Protein–RNA interactions for Protein: P47138

JJJ3, Diphthamide biosynthesis protein 4, yeastyeast

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
JJJ3P47138 YML009W-BYML009W-B 477 nt22.45■■□□□ 1.18
JJJ3P47138 NSR1YGR159C 1245 nt22.09■■□□□ 1.13
JJJ3P47138 NOP1YDL014W 984 nt21.96■■□□□ 1.11
JJJ3P47138 YKL036CYKL036C 393 nt20.46■□□□□ 0.87
JJJ3P47138 MDJ1YFL016C 1536 nt19.35■□□□□ 0.69
JJJ3P47138 Q0297Q0297 156 nt19.24■□□□□ 0.67
JJJ3P47138 YJL027CYJL027C 417 nt19.16■□□□□ 0.66
JJJ3P47138 SRX1YKL086W 384 nt19.14■□□□□ 0.65
JJJ3P47138 SCS3YGL126W 1143 nt18.69■□□□□ 0.58
JJJ3P47138 YCR051WYCR051W 669 nt18.23■□□□□ 0.51
JJJ3P47138 YOL085CYOL085C 342 nt17.69■□□□□ 0.42
JJJ3P47138 PKP1YIL042C 1185 nt17.41■□□□□ 0.38
JJJ3P47138 RPP1BYDL130W 321 nt17.28■□□□□ 0.36
JJJ3P47138 DBP2YNL112W 1641 nt17.16■□□□□ 0.34
JJJ3P47138 TRN1tP(UGG)A 72 nt17.12■□□□□ 0.33
JJJ3P47138 SUF9tP(UGG)F 72 nt17.12■□□□□ 0.33
JJJ3P47138 SUF8tP(UGG)H 72 nt17.12■□□□□ 0.33
JJJ3P47138 tP(UGG)LtP(UGG)L 72 nt17.12■□□□□ 0.33
JJJ3P47138 SUF7tP(UGG)M 72 nt17.12■□□□□ 0.33
JJJ3P47138 tP(UGG)N1tP(UGG)N1 72 nt17.12■□□□□ 0.33
JJJ3P47138 tP(UGG)N2tP(UGG)N2 72 nt17.12■□□□□ 0.33
JJJ3P47138 tP(UGG)O1tP(UGG)O1 72 nt17.12■□□□□ 0.33
JJJ3P47138 SUF11tP(UGG)O2 72 nt17.12■□□□□ 0.33
JJJ3P47138 CCC1YLR220W 969 nt17.04■□□□□ 0.32
JJJ3P47138 SCJ1YMR214W 1134 nt16.89■□□□□ 0.29
JJJ3P47138 ATS1YAL020C 1002 nt16.8■□□□□ 0.28
JJJ3P47138 PET122YER153C 765 nt16.46■□□□□ 0.23
JJJ3P47138 YBR190WYBR190W 312 nt16.46■□□□□ 0.23
JJJ3P47138 SCR1SCR1 522 nt16.43■□□□□ 0.22
JJJ3P47138 RVS167YDR388W 1449 nt16.32■□□□□ 0.2
JJJ3P47138 tP(UGG)O3tP(UGG)O3 72 nt16.32■□□□□ 0.2
JJJ3P47138 RTC3YHR087W 336 nt16.18■□□□□ 0.18
JJJ3P47138 RRN5YLR141W 1092 nt16.04■□□□□ 0.16
JJJ3P47138 RSB1YOR049C 1065 nt15.81■□□□□ 0.12
JJJ3P47138 YDJ1YNL064C 1230 nt15.78■□□□□ 0.12
JJJ3P47138 SHR5YOL110W 714 nt15.76■□□□□ 0.11
JJJ3P47138 YER088W-BYER088W-B 147 nt15.7■□□□□ 0.1
JJJ3P47138 PST2YDR032C 597 nt15.51■□□□□ 0.07
JJJ3P47138 GAR1YHR089C 618 nt15.42■□□□□ 0.06
JJJ3P47138 DEP1YAL013W 1218 nt15.25■□□□□ 0.03
JJJ3P47138 URN1YPR152C 1398 nt15.18■□□□□ 0.02
JJJ3P47138 YKL097CYKL097C 411 nt15.07■□□□□ 0
JJJ3P47138 RPN10YHR200W 807 nt15.06■□□□□ 0
JJJ3P47138 YNL208WYNL208W 600 nt15.04■□□□□ -0
JJJ3P47138 OPI9YLR338W 858 nt14.89□□□□□ -0.03
JJJ3P47138 TIR1YER011W 765 nt14.88□□□□□ -0.03
JJJ3P47138 SHU1YHL006C 453 nt14.82□□□□□ -0.04
JJJ3P47138 SAH1YER043C 1350 nt14.74□□□□□ -0.05
JJJ3P47138 PUT4YOR348C 1884 nt14.68□□□□□ -0.06
JJJ3P47138 SSA1YAL005C 1929 nt14.6□□□□□ -0.07
JJJ3P47138 YAL037C-BYAL037C-B 975 nt14.55□□□□□ -0.08
JJJ3P47138 YJR018WYJR018W 363 nt14.52□□□□□ -0.09
JJJ3P47138 ARE1YCR048W 1833 nt14.5□□□□□ -0.09
JJJ3P47138 PUN1YLR414C 792 nt14.49□□□□□ -0.09
JJJ3P47138 YHR049C-AYHR049C-A 297 nt14.36□□□□□ -0.11
JJJ3P47138 YOR139CYOR139C 393 nt14.35□□□□□ -0.11
JJJ3P47138 SRB2YHR041C 633 nt14.34□□□□□ -0.11
JJJ3P47138 RPP2BYDR382W 333 nt14.33□□□□□ -0.12
JJJ3P47138 POA1YBR022W 534 nt14.32□□□□□ -0.12
JJJ3P47138 YGR021WYGR021W 873 nt14.27□□□□□ -0.13
JJJ3P47138 PTC2YER089C 1395 nt14.26□□□□□ -0.13
JJJ3P47138 NPL3YDR432W 1245 nt14.26□□□□□ -0.13
JJJ3P47138 WWM1YFL010C 636 nt14.25□□□□□ -0.13
JJJ3P47138 YJR120WYJR120W 351 nt14.23□□□□□ -0.13
JJJ3P47138 HOM6YJR139C 1080 nt14.18□□□□□ -0.14
JJJ3P47138 MNP1YGL068W 585 nt14.14□□□□□ -0.15
JJJ3P47138 BUD23YCR047C 828 nt14.11□□□□□ -0.15
JJJ3P47138 NAB2YGL122C 1578 nt14.05□□□□□ -0.16
JJJ3P47138 YOL037CYOL037C 354 nt14.04□□□□□ -0.16
JJJ3P47138 YFL021C-AYFL021C-A 855 nt14.03□□□□□ -0.16
JJJ3P47138 BDH2YAL061W 1254 nt14.03□□□□□ -0.16
JJJ3P47138 INM2YDR287W 879 nt13.99□□□□□ -0.17
JJJ3P47138 RKM5YLR137W 1104 nt13.98□□□□□ -0.17
JJJ3P47138 FPR4YLR449W 1179 nt13.94□□□□□ -0.18
JJJ3P47138 BSC6YOL137W 1494 nt13.93□□□□□ -0.18
JJJ3P47138 LSM3YLR438C-A 270 nt13.91□□□□□ -0.18
JJJ3P47138 DAL1YIR027C 1383 nt13.9□□□□□ -0.18
JJJ3P47138 YBL100CYBL100C 315 nt13.86□□□□□ -0.19
JJJ3P47138 SSA3YBL075C 1950 nt13.83□□□□□ -0.2
JJJ3P47138 tM(CAU)CtM(CAU)C 72 nt13.8□□□□□ -0.2
JJJ3P47138 IMT4tM(CAU)E 72 nt13.8□□□□□ -0.2
JJJ3P47138 IMT3tM(CAU)J3 72 nt13.8□□□□□ -0.2
JJJ3P47138 IMT1tM(CAU)O1 72 nt13.8□□□□□ -0.2
JJJ3P47138 IMT2tM(CAU)P 72 nt13.8□□□□□ -0.2
JJJ3P47138 FIS1YIL065C 468 nt13.78□□□□□ -0.2
JJJ3P47138 TRM9YML014W 840 nt13.78□□□□□ -0.2
JJJ3P47138 PHO4YFR034C 939 nt13.75□□□□□ -0.21
JJJ3P47138 FUN26YAL022C 1554 nt13.7□□□□□ -0.22
JJJ3P47138 YLR281CYLR281C 468 nt13.68□□□□□ -0.22
JJJ3P47138 PUS2YGL063W 1113 nt13.67□□□□□ -0.22
JJJ3P47138 WHI5YOR083W 888 nt13.63□□□□□ -0.23
JJJ3P47138 CCT6YDR188W 1641 nt13.54□□□□□ -0.24
JJJ3P47138 ALF1YNL148C 765 nt13.52□□□□□ -0.25
JJJ3P47138 SUF2tP(AGG)C 72 nt13.48□□□□□ -0.25
JJJ3P47138 SUF10tP(AGG)N 72 nt13.48□□□□□ -0.25
JJJ3P47138 YLR154C-GYLR154C-G 150 nt13.43□□□□□ -0.26
JJJ3P47138 YPS1YLR120C 1710 nt13.37□□□□□ -0.27
JJJ3P47138 IMP2'YIL154C 1041 nt13.36□□□□□ -0.27
JJJ3P47138 DSK2YMR276W 1122 nt13.36□□□□□ -0.27
JJJ3P47138 MOT3YMR070W 1473 nt13.35□□□□□ -0.27
Retrieved 100 of 7,029 protein–RNA pairs in 16.6 ms