Protein–RNA interactions for Protein: P21576

VPS1, Vacuolar protein sorting-associated protein 1, yeastyeast

Known RBP Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS1P21576 YML009W-BYML009W-B 477 nt23.19■■□□□ 1.3
VPS1P21576 NSR1YGR159C 1245 nt23.05■■□□□ 1.28
VPS1P21576 NOP1YDL014W 984 nt22.41■■□□□ 1.18
VPS1P21576 YKL036CYKL036C 393 nt20.71■□□□□ 0.91
VPS1P21576 MDJ1YFL016C 1536 nt20.63■□□□□ 0.89
VPS1P21576 Q0297Q0297 156 nt19.69■□□□□ 0.74
VPS1P21576 SRX1YKL086W 384 nt19.66■□□□□ 0.74
VPS1P21576 YJL027CYJL027C 417 nt19.32■□□□□ 0.68
VPS1P21576 SCS3YGL126W 1143 nt18.89■□□□□ 0.61
VPS1P21576 YCR051WYCR051W 669 nt18.66■□□□□ 0.58
VPS1P21576 DBP2YNL112W 1641 nt18.29■□□□□ 0.52
VPS1P21576 YOL085CYOL085C 342 nt18.01■□□□□ 0.47
VPS1P21576 TRN1tP(UGG)A 72 nt17.84■□□□□ 0.45
VPS1P21576 SUF9tP(UGG)F 72 nt17.84■□□□□ 0.45
VPS1P21576 SUF8tP(UGG)H 72 nt17.84■□□□□ 0.45
VPS1P21576 tP(UGG)LtP(UGG)L 72 nt17.84■□□□□ 0.45
VPS1P21576 SUF7tP(UGG)M 72 nt17.84■□□□□ 0.45
VPS1P21576 tP(UGG)N1tP(UGG)N1 72 nt17.84■□□□□ 0.45
VPS1P21576 tP(UGG)N2tP(UGG)N2 72 nt17.84■□□□□ 0.45
VPS1P21576 tP(UGG)O1tP(UGG)O1 72 nt17.84■□□□□ 0.45
VPS1P21576 SUF11tP(UGG)O2 72 nt17.84■□□□□ 0.45
VPS1P21576 PKP1YIL042C 1185 nt17.79■□□□□ 0.44
VPS1P21576 CCC1YLR220W 969 nt17.69■□□□□ 0.42
VPS1P21576 RPP1BYDL130W 321 nt17.67■□□□□ 0.42
VPS1P21576 YBR190WYBR190W 312 nt17.5■□□□□ 0.39
VPS1P21576 RTC3YHR087W 336 nt17.11■□□□□ 0.33
VPS1P21576 SCJ1YMR214W 1134 nt17.07■□□□□ 0.32
VPS1P21576 PET122YER153C 765 nt16.96■□□□□ 0.31
VPS1P21576 RVS167YDR388W 1449 nt16.94■□□□□ 0.3
VPS1P21576 tP(UGG)O3tP(UGG)O3 72 nt16.87■□□□□ 0.29
VPS1P21576 ATS1YAL020C 1002 nt16.87■□□□□ 0.29
VPS1P21576 SCR1SCR1 522 nt16.6■□□□□ 0.25
VPS1P21576 RRN5YLR141W 1092 nt16.46■□□□□ 0.23
VPS1P21576 SHR5YOL110W 714 nt16.43■□□□□ 0.22
VPS1P21576 YDJ1YNL064C 1230 nt16.27■□□□□ 0.2
VPS1P21576 YER088W-BYER088W-B 147 nt16.14■□□□□ 0.17
VPS1P21576 DEP1YAL013W 1218 nt16.08■□□□□ 0.16
VPS1P21576 URN1YPR152C 1398 nt16.04■□□□□ 0.16
VPS1P21576 RSB1YOR049C 1065 nt16.04■□□□□ 0.16
VPS1P21576 PUT4YOR348C 1884 nt16.03■□□□□ 0.16
VPS1P21576 GAR1YHR089C 618 nt15.97■□□□□ 0.15
VPS1P21576 OPI9YLR338W 858 nt15.8■□□□□ 0.12
VPS1P21576 SAH1YER043C 1350 nt15.78■□□□□ 0.12
VPS1P21576 ARE1YCR048W 1833 nt15.74■□□□□ 0.11
VPS1P21576 YNL208WYNL208W 600 nt15.71■□□□□ 0.11
VPS1P21576 PST2YDR032C 597 nt15.66■□□□□ 0.1
VPS1P21576 RPN10YHR200W 807 nt15.65■□□□□ 0.1
VPS1P21576 POA1YBR022W 534 nt15.53■□□□□ 0.08
VPS1P21576 YHR049C-AYHR049C-A 297 nt15.48■□□□□ 0.07
VPS1P21576 TIR1YER011W 765 nt15.43■□□□□ 0.06
VPS1P21576 SSA1YAL005C 1929 nt15.33■□□□□ 0.04
VPS1P21576 YJR018WYJR018W 363 nt15.28■□□□□ 0.04
VPS1P21576 PUN1YLR414C 792 nt15.28■□□□□ 0.04
VPS1P21576 SRB2YHR041C 633 nt15.2■□□□□ 0.02
VPS1P21576 YJR120WYJR120W 351 nt15.2■□□□□ 0.02
VPS1P21576 PTC2YER089C 1395 nt15.19■□□□□ 0.02
VPS1P21576 BSC6YOL137W 1494 nt15.19■□□□□ 0.02
VPS1P21576 SSA3YBL075C 1950 nt15.15■□□□□ 0.02
VPS1P21576 BUD23YCR047C 828 nt15.1■□□□□ 0.01
VPS1P21576 SHU1YHL006C 453 nt15.06■□□□□ 0
VPS1P21576 NAB2YGL122C 1578 nt14.94□□□□□ -0.02
VPS1P21576 YKL097CYKL097C 411 nt14.93□□□□□ -0.02
VPS1P21576 YAL037C-BYAL037C-B 975 nt14.89□□□□□ -0.03
VPS1P21576 RPP2BYDR382W 333 nt14.85□□□□□ -0.03
VPS1P21576 FIS1YIL065C 468 nt14.81□□□□□ -0.04
VPS1P21576 WWM1YFL010C 636 nt14.8□□□□□ -0.04
VPS1P21576 DAL1YIR027C 1383 nt14.75□□□□□ -0.05
VPS1P21576 FPR4YLR449W 1179 nt14.73□□□□□ -0.05
VPS1P21576 INM2YDR287W 879 nt14.68□□□□□ -0.06
VPS1P21576 PHO4YFR034C 939 nt14.64□□□□□ -0.07
VPS1P21576 BDH2YAL061W 1254 nt14.64□□□□□ -0.07
VPS1P21576 SPT5YML010W 3192 nt14.61□□□□□ -0.07
VPS1P21576 HOM6YJR139C 1080 nt14.61□□□□□ -0.07
VPS1P21576 MNP1YGL068W 585 nt14.58□□□□□ -0.08
VPS1P21576 YBL100CYBL100C 315 nt14.58□□□□□ -0.08
VPS1P21576 YGR021WYGR021W 873 nt14.53□□□□□ -0.08
VPS1P21576 YOR139CYOR139C 393 nt14.47□□□□□ -0.09
VPS1P21576 YFL021C-AYFL021C-A 855 nt14.45□□□□□ -0.1
VPS1P21576 FUN26YAL022C 1554 nt14.43□□□□□ -0.1
VPS1P21576 LSM3YLR438C-A 270 nt14.4□□□□□ -0.1
VPS1P21576 YPS1YLR120C 1710 nt14.38□□□□□ -0.11
VPS1P21576 RKM5YLR137W 1104 nt14.38□□□□□ -0.11
VPS1P21576 TRM9YML014W 840 nt14.34□□□□□ -0.11
VPS1P21576 YDR095CYDR095C 411 nt14.28□□□□□ -0.12
VPS1P21576 MEP2YNL142W 1500 nt14.24□□□□□ -0.13
VPS1P21576 CCT6YDR188W 1641 nt14.23□□□□□ -0.13
VPS1P21576 NPL3YDR432W 1245 nt14.21□□□□□ -0.13
VPS1P21576 YHR165W-AYHR165W-A 312 nt14.18□□□□□ -0.14
VPS1P21576 YOL037CYOL037C 354 nt14.16□□□□□ -0.14
VPS1P21576 ALF1YNL148C 765 nt14.15□□□□□ -0.14
VPS1P21576 DCW1YKL046C 1350 nt14.1□□□□□ -0.15
VPS1P21576 PTP1YDL230W 1008 nt14.06□□□□□ -0.16
VPS1P21576 SIS1YNL007C 1059 nt14.04□□□□□ -0.16
VPS1P21576 SUF2tP(AGG)C 72 nt14.01□□□□□ -0.17
VPS1P21576 SUF10tP(AGG)N 72 nt14.01□□□□□ -0.17
VPS1P21576 SSA4YER103W 1929 nt14□□□□□ -0.17
VPS1P21576 RPP2AYOL039W 321 nt13.99□□□□□ -0.17
VPS1P21576 CAC2YML102W 1407 nt13.97□□□□□ -0.17
VPS1P21576 YLR281CYLR281C 468 nt13.94□□□□□ -0.18
VPS1P21576 WHI5YOR083W 888 nt13.91□□□□□ -0.18
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms