1113 nt14.24□□□□□ -0.13
FIR1P40020 OPI9YLR338W 858 nt14.22□□□□□ -0.13
FIR1P40020 RKM5YLR137W 1104 nt14.2□□□□□ -0.14
FIR1P40020 SAH1YER043C 1350 nt14.13□□□□□ -0.15
FIR1P40020 YLR281CYLR281C 468 nt14.12□□□□□ -0.15
FIR1P40020 ARE1YCR048W 1833 nt14.1□□□□□ -0.15
FIR1P40020 MRPL8YJL063C 717 nt14.07□□□□□ -0.16
FIR1P40020 YFL021C-AYFL021C-A 855 nt14.05□□□□□ -0.16
FIR1P40020 YJR018WYJR018W 363 nt13.97□□□□□ -0.17
FIR1P40020 WHI5YOR083W 888 nt13.97□□□□□ -0.17
FIR1P40020 POA1YBR022W 534 nt13.94□□□□□ -0.18
FIR1P40020 RPP2BYDR382W 333 nt13.93□□□□□ -0.18
FIR1P40020 YHR049C-AYHR049C-A 297 nt13.93□□□□□ -0.18
FIR1P40020 FMP45YDL222C 930 nt13.89□□□□□ -0.19
FIR1P40020 YJR120WYJR120W 351 nt13.86□□□□□ -0.19
FIR1P40020 UBX6YJL048C 1191 nt13.85□□□□□ -0.19
FIR1P40020 PUN1YLR414C 792 nt13.84□□□□□ -0.19
FIR1P40020 ADO1YJR105W 1023 nt13.83□□□□□ -0.2
FIR1P40020 YCH1YGR203W 447 nt13.8□□□□□ -0.2
FIR1P40020 DSK2YMR276W 1122 nt13.77□□□□□ -0.21
FIR1P40020 SSA3YBL075C 1950 nt13.75□□□□□ -0.21
FIR1P40020 BDH2YAL061W 1254 nt13.75□□□□□ -0.21
FIR1P40020 YPR011CYPR011C 981 nt13.73□□□□□ -0.21
FIR1P40020 LSM3YLR438C-A 270 nt13.72□□□□□ -0.21
FIR1P40020 IMP2'YIL154C 1041 nt13.68□□□□□ -0.22
FIR1P40020 YEL076C-AYEL076C-A 651 nt13.67□□□□□ -0.22
FIR1P40020 YEL076CYEL076C 651 nt13.67□□□□□ -0.22
FIR1P40020 YLR464WYLR464W 651 nt13.67□□□□□ -0.22
FIR1P40020 YLR236CYLR236C 324 nt13.66□□□□□ -0.22
FIR1P40020 PTC2YER089C 1395 nt13.63□□□□□ -0.23
FIR1P40020 BUD23YCR047C 828 nt13.6□□□□□ -0.23
FIR1P40020 SIS1YNL007C 1059 nt13.48□□□□□ -0.25
FIR1P40020 RTG1YOL067C 534 nt13.48□□□□□ -0.25
FIR1P40020 NAB2YGL122C 1578 nt13.47□□□□□ -0.25
FIR1P40020 YLR154C-GYLR154C-G 150 nt13.44□□□□□ -0.26
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms