RNA–Protein interactions for RNA: ENST00000337682.8

FAM60A-201, Transcript of Protein FAM60A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM60A, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-201ENST00000337682 NISCHQ9Y2I1 1504 aa24.85■■□□□ 1.57
FAM60A-201ENST00000337682 CCDC180Q9P1Z9 1646 aa21.88■■□□□ 1.09
FAM60A-201ENST00000337682 ABCC9O60706 1549 aa20.87■□□□□ 0.93
FAM60A-201ENST00000337682 ZCCHC6Q5VYS8 1495 aaKnown RBP20.83■□□□□ 0.93
FAM60A-201ENST00000337682 DCAF1Q9Y4B6 1507 aa20.58■□□□□ 0.88
FAM60A-201ENST00000337682 DCAF8L2P0C7V8 631 aa20.5■□□□□ 0.87
FAM60A-201ENST00000337682 MYO15BQ96JP2 1530 aa20.46■□□□□ 0.87
FAM60A-201ENST00000337682 NACADO15069 1562 aa20.41■□□□□ 0.86
FAM60A-201ENST00000337682 RB1CC1Q8TDY2 1594 aa20.31■□□□□ 0.84
FAM60A-201ENST00000337682 SCRIBQ14160 1630 aa20.02■□□□□ 0.8
FAM60A-201ENST00000337682 SHROOM4Q9ULL8 1493 aa19.97■□□□□ 0.79
FAM60A-201ENST00000337682 UNC13AQ9UPW8 1703 aa19.93■□□□□ 0.78
FAM60A-201ENST00000337682 BICRAQ9NZM4 1560 aa19.71■□□□□ 0.75
FAM60A-201ENST00000337682 PABPN1Q86U42 306 aaKnown RBP eCLIP19.58■□□□□ 0.72
FAM60A-201ENST00000337682 CECR2Q9BXF3 1484 aa19.31■□□□□ 0.68
FAM60A-201ENST00000337682 BAZ1AQ9NRL2 1556 aaPredicted RBP19.22■□□□□ 0.67
FAM60A-201ENST00000337682 SMARCA4P51532 1647 aa19.19■□□□□ 0.66
FAM60A-201ENST00000337682 MROH2BQ7Z745 1585 aa19.18■□□□□ 0.66
FAM60A-201ENST00000337682 RSF1Q96T23 1441 aaPredicted RBP19.13■□□□□ 0.65
FAM60A-201ENST00000337682 EIF4G1Q04637 1599 aaKnown RBP19.13■□□□□ 0.65
FAM60A-201ENST00000337682 SUPT5HO00267 1087 aaKnown RBP19.04■□□□□ 0.64
FAM60A-201ENST00000337682 WIZO95785 1651 aa19.02■□□□□ 0.64
FAM60A-201ENST00000337682 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
FAM60A-201ENST00000337682 SMARCA2P51531 1590 aa18.93■□□□□ 0.62
FAM60A-201ENST00000337682 CC2D2AQ9P2K1 1620 aa18.92■□□□□ 0.62
FAM60A-201ENST00000337682 ATAD2BQ9ULI0 1458 aa18.92■□□□□ 0.62
FAM60A-201ENST00000337682 TOP2AP11388 1531 aaKnown RBP18.83■□□□□ 0.6
FAM60A-201ENST00000337682 NCAPD3P42695 1498 aa18.82■□□□□ 0.6
FAM60A-201ENST00000337682 HMGXB3Q12766 1538 aa18.8■□□□□ 0.6
FAM60A-201ENST00000337682 BAZ1BQ9UIG0 1483 aaKnown RBP18.8■□□□□ 0.6
FAM60A-201ENST00000337682 DNAJC5BQ9UF47 199 aa18.66■□□□□ 0.58
FAM60A-201ENST00000337682 CCDC88BA6NC98 1476 aa18.6■□□□□ 0.57
FAM60A-201ENST00000337682 CFTRP13569 1480 aa18.31■□□□□ 0.52
FAM60A-201ENST00000337682 CADPSQ9ULU8 1353 aa18.29■□□□□ 0.52
FAM60A-201ENST00000337682 PRDM2Q13029 1718 aa18.28■□□□□ 0.52
FAM60A-201ENST00000337682 LAMC3Q9Y6N6 1575 aa18.26■□□□□ 0.51
FAM60A-201ENST00000337682 NESP48681 1621 aa18.24■□□□□ 0.51
FAM60A-201ENST00000337682 ABCC8Q09428 1581 aa18.11■□□□□ 0.49
FAM60A-201ENST00000337682 FANCD2Q9BXW9 1451 aa18.1■□□□□ 0.49
FAM60A-201ENST00000337682 CHIC1Q5VXU3 224 aa18.09■□□□□ 0.49
FAM60A-201ENST00000337682 PDS5BQ9NTI5 1447 aa18.08■□□□□ 0.48
FAM60A-201ENST00000337682 KIF21AQ7Z4S6 1674 aa18.07■□□□□ 0.48
FAM60A-201ENST00000337682 CEP164Q9UPV0 1460 aa18.03■□□□□ 0.48
FAM60A-201ENST00000337682 WRNQ14191 1432 aaPredicted RBP eCLIP18.02■□□□□ 0.47
FAM60A-201ENST00000337682 SYNJ1O43426 1573 aa17.99■□□□□ 0.47
FAM60A-201ENST00000337682 CUX1P39880 1505 aa17.96■□□□□ 0.47
FAM60A-201ENST00000337682 BIVM-ERCC5R4GMW8 1640 aa17.96■□□□□ 0.47
FAM60A-201ENST00000337682 TOP2BQ02880 1626 aa17.95■□□□□ 0.46
FAM60A-201ENST00000337682 TRIM41Q8WV44 630 aa17.94■□□□□ 0.46
FAM60A-201ENST00000337682 ERCC6Q03468 1493 aa17.93■□□□□ 0.46
FAM60A-201ENST00000337682 DNMBPQ6XZF7 1577 aa17.92■□□□□ 0.46
FAM60A-201ENST00000337682 URB2Q14146 1524 aaKnown RBP17.91■□□□□ 0.46
FAM60A-201ENST00000337682 MRC2Q9UBG0 1479 aa17.89■□□□□ 0.45
FAM60A-201ENST00000337682 TOPBP1Q92547 1522 aa17.88■□□□□ 0.45
FAM60A-201ENST00000337682 THOC2Q8NI27 1593 aaKnown RBP17.86■□□□□ 0.45
FAM60A-201ENST00000337682 WDR62O43379 1518 aa17.83■□□□□ 0.45
FAM60A-201ENST00000337682 FGD5Q6ZNL6 1462 aa17.8■□□□□ 0.44
FAM60A-201ENST00000337682 POLA1P09884 1462 aaPredicted RBP17.77■□□□□ 0.44
FAM60A-201ENST00000337682 RAD54L2Q9Y4B4 1467 aa17.69■□□□□ 0.42
FAM60A-201ENST00000337682 SOGA1O94964 1423 aa17.68■□□□□ 0.42
FAM60A-201ENST00000337682 WDR97A6NE52 1622 aa17.68■□□□□ 0.42
FAM60A-201ENST00000337682 CUX2O14529 1486 aa17.68■□□□□ 0.42
FAM60A-201ENST00000337682 TARBP1Q13395 1621 aaKnown RBP17.67■□□□□ 0.42
FAM60A-201ENST00000337682 ABCA10Q8WWZ4 1543 aa17.65■□□□□ 0.42
FAM60A-201ENST00000337682 RUSC2Q8N2Y8 1516 aa17.64■□□□□ 0.41
FAM60A-201ENST00000337682 IFT140Q96RY7 1462 aa17.62■□□□□ 0.41
FAM60A-201ENST00000337682 EEA1Q15075 1411 aa17.6■□□□□ 0.41
FAM60A-201ENST00000337682 KIF27Q86VH2 1401 aa17.59■□□□□ 0.41
FAM60A-201ENST00000337682 FAM9AQ8IZU1 332 aaPredicted RBP17.58■□□□□ 0.4
FAM60A-201ENST00000337682 ABCA5Q8WWZ7 1642 aa17.56■□□□□ 0.4
FAM60A-201ENST00000337682 TDRD9Q8NDG6 1382 aaKnown RBP17.52■□□□□ 0.39
FAM60A-201ENST00000337682 ZNF608Q9ULD9 1512 aaPredicted RBP17.52■□□□□ 0.39
FAM60A-201ENST00000337682 GAPVD1Q14C86 1478 aa17.5■□□□□ 0.39
FAM60A-201ENST00000337682 EIF4G3O43432 1585 aaKnown RBP17.49■□□□□ 0.39
FAM60A-201ENST00000337682 CSRNP3Q8WYN3 585 aa17.49■□□□□ 0.39
FAM60A-201ENST00000337682 PBRM1Q86U86 1689 aa17.48■□□□□ 0.39
FAM60A-201ENST00000337682 AQRO60306 1485 aaKnown RBP eCLIP17.47■□□□□ 0.392e-7■■■■■ 29.4
FAM60A-201ENST00000337682 IGF1RP08069 1367 aa17.45■□□□□ 0.38
FAM60A-201ENST00000337682 ERICH3Q5RHP9 1530 aa17.45■□□□□ 0.38
FAM60A-201ENST00000337682 KIF21BO75037 1637 aa17.43■□□□□ 0.38
FAM60A-201ENST00000337682 GRIN2BQ13224 1484 aa17.42■□□□□ 0.38
FAM60A-201ENST00000337682 CUL7Q14999 1698 aa17.41■□□□□ 0.38
FAM60A-201ENST00000337682 PRXQ9BXM0 1461 aa17.4■□□□□ 0.38
FAM60A-201ENST00000337682 CARMIL1Q5VZK9 1371 aa17.36■□□□□ 0.37
FAM60A-201ENST00000337682 LOC105371045A0A1W2PR82 267 aa17.36■□□□□ 0.37
FAM60A-201ENST00000337682 ADAMTS12P58397 1594 aa17.35■□□□□ 0.37
FAM60A-201ENST00000337682 GOLGA3Q08378 1498 aa17.35■□□□□ 0.37
FAM60A-201ENST00000337682 RAPGEF2Q9Y4G8 1499 aa17.35■□□□□ 0.37
FAM60A-201ENST00000337682 SNAPC4Q5SXM2 1469 aa17.34■□□□□ 0.37
FAM60A-201ENST00000337682 EHMT2Q96KQ7 1210 aa17.32■□□□□ 0.36
FAM60A-201ENST00000337682 MAGI1Q96QZ7 1491 aaPredicted RBP17.31■□□□□ 0.36
FAM60A-201ENST00000337682 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
FAM60A-201ENST00000337682 SYNJ2O15056 1496 aa17.24■□□□□ 0.35
FAM60A-201ENST00000337682 UBTFP17480 764 aaKnown RBP17.22■□□□□ 0.35
FAM60A-201ENST00000337682 TNIKQ9UKE5 1360 aa17.21■□□□□ 0.35
FAM60A-201ENST00000337682 GRIN2AQ12879 1464 aa17.2■□□□□ 0.34
FAM60A-201ENST00000337682 CTTNBP2Q8WZ74 1663 aa17.19■□□□□ 0.34
FAM60A-201ENST00000337682 CHD1O14646 1710 aa17.18■□□□□ 0.34
FAM60A-201ENST00000337682 CHMP7Q8WUX9 453 aaPredicted RBP17.16■□□□□ 0.34
FAM60A-201ENST00000337682 FBLN2P98095 1184 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms