Protein–RNA interactions for Protein: P53075

SHE10, Outer spore wall assembly protein SHE10, yeastyeast

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE10P53075 YML009W-BYML009W-B 477 nt22.34■■□□□ 1.17
SHE10P53075 NSR1YGR159C 1245 nt22.06■■□□□ 1.12
SHE10P53075 NOP1YDL014W 984 nt21.79■■□□□ 1.08
SHE10P53075 YKL036CYKL036C 393 nt20.18■□□□□ 0.82
SHE10P53075 MDJ1YFL016C 1536 nt19.45■□□□□ 0.7
SHE10P53075 Q0297Q0297 156 nt19.03■□□□□ 0.64
SHE10P53075 SRX1YKL086W 384 nt18.98■□□□□ 0.63
SHE10P53075 YJL027CYJL027C 417 nt18.88■□□□□ 0.61
SHE10P53075 SCS3YGL126W 1143 nt18.37■□□□□ 0.53
SHE10P53075 YCR051WYCR051W 669 nt18.08■□□□□ 0.48
SHE10P53075 YOL085CYOL085C 342 nt17.43■□□□□ 0.38
SHE10P53075 DBP2YNL112W 1641 nt17.18■□□□□ 0.34
SHE10P53075 PKP1YIL042C 1185 nt17.18■□□□□ 0.34
SHE10P53075 RPP1BYDL130W 321 nt17.1■□□□□ 0.33
SHE10P53075 TRN1tP(UGG)A 72 nt17.06■□□□□ 0.32
SHE10P53075 SUF9tP(UGG)F 72 nt17.06■□□□□ 0.32
SHE10P53075 SUF8tP(UGG)H 72 nt17.06■□□□□ 0.32
SHE10P53075 tP(UGG)LtP(UGG)L 72 nt17.06■□□□□ 0.32
SHE10P53075 SUF7tP(UGG)M 72 nt17.06■□□□□ 0.32
SHE10P53075 tP(UGG)N1tP(UGG)N1 72 nt17.06■□□□□ 0.32
SHE10P53075 tP(UGG)N2tP(UGG)N2 72 nt17.06■□□□□ 0.32
SHE10P53075 tP(UGG)O1tP(UGG)O1 72 nt17.06■□□□□ 0.32
SHE10P53075 SUF11tP(UGG)O2 72 nt17.06■□□□□ 0.32
SHE10P53075 CCC1YLR220W 969 nt16.97■□□□□ 0.31
SHE10P53075 YBR190WYBR190W 312 nt16.57■□□□□ 0.24
SHE10P53075 ATS1YAL020C 1002 nt16.47■□□□□ 0.23
SHE10P53075 SCJ1YMR214W 1134 nt16.44■□□□□ 0.22
SHE10P53075 RVS167YDR388W 1449 nt16.36■□□□□ 0.21
SHE10P53075 PET122YER153C 765 nt16.3■□□□□ 0.2
SHE10P53075 RTC3YHR087W 336 nt16.29■□□□□ 0.2
SHE10P53075 SCR1SCR1 522 nt16.26■□□□□ 0.19
SHE10P53075 tP(UGG)O3tP(UGG)O3 72 nt16.2■□□□□ 0.18
SHE10P53075 RRN5YLR141W 1092 nt15.86■□□□□ 0.13
SHE10P53075 SHR5YOL110W 714 nt15.74■□□□□ 0.11
SHE10P53075 YDJ1YNL064C 1230 nt15.67■□□□□ 0.1
SHE10P53075 RSB1YOR049C 1065 nt15.62■□□□□ 0.09
SHE10P53075 YER088W-BYER088W-B 147 nt15.53■□□□□ 0.08
SHE10P53075 SSA3YBL075C 1950 nt15.51■□□□□ 0.07
SHE10P53075 GAR1YHR089C 618 nt15.34■□□□□ 0.05
SHE10P53075 DEP1YAL013W 1218 nt15.27■□□□□ 0.04
SHE10P53075 URN1YPR152C 1398 nt15.24■□□□□ 0.03
SHE10P53075 PST2YDR032C 597 nt15.21■□□□□ 0.03
SHE10P53075 RPN10YHR200W 807 nt15.1■□□□□ 0.01
SHE10P53075 YNL208WYNL208W 600 nt15.05■□□□□ -0
SHE10P53075 OPI9YLR338W 858 nt14.97□□□□□ -0.01
SHE10P53075 PUT4YOR348C 1884 nt14.88□□□□□ -0.03
SHE10P53075 SAH1YER043C 1350 nt14.84□□□□□ -0.03
SHE10P53075 TIR1YER011W 765 nt14.8□□□□□ -0.04
SHE10P53075 YKL097CYKL097C 411 nt14.74□□□□□ -0.05
SHE10P53075 ARE1YCR048W 1833 nt14.66□□□□□ -0.06
SHE10P53075 SHU1YHL006C 453 nt14.57□□□□□ -0.08
SHE10P53075 PUN1YLR414C 792 nt14.57□□□□□ -0.08
SHE10P53075 SSA1YAL005C 1929 nt14.55□□□□□ -0.08
SHE10P53075 YJR018WYJR018W 363 nt14.55□□□□□ -0.08
SHE10P53075 YHR049C-AYHR049C-A 297 nt14.52□□□□□ -0.09
SHE10P53075 POA1YBR022W 534 nt14.49□□□□□ -0.09
SHE10P53075 RPP2BYDR382W 333 nt14.36□□□□□ -0.11
SHE10P53075 PTC2YER089C 1395 nt14.35□□□□□ -0.11
SHE10P53075 YAL037C-BYAL037C-B 975 nt14.34□□□□□ -0.11
SHE10P53075 BUD23YCR047C 828 nt14.26□□□□□ -0.13
SHE10P53075 SRB2YHR041C 633 nt14.24□□□□□ -0.13
SHE10P53075 YJR120WYJR120W 351 nt14.21□□□□□ -0.13
SHE10P53075 YGR021WYGR021W 873 nt14.16□□□□□ -0.14
SHE10P53075 NAB2YGL122C 1578 nt14.16□□□□□ -0.14
SHE10P53075 WWM1YFL010C 636 nt14.15□□□□□ -0.14
SHE10P53075 BSC6YOL137W 1494 nt14.12□□□□□ -0.15
SHE10P53075 HOM6YJR139C 1080 nt14.04□□□□□ -0.16
SHE10P53075 YOR139CYOR139C 393 nt14.04□□□□□ -0.16
SHE10P53075 INM2YDR287W 879 nt14.03□□□□□ -0.16
SHE10P53075 FPR4YLR449W 1179 nt14.03□□□□□ -0.16
SHE10P53075 NPL3YDR432W 1245 nt14.02□□□□□ -0.17
SHE10P53075 BDH2YAL061W 1254 nt14.02□□□□□ -0.17
SHE10P53075 MNP1YGL068W 585 nt14□□□□□ -0.17
SHE10P53075 DAL1YIR027C 1383 nt13.99□□□□□ -0.17
SHE10P53075 YFL021C-AYFL021C-A 855 nt13.94□□□□□ -0.18
SHE10P53075 YBL100CYBL100C 315 nt13.91□□□□□ -0.18
SHE10P53075 FIS1YIL065C 468 nt13.89□□□□□ -0.19
SHE10P53075 LSM3YLR438C-A 270 nt13.87□□□□□ -0.19
SHE10P53075 RKM5YLR137W 1104 nt13.85□□□□□ -0.19
SHE10P53075 YOL037CYOL037C 354 nt13.85□□□□□ -0.19
SHE10P53075 PHO4YFR034C 939 nt13.84□□□□□ -0.19
SHE10P53075 TRM9YML014W 840 nt13.79□□□□□ -0.2
SHE10P53075 FUN26YAL022C 1554 nt13.73□□□□□ -0.21
SHE10P53075 ALF1YNL148C 765 nt13.59□□□□□ -0.23
SHE10P53075 CCT6YDR188W 1641 nt13.57□□□□□ -0.24
SHE10P53075 SUF2tP(AGG)C 72 nt13.52□□□□□ -0.25
SHE10P53075 SUF10tP(AGG)N 72 nt13.52□□□□□ -0.25
SHE10P53075 SSA4YER103W 1929 nt13.52□□□□□ -0.25
SHE10P53075 tM(CAU)CtM(CAU)C 72 nt13.51□□□□□ -0.25
SHE10P53075 IMT4tM(CAU)E 72 nt13.51□□□□□ -0.25
SHE10P53075 IMT3tM(CAU)J3 72 nt13.51□□□□□ -0.25
SHE10P53075 IMT1tM(CAU)O1 72 nt13.51□□□□□ -0.25
SHE10P53075 IMT2tM(CAU)P 72 nt13.51□□□□□ -0.25
SHE10P53075 YPS1YLR120C 1710 nt13.5□□□□□ -0.25
SHE10P53075 SPT5YML010W 3192 nt13.5□□□□□ -0.25
SHE10P53075 YLR281CYLR281C 468 nt13.49□□□□□ -0.25
SHE10P53075 WHI5YOR083W 888 nt13.46□□□□□ -0.25
SHE10P53075 PUS2YGL063W 1113 nt13.45□□□□□ -0.26
SHE10P53075 YDR095CYDR095C 411 nt13.44□□□□□ -0.26
SHE10P53075 YHR165W-AYHR165W-A 312 nt13.43□□□□□ -0.26
Retrieved 100 of 7,029 protein–RNA pairs in 750.2 ms