Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.076e-15■■■■■ 44.9
XRN2Q9H0D6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.49■■□□□ 1.036e-15■■■■■ 44.9
XRN2Q9H0D6 KLHDC4-208ENST00000562261 1065 ntTSL 318.28■□□□□ 0.526e-15■■■■■ 44.9
XRN2Q9H0D6 KLHDC4-212ENST00000564396 563 ntTSL 517.65■□□□□ 0.426e-15■■■■■ 44.9
XRN2Q9H0D6 KLHDC4-226ENST00000569747 560 ntTSL 416.51■□□□□ 0.236e-15■■■■■ 44.9
XRN2Q9H0D6 KLHDC4-224ENST00000568502 546 ntTSL 415.72■□□□□ 0.116e-15■■■■■ 44.9
XRN2Q9H0D6 KLHDC4-216ENST00000566561 564 ntTSL 414.76□□□□□ -0.056e-15■■■■■ 44.9
XRN2Q9H0D6 KLHDC4-211ENST00000563845 528 ntTSL 414.76□□□□□ -0.056e-15■■■■■ 44.9
XRN2Q9H0D6 KLHDC4-218ENST00000567298 4572 ntTSL 514.21□□□□□ -0.136e-15■■■■■ 44.9
XRN2Q9H0D6 KLHDC4-206ENST00000561825 562 ntTSL 513.43□□□□□ -0.266e-15■■■■■ 44.9
XRN2Q9H0D6 KLHDC4-213ENST00000564484 562 ntTSL 512.32□□□□□ -0.446e-15■■■■■ 44.9
XRN2Q9H0D6 KLHDC4-220ENST00000568338 584 ntTSL 410.12□□□□□ -0.796e-15■■■■■ 44.9
XRN2Q9H0D6 LARP4B-202ENST00000406525 681 ntTSL 531.97■■■□□ 2.717e-11■■■■■ 44.8
XRN2Q9H0D6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.247e-11■■■■■ 44.8
XRN2Q9H0D6 MVD-207ENST00000563463 543 ntTSL 319.73■□□□□ 0.757e-7■■■■■ 44.7
XRN2Q9H0D6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.85e-11■■■■■ 44.6
XRN2Q9H0D6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.065e-11■■■■■ 44.6
XRN2Q9H0D6 HNRNPA3-202ENST00000411529 5688 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.825e-11■■■■■ 44.6
XRN2Q9H0D6 BBC3-205ENST00000598636 900 ntTSL 227.91■■■□□ 2.068e-7■■■■■ 44.5
XRN2Q9H0D6 DCUN1D4-215ENST00000509068 805 ntTSL 326.46■■□□□ 1.835e-8■■■■■ 44.5
XRN2Q9H0D6 DCUN1D4-209ENST00000505403 645 ntTSL 425.85■■□□□ 1.735e-8■■■■■ 44.5
XRN2Q9H0D6 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.64■□□□□ 0.095e-8■■■■■ 44.5
XRN2Q9H0D6 EP400NL-204ENST00000407361 945 ntTSL 325.49■■□□□ 1.672e-11■■■■■ 44.2
XRN2Q9H0D6 EP400NL-203ENST00000392352 2172 ntTSL 224.43■■□□□ 1.52e-11■■■■■ 44.2
XRN2Q9H0D6 EP400NL-205ENST00000443539 1756 ntTSL 224.24■■□□□ 1.472e-11■■■■■ 44.2
XRN2Q9H0D6 EP400NL-202ENST00000389560 1726 ntTSL 1 (best)23.94■■□□□ 1.422e-11■■■■■ 44.2
XRN2Q9H0D6 EP400NL-211ENST00000539205 583 ntTSL 323.78■■□□□ 1.42e-11■■■■■ 44.2
XRN2Q9H0D6 EP400NL-207ENST00000454179 781 ntTSL 223.6■■□□□ 1.372e-11■■■■■ 44.2
XRN2Q9H0D6 EP400NL-214ENST00000641289 2402 ntBASIC21.77■■□□□ 1.082e-11■■■■■ 44.2
XRN2Q9H0D6 EP400NL-209ENST00000488030 1366 ntTSL 220.94■□□□□ 0.942e-11■■■■■ 44.2
XRN2Q9H0D6 EP400NL-201ENST00000332441 2741 ntTSL 218.65■□□□□ 0.582e-11■■■■■ 44.2
XRN2Q9H0D6 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.07□□□□□ -0.322e-11■■■■■ 44.2
XRN2Q9H0D6 FAM60A-208ENST00000543615 669 ntTSL 521.63■■□□□ 1.058e-9■■■■■ 44.2
XRN2Q9H0D6 FAM60A-204ENST00000536836 1734 ntTSL 216.36■□□□□ 0.218e-9■■■■■ 44.2
XRN2Q9H0D6 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC16.18■□□□□ 0.188e-9■■■■■ 44.2
XRN2Q9H0D6 FAM60A-206ENST00000539409 2532 ntTSL 1 (best) BASIC12.66□□□□□ -0.388e-9■■■■■ 44.2
XRN2Q9H0D6 FAM60A-201ENST00000337682 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.538e-9■■■■■ 44.2
XRN2Q9H0D6 FAM60A-205ENST00000539004 459 ntTSL 54.8□□□□□ -1.648e-9■■■■■ 44.2
XRN2Q9H0D6 TFDP1-206ENST00000475254 804 ntTSL 322.07■■□□□ 1.124e-7■■■■■ 44.2
XRN2Q9H0D6 TFDP1-204ENST00000464794 447 ntTSL 1 (best)21.94■■□□□ 1.14e-7■■■■■ 44.2
XRN2Q9H0D6 BANP-214ENST00000466847 772 ntTSL 220.03■□□□□ 0.88e-8■■■■■ 44.2
XRN2Q9H0D6 RPL38-205ENST00000530646 2450 ntTSL 1 (best)16.94■□□□□ 0.33e-13■■■■■ 44.2
XRN2Q9H0D6 TFDP1-205ENST00000465174 955 ntTSL 316.41■□□□□ 0.224e-7■■■■■ 44.2
XRN2Q9H0D6 BANP-218ENST00000481948 1730 ntTSL 1 (best)16.09■□□□□ 0.178e-8■■■■■ 44.2
XRN2Q9H0D6 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.043e-13■■■■■ 44.2
XRN2Q9H0D6 RPL38-203ENST00000528433 169 ntTSL 515.03■□□□□ -03e-13■■■■■ 44.2
XRN2Q9H0D6 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.084e-7■■■■■ 44.2
XRN2Q9H0D6 RPL38-206ENST00000533498 532 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.133e-13■■■■■ 44.2
XRN2Q9H0D6 RPL38-204ENST00000529123 576 ntTSL 213.13□□□□□ -0.313e-13■■■■■ 44.2
XRN2Q9H0D6 RPL38-207ENST00000534490 429 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.453e-13■■■■■ 44.2
XRN2Q9H0D6 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.05□□□□□ -1.763e-13■■■■■ 44.2
XRN2Q9H0D6 DDIT4-202ENST00000471240 521 ntTSL 225.44■■□□□ 1.664e-9■■■■■ 44.1
XRN2Q9H0D6 RPH3AL-216ENST00000575130 579 ntTSL 420.45■□□□□ 0.863e-6■■■■■ 44.1
XRN2Q9H0D6 PCK1-203ENST00000470051 409 ntTSL 218.58■□□□□ 0.562e-8■■■■■ 44
XRN2Q9H0D6 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.07□□□□□ -1.443e-7■■■■■ 43.9
XRN2Q9H0D6 PER1-203ENST00000577253 589 ntTSL 425.63■■□□□ 1.696e-11■■■■■ 43.8
XRN2Q9H0D6 SDCBP-209ENST00000522243 556 ntTSL 524.87■■□□□ 1.578e-21■■■■■ 43.8
XRN2Q9H0D6 PER1-208ENST00000579065 1262 ntTSL 519.41■□□□□ 0.76e-11■■■■■ 43.8
XRN2Q9H0D6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.698e-21■■■■■ 43.8
XRN2Q9H0D6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.598e-21■■■■■ 43.8
XRN2Q9H0D6 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.466e-11■■■■■ 43.8
XRN2Q9H0D6 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.426e-11■■■■■ 43.8
XRN2Q9H0D6 DERL3-205ENST00000464023 645 ntTSL 317.33■□□□□ 0.366e-11■■■■■ 43.8
XRN2Q9H0D6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.348e-21■■■■■ 43.8
XRN2Q9H0D6 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.176e-11■■■■■ 43.8
XRN2Q9H0D6 PER1-212ENST00000581395 3209 ntTSL 214.86□□□□□ -0.036e-11■■■■■ 43.8
XRN2Q9H0D6 PER1-217ENST00000584202 576 ntTSL 514.66□□□□□ -0.066e-11■■■■■ 43.8
XRN2Q9H0D6 DERL3-201ENST00000290730 3525 ntTSL 213.09□□□□□ -0.316e-11■■■■■ 43.8
XRN2Q9H0D6 PER1-213ENST00000581703 528 ntTSL 412.64□□□□□ -0.396e-11■■■■■ 43.8
XRN2Q9H0D6 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.6□□□□□ -0.396e-11■■■■■ 43.8
XRN2Q9H0D6 PER1-214ENST00000582719 3677 ntTSL 512.52□□□□□ -0.416e-11■■■■■ 43.8
XRN2Q9H0D6 DERL3-203ENST00000404056 3113 ntTSL 5 BASIC11.62□□□□□ -0.556e-11■■■■■ 43.8
XRN2Q9H0D6 FUBP3-204ENST00000472006 284 ntTSL 211.49□□□□□ -0.579e-12■■■■■ 43.8
XRN2Q9H0D6 SDCBP-212ENST00000523483 3589 ntTSL 2 BASIC10.3□□□□□ -0.768e-21■■■■■ 43.8
XRN2Q9H0D6 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.886e-11■■■■■ 43.8
XRN2Q9H0D6 SDCBP-206ENST00000519115 812 ntTSL 28.78□□□□□ -18e-21■■■■■ 43.8
XRN2Q9H0D6 SDCBP-210ENST00000522843 764 ntTSL 28.47□□□□□ -1.058e-21■■■■■ 43.8
XRN2Q9H0D6 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC8.25□□□□□ -1.098e-21■■■■■ 43.8
XRN2Q9H0D6 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.23□□□□□ -1.418e-21■■■■■ 43.8
XRN2Q9H0D6 RNU6-40P-201ENST00000384254 107 ntBASIC5.86□□□□□ -1.476e-11■■■■■ 43.8
XRN2Q9H0D6 MIR4713HG-201ENST00000559909 561 ntTSL 4 BASIC13.03□□□□□ -0.322e-6■■■■■ 43.7
XRN2Q9H0D6 GNAS-244ENST00000485673 715 ntTSL 532.56■■■□□ 2.83e-7■■■■■ 43.7
XRN2Q9H0D6 GNAS-235ENST00000478585 543 ntTSL 231.42■■■□□ 2.623e-7■■■■■ 43.7
XRN2Q9H0D6 GNAS-228ENST00000469431 702 ntTSL 531.42■■■□□ 2.623e-7■■■■■ 43.7
XRN2Q9H0D6 GNAS-257ENST00000604005 693 ntTSL 331.42■■■□□ 2.623e-7■■■■■ 43.7
XRN2Q9H0D6 GNAS-226ENST00000467321 733 ntTSL 522.54■■□□□ 1.23e-7■■■■■ 43.7
XRN2Q9H0D6 GNAS-230ENST00000472183 911 ntTSL 321.78■■□□□ 1.083e-7■■■■■ 43.7
XRN2Q9H0D6 GNAS-223ENST00000464788 583 ntTSL 218.13■□□□□ 0.493e-7■■■■■ 43.7
XRN2Q9H0D6 GNAS-241ENST00000482112 704 ntTSL 317.69■□□□□ 0.423e-7■■■■■ 43.7
XRN2Q9H0D6 GNAS-221ENST00000462499 492 ntTSL 217.69■□□□□ 0.423e-7■■■■■ 43.7
XRN2Q9H0D6 GNAS-249ENST00000490374 675 ntTSL 317.1■□□□□ 0.333e-7■■■■■ 43.7
XRN2Q9H0D6 GNAS-206ENST00000349036 581 ntTSL 516.19■□□□□ 0.183e-7■■■■■ 43.7
XRN2Q9H0D6 GNAS-216ENST00000419558 729 ntTSL 312.8□□□□□ -0.363e-7■■■■■ 43.7
XRN2Q9H0D6 GNAS-218ENST00000450130 595 ntTSL 511.96□□□□□ -0.493e-7■■■■■ 43.7
XRN2Q9H0D6 GNAS-227ENST00000468895 583 ntTSL 310.53□□□□□ -0.723e-7■■■■■ 43.7
XRN2Q9H0D6 GNAS-225ENST00000467227 543 ntTSL 38.52□□□□□ -1.053e-7■■■■■ 43.7
XRN2Q9H0D6 SIK3-211ENST00000485363 764 ntTSL 1 (best)19.06■□□□□ 0.641e-6■■■■■ 43.7
XRN2Q9H0D6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.121e-6■■■■■ 43.7
XRN2Q9H0D6 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.021e-6■■■■■ 43.7
XRN2Q9H0D6 SIK3-204ENST00000445177 6331 ntAPPRIS ALT2 TSL 513.3□□□□□ -0.281e-6■■■■■ 43.7
Retrieved 100 of 21,068 protein–RNA pairs in 358.1 ms