Protein–RNA interactions for Protein: P39702

VPS8, Vacuolar protein sorting-associated protein 8, yeastyeast

Predictions only

Length 1,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS8P39702 YML009W-BYML009W-B 477 nt23.75■■□□□ 1.39
VPS8P39702 NSR1YGR159C 1245 nt23.46■■□□□ 1.35
VPS8P39702 NOP1YDL014W 984 nt23.19■■□□□ 1.3
VPS8P39702 YKL036CYKL036C 393 nt21.57■■□□□ 1.04
VPS8P39702 MDJ1YFL016C 1536 nt20.61■□□□□ 0.89
VPS8P39702 Q0297Q0297 156 nt20.36■□□□□ 0.85
VPS8P39702 SRX1YKL086W 384 nt20.26■□□□□ 0.83
VPS8P39702 YJL027CYJL027C 417 nt20.17■□□□□ 0.82
VPS8P39702 SCS3YGL126W 1143 nt19.72■□□□□ 0.75
VPS8P39702 YCR051WYCR051W 669 nt19.22■□□□□ 0.67
VPS8P39702 YOL085CYOL085C 342 nt18.68■□□□□ 0.58
VPS8P39702 PKP1YIL042C 1185 nt18.36■□□□□ 0.53
VPS8P39702 DBP2YNL112W 1641 nt18.34■□□□□ 0.53
VPS8P39702 RPP1BYDL130W 321 nt18.27■□□□□ 0.52
VPS8P39702 TRN1tP(UGG)A 72 nt18.2■□□□□ 0.5
VPS8P39702 SUF9tP(UGG)F 72 nt18.2■□□□□ 0.5
VPS8P39702 SUF8tP(UGG)H 72 nt18.2■□□□□ 0.5
VPS8P39702 tP(UGG)LtP(UGG)L 72 nt18.2■□□□□ 0.5
VPS8P39702 SUF7tP(UGG)M 72 nt18.2■□□□□ 0.5
VPS8P39702 tP(UGG)N1tP(UGG)N1 72 nt18.2■□□□□ 0.5
VPS8P39702 tP(UGG)N2tP(UGG)N2 72 nt18.2■□□□□ 0.5
VPS8P39702 tP(UGG)O1tP(UGG)O1 72 nt18.2■□□□□ 0.5
VPS8P39702 SUF11tP(UGG)O2 72 nt18.2■□□□□ 0.5
VPS8P39702 CCC1YLR220W 969 nt18■□□□□ 0.47
VPS8P39702 SCJ1YMR214W 1134 nt17.74■□□□□ 0.43
VPS8P39702 ATS1YAL020C 1002 nt17.7■□□□□ 0.42
VPS8P39702 YBR190WYBR190W 312 nt17.55■□□□□ 0.4
VPS8P39702 PET122YER153C 765 nt17.42■□□□□ 0.38
VPS8P39702 SCR1SCR1 522 nt17.3■□□□□ 0.36
VPS8P39702 RVS167YDR388W 1449 nt17.3■□□□□ 0.36
VPS8P39702 tP(UGG)O3tP(UGG)O3 72 nt17.29■□□□□ 0.36
VPS8P39702 RTC3YHR087W 336 nt17.15■□□□□ 0.34
VPS8P39702 RRN5YLR141W 1092 nt16.95■□□□□ 0.3
VPS8P39702 SHR5YOL110W 714 nt16.74■□□□□ 0.27
VPS8P39702 YDJ1YNL064C 1230 nt16.73■□□□□ 0.27
VPS8P39702 RSB1YOR049C 1065 nt16.65■□□□□ 0.26
VPS8P39702 YER088W-BYER088W-B 147 nt16.62■□□□□ 0.25
VPS8P39702 PST2YDR032C 597 nt16.37■□□□□ 0.21
VPS8P39702 GAR1YHR089C 618 nt16.31■□□□□ 0.2
VPS8P39702 DEP1YAL013W 1218 nt16.18■□□□□ 0.18
VPS8P39702 URN1YPR152C 1398 nt16.13■□□□□ 0.17
VPS8P39702 YNL208WYNL208W 600 nt15.97■□□□□ 0.15
VPS8P39702 RPN10YHR200W 807 nt15.95■□□□□ 0.14
VPS8P39702 OPI9YLR338W 858 nt15.87■□□□□ 0.13
VPS8P39702 SSA3YBL075C 1950 nt15.84■□□□□ 0.13
VPS8P39702 YKL097CYKL097C 411 nt15.82■□□□□ 0.12
VPS8P39702 PUT4YOR348C 1884 nt15.78■□□□□ 0.12
VPS8P39702 TIR1YER011W 765 nt15.76■□□□□ 0.11
VPS8P39702 SAH1YER043C 1350 nt15.7■□□□□ 0.1
VPS8P39702 SHU1YHL006C 453 nt15.65■□□□□ 0.1
VPS8P39702 ARE1YCR048W 1833 nt15.56■□□□□ 0.08
VPS8P39702 SSA1YAL005C 1929 nt15.53■□□□□ 0.08
VPS8P39702 YJR018WYJR018W 363 nt15.41■□□□□ 0.06
VPS8P39702 PUN1YLR414C 792 nt15.41■□□□□ 0.06
VPS8P39702 YHR049C-AYHR049C-A 297 nt15.34■□□□□ 0.05
VPS8P39702 YAL037C-BYAL037C-B 975 nt15.34■□□□□ 0.05
VPS8P39702 SRB2YHR041C 633 nt15.29■□□□□ 0.04
VPS8P39702 POA1YBR022W 534 nt15.29■□□□□ 0.04
VPS8P39702 YJR120WYJR120W 351 nt15.21■□□□□ 0.03
VPS8P39702 PTC2YER089C 1395 nt15.18■□□□□ 0.02
VPS8P39702 RPP2BYDR382W 333 nt15.16■□□□□ 0.02
VPS8P39702 YOR139CYOR139C 393 nt15.15■□□□□ 0.02
VPS8P39702 WWM1YFL010C 636 nt15.09■□□□□ 0.01
VPS8P39702 YGR021WYGR021W 873 nt15.09■□□□□ 0.01
VPS8P39702 HOM6YJR139C 1080 nt15.03■□□□□ -0
VPS8P39702 BUD23YCR047C 828 nt15□□□□□ -0.01
VPS8P39702 NPL3YDR432W 1245 nt14.98□□□□□ -0.01
VPS8P39702 MNP1YGL068W 585 nt14.98□□□□□ -0.01
VPS8P39702 NAB2YGL122C 1578 nt14.97□□□□□ -0.01
VPS8P39702 BSC6YOL137W 1494 nt14.92□□□□□ -0.02
VPS8P39702 BDH2YAL061W 1254 nt14.89□□□□□ -0.03
VPS8P39702 YFL021C-AYFL021C-A 855 nt14.86□□□□□ -0.03
VPS8P39702 INM2YDR287W 879 nt14.85□□□□□ -0.03
VPS8P39702 YOL037CYOL037C 354 nt14.82□□□□□ -0.04
VPS8P39702 RKM5YLR137W 1104 nt14.81□□□□□ -0.04
VPS8P39702 DAL1YIR027C 1383 nt14.81□□□□□ -0.04
VPS8P39702 FIS1YIL065C 468 nt14.76□□□□□ -0.05
VPS8P39702 FPR4YLR449W 1179 nt14.76□□□□□ -0.05
VPS8P39702 LSM3YLR438C-A 270 nt14.75□□□□□ -0.05
VPS8P39702 YBL100CYBL100C 315 nt14.73□□□□□ -0.05
VPS8P39702 PHO4YFR034C 939 nt14.66□□□□□ -0.06
VPS8P39702 TRM9YML014W 840 nt14.58□□□□□ -0.08
VPS8P39702 FUN26YAL022C 1554 nt14.56□□□□□ -0.08
VPS8P39702 tM(CAU)CtM(CAU)C 72 nt14.55□□□□□ -0.08
VPS8P39702 IMT4tM(CAU)E 72 nt14.55□□□□□ -0.08
VPS8P39702 IMT3tM(CAU)J3 72 nt14.55□□□□□ -0.08
VPS8P39702 IMT1tM(CAU)O1 72 nt14.55□□□□□ -0.08
VPS8P39702 IMT2tM(CAU)P 72 nt14.55□□□□□ -0.08
VPS8P39702 YLR281CYLR281C 468 nt14.46□□□□□ -0.09
VPS8P39702 CCT6YDR188W 1641 nt14.43□□□□□ -0.1
VPS8P39702 PUS2YGL063W 1113 nt14.38□□□□□ -0.11
VPS8P39702 WHI5YOR083W 888 nt14.38□□□□□ -0.11
VPS8P39702 ALF1YNL148C 765 nt14.31□□□□□ -0.12
VPS8P39702 YPS1YLR120C 1710 nt14.31□□□□□ -0.12
VPS8P39702 SUF2tP(AGG)C 72 nt14.28□□□□□ -0.12
VPS8P39702 SUF10tP(AGG)N 72 nt14.28□□□□□ -0.12
VPS8P39702 YDR095CYDR095C 411 nt14.25□□□□□ -0.13
VPS8P39702 SPT5YML010W 3192 nt14.24□□□□□ -0.13
VPS8P39702 YLR154C-GYLR154C-G 150 nt14.21□□□□□ -0.13
VPS8P39702 SSA4YER103W 1929 nt14.17□□□□□ -0.14
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms