Protein–RNA interactions for Protein: P32583

SRP40, Suppressor protein SRP40, yeastyeast

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SRP40P32583 YML009W-BYML009W-B 477 nt23.12■■□□□ 1.29
SRP40P32583 NOP1YDL014W 984 nt22.69■■□□□ 1.22
SRP40P32583 NSR1YGR159C 1245 nt22.66■■□□□ 1.22
SRP40P32583 YKL036CYKL036C 393 nt21.33■■□□□ 1.01
SRP40P32583 MDJ1YFL016C 1536 nt20.48■□□□□ 0.87
SRP40P32583 Q0297Q0297 156 nt20.02■□□□□ 0.8
SRP40P32583 YJL027CYJL027C 417 nt19.98■□□□□ 0.79
SRP40P32583 SRX1YKL086W 384 nt19.84■□□□□ 0.77
SRP40P32583 SCS3YGL126W 1143 nt19.62■□□□□ 0.73
SRP40P32583 YCR051WYCR051W 669 nt18.82■□□□□ 0.6
SRP40P32583 YOL085CYOL085C 342 nt18.47■□□□□ 0.55
SRP40P32583 PKP1YIL042C 1185 nt18.1■□□□□ 0.49
SRP40P32583 DBP2YNL112W 1641 nt18.01■□□□□ 0.47
SRP40P32583 SCJ1YMR214W 1134 nt17.97■□□□□ 0.47
SRP40P32583 RPP1BYDL130W 321 nt17.96■□□□□ 0.47
SRP40P32583 ATS1YAL020C 1002 nt17.69■□□□□ 0.42
SRP40P32583 TRN1tP(UGG)A 72 nt17.67■□□□□ 0.42
SRP40P32583 SUF9tP(UGG)F 72 nt17.67■□□□□ 0.42
SRP40P32583 SUF8tP(UGG)H 72 nt17.67■□□□□ 0.42
SRP40P32583 tP(UGG)LtP(UGG)L 72 nt17.67■□□□□ 0.42
SRP40P32583 SUF7tP(UGG)M 72 nt17.67■□□□□ 0.42
SRP40P32583 tP(UGG)N1tP(UGG)N1 72 nt17.67■□□□□ 0.42
SRP40P32583 tP(UGG)N2tP(UGG)N2 72 nt17.67■□□□□ 0.42
SRP40P32583 tP(UGG)O1tP(UGG)O1 72 nt17.67■□□□□ 0.42
SRP40P32583 SUF11tP(UGG)O2 72 nt17.67■□□□□ 0.42
SRP40P32583 CCC1YLR220W 969 nt17.47■□□□□ 0.39
SRP40P32583 YBR190WYBR190W 312 nt17.43■□□□□ 0.38
SRP40P32583 PET122YER153C 765 nt17.08■□□□□ 0.32
SRP40P32583 RTC3YHR087W 336 nt17.03■□□□□ 0.32
SRP40P32583 SCR1SCR1 522 nt17.03■□□□□ 0.32
SRP40P32583 tP(UGG)O3tP(UGG)O3 72 nt16.86■□□□□ 0.29
SRP40P32583 RVS167YDR388W 1449 nt16.65■□□□□ 0.26
SRP40P32583 RRN5YLR141W 1092 nt16.64■□□□□ 0.25
SRP40P32583 RSB1YOR049C 1065 nt16.41■□□□□ 0.22
SRP40P32583 PST2YDR032C 597 nt16.33■□□□□ 0.2
SRP40P32583 YDJ1YNL064C 1230 nt16.33■□□□□ 0.2
SRP40P32583 YER088W-BYER088W-B 147 nt16.32■□□□□ 0.2
SRP40P32583 SHR5YOL110W 714 nt16.18■□□□□ 0.18
SRP40P32583 PUT4YOR348C 1884 nt16.16■□□□□ 0.18
SRP40P32583 YKL097CYKL097C 411 nt15.88■□□□□ 0.13
SRP40P32583 URN1YPR152C 1398 nt15.86■□□□□ 0.13
SRP40P32583 GAR1YHR089C 618 nt15.85■□□□□ 0.13
SRP40P32583 SSA3YBL075C 1950 nt15.84■□□□□ 0.13
SRP40P32583 DEP1YAL013W 1218 nt15.83■□□□□ 0.12
SRP40P32583 ARE1YCR048W 1833 nt15.78■□□□□ 0.12
SRP40P32583 SAH1YER043C 1350 nt15.73■□□□□ 0.11
SRP40P32583 OPI9YLR338W 858 nt15.68■□□□□ 0.1
SRP40P32583 POA1YBR022W 534 nt15.63■□□□□ 0.09
SRP40P32583 Q0182Q0182 405 nt15.6■□□□□ 0.09
SRP40P32583 YHR049C-AYHR049C-A 297 nt15.56■□□□□ 0.08
SRP40P32583 SHU1YHL006C 453 nt15.53■□□□□ 0.08
SRP40P32583 YNL208WYNL208W 600 nt15.43■□□□□ 0.06
SRP40P32583 RPN10YHR200W 807 nt15.41■□□□□ 0.06
SRP40P32583 BSC6YOL137W 1494 nt15.35■□□□□ 0.05
SRP40P32583 TIR1YER011W 765 nt15.32■□□□□ 0.04
SRP40P32583 YOR139CYOR139C 393 nt15.18■□□□□ 0.02
SRP40P32583 PUN1YLR414C 792 nt15.16■□□□□ 0.02
SRP40P32583 YAL037C-BYAL037C-B 975 nt15.15■□□□□ 0.02
SRP40P32583 BUD23YCR047C 828 nt15.14■□□□□ 0.01
SRP40P32583 PTC2YER089C 1395 nt15.11■□□□□ 0.01
SRP40P32583 YJR018WYJR018W 363 nt15.09■□□□□ 0.01
SRP40P32583 SSA1YAL005C 1929 nt15.05■□□□□ -0
SRP40P32583 MOT3YMR070W 1473 nt15.01□□□□□ -0.01
SRP40P32583 YJR120WYJR120W 351 nt14.96□□□□□ -0.01
SRP40P32583 NPL3YDR432W 1245 nt14.93□□□□□ -0.02
SRP40P32583 SPT5YML010W 3192 nt14.93□□□□□ -0.02
SRP40P32583 NAB2YGL122C 1578 nt14.9□□□□□ -0.02
SRP40P32583 SRB2YHR041C 633 nt14.87□□□□□ -0.03
SRP40P32583 YGR021WYGR021W 873 nt14.78□□□□□ -0.04
SRP40P32583 FIS1YIL065C 468 nt14.77□□□□□ -0.05
SRP40P32583 HOM6YJR139C 1080 nt14.75□□□□□ -0.05
SRP40P32583 WWM1YFL010C 636 nt14.71□□□□□ -0.05
SRP40P32583 MNP1YGL068W 585 nt14.7□□□□□ -0.06
SRP40P32583 YOL037CYOL037C 354 nt14.67□□□□□ -0.06
SRP40P32583 DAL1YIR027C 1383 nt14.66□□□□□ -0.06
SRP40P32583 FPR4YLR449W 1179 nt14.64□□□□□ -0.07
SRP40P32583 RPP2BYDR382W 333 nt14.6□□□□□ -0.07
SRP40P32583 PHO4YFR034C 939 nt14.56□□□□□ -0.08
SRP40P32583 tM(CAU)CtM(CAU)C 72 nt14.56□□□□□ -0.08
SRP40P32583 IMT4tM(CAU)E 72 nt14.56□□□□□ -0.08
SRP40P32583 IMT3tM(CAU)J3 72 nt14.56□□□□□ -0.08
SRP40P32583 IMT1tM(CAU)O1 72 nt14.56□□□□□ -0.08
SRP40P32583 IMT2tM(CAU)P 72 nt14.56□□□□□ -0.08
SRP40P32583 INM2YDR287W 879 nt14.53□□□□□ -0.08
SRP40P32583 RKM5YLR137W 1104 nt14.52□□□□□ -0.09
SRP40P32583 YFL021C-AYFL021C-A 855 nt14.49□□□□□ -0.09
SRP40P32583 SSA4YER103W 1929 nt14.49□□□□□ -0.09
SRP40P32583 MEP2YNL142W 1500 nt14.41□□□□□ -0.1
SRP40P32583 YBL100CYBL100C 315 nt14.4□□□□□ -0.1
SRP40P32583 YPS1YLR120C 1710 nt14.39□□□□□ -0.11
SRP40P32583 BDH2YAL061W 1254 nt14.38□□□□□ -0.11
SRP40P32583 YLR281CYLR281C 468 nt14.3□□□□□ -0.12
SRP40P32583 LSM3YLR438C-A 270 nt14.3□□□□□ -0.12
SRP40P32583 PUS2YGL063W 1113 nt14.28□□□□□ -0.12
SRP40P32583 DCW1YKL046C 1350 nt14.28□□□□□ -0.12
SRP40P32583 YDR095CYDR095C 411 nt14.25□□□□□ -0.13
SRP40P32583 FUN26YAL022C 1554 nt14.24□□□□□ -0.13
SRP40P32583 YHR165W-AYHR165W-A 312 nt14.21□□□□□ -0.13
SRP40P32583 WHI5YOR083W 888 nt14.18□□□□□ -0.14
SRP40P32583 TRM9YML014W 840 nt14.09□□□□□ -0.15
Retrieved 100 of 7,029 protein–RNA pairs in 8.5 ms