RNA–Protein interactions for RNA: ENST00000472006.1

FUBP3-204, Transcript of far upstream element binding protein 3, humanhuman

TSL 2

Gene FUBP3, Length 284 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3-204ENST00000472006 NISCHQ9Y2I1 1504 aa24.01■■□□□ 1.43
FUBP3-204ENST00000472006 CCDC180Q9P1Z9 1646 aa21.47■■□□□ 1.03
FUBP3-204ENST00000472006 ABCC9O60706 1549 aa20.93■□□□□ 0.94
FUBP3-204ENST00000472006 RB1CC1Q8TDY2 1594 aa20.19■□□□□ 0.82
FUBP3-204ENST00000472006 NACADO15069 1562 aa20.16■□□□□ 0.82
FUBP3-204ENST00000472006 MYO15BQ96JP2 1530 aa20.04■□□□□ 0.8
FUBP3-204ENST00000472006 ZCCHC6Q5VYS8 1495 aaKnown RBP20■□□□□ 0.79
FUBP3-204ENST00000472006 DCAF8L2P0C7V8 631 aa19.93■□□□□ 0.78
FUBP3-204ENST00000472006 DCAF1Q9Y4B6 1507 aa19.92■□□□□ 0.78
FUBP3-204ENST00000472006 UNC13AQ9UPW8 1703 aa19.82■□□□□ 0.76
FUBP3-204ENST00000472006 BICRAQ9NZM4 1560 aa19.58■□□□□ 0.73
FUBP3-204ENST00000472006 SCRIBQ14160 1630 aa19.49■□□□□ 0.71
FUBP3-204ENST00000472006 PABPN1Q86U42 306 aaKnown RBP eCLIP19.48■□□□□ 0.71
FUBP3-204ENST00000472006 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
FUBP3-204ENST00000472006 DNAJC5BQ9UF47 199 aa19.22■□□□□ 0.67
FUBP3-204ENST00000472006 EIF4G1Q04637 1599 aaKnown RBP19.06■□□□□ 0.64
FUBP3-204ENST00000472006 CC2D2AQ9P2K1 1620 aa19■□□□□ 0.63
FUBP3-204ENST00000472006 CECR2Q9BXF3 1484 aa18.83■□□□□ 0.6
FUBP3-204ENST00000472006 SMARCA4P51532 1647 aa18.68■□□□□ 0.58
FUBP3-204ENST00000472006 BAZ1AQ9NRL2 1556 aaPredicted RBP18.64■□□□□ 0.57
FUBP3-204ENST00000472006 NCAPD3P42695 1498 aa18.56■□□□□ 0.56
FUBP3-204ENST00000472006 SMARCA2P51531 1590 aa18.55■□□□□ 0.56
FUBP3-204ENST00000472006 ATAD2BQ9ULI0 1458 aa18.55■□□□□ 0.56
FUBP3-204ENST00000472006 PEG3Q9GZU2 1588 aa18.53■□□□□ 0.56
FUBP3-204ENST00000472006 HMGXB3Q12766 1538 aa18.5■□□□□ 0.55
FUBP3-204ENST00000472006 MROH2BQ7Z745 1585 aa18.48■□□□□ 0.55
FUBP3-204ENST00000472006 BAZ1BQ9UIG0 1483 aaKnown RBP18.39■□□□□ 0.53
FUBP3-204ENST00000472006 WIZO95785 1651 aa18.32■□□□□ 0.52
FUBP3-204ENST00000472006 RSF1Q96T23 1441 aaPredicted RBP18.23■□□□□ 0.51
FUBP3-204ENST00000472006 LAMC3Q9Y6N6 1575 aa18.13■□□□□ 0.49
FUBP3-204ENST00000472006 TOP2AP11388 1531 aaKnown RBP18.12■□□□□ 0.49
FUBP3-204ENST00000472006 NESP48681 1621 aa18.1■□□□□ 0.49
FUBP3-204ENST00000472006 ERCC6Q03468 1493 aa18.04■□□□□ 0.48
FUBP3-204ENST00000472006 CADPSQ9ULU8 1353 aa17.99■□□□□ 0.47
FUBP3-204ENST00000472006 KIF21AQ7Z4S6 1674 aa17.98■□□□□ 0.47
FUBP3-204ENST00000472006 CUX2O14529 1486 aa17.95■□□□□ 0.46
FUBP3-204ENST00000472006 PDS5BQ9NTI5 1447 aa17.94■□□□□ 0.46
FUBP3-204ENST00000472006 THOC2Q8NI27 1593 aaKnown RBP17.92■□□□□ 0.46
FUBP3-204ENST00000472006 PRDM2Q13029 1718 aa17.89■□□□□ 0.46
FUBP3-204ENST00000472006 CFTRP13569 1480 aa17.89■□□□□ 0.45
FUBP3-204ENST00000472006 CCDC88BA6NC98 1476 aa17.87■□□□□ 0.45
FUBP3-204ENST00000472006 FANCD2Q9BXW9 1451 aa17.79■□□□□ 0.44
FUBP3-204ENST00000472006 CEP164Q9UPV0 1460 aa17.78■□□□□ 0.44
FUBP3-204ENST00000472006 MRC2Q9UBG0 1479 aa17.77■□□□□ 0.44
FUBP3-204ENST00000472006 WDR62O43379 1518 aa17.75■□□□□ 0.43
FUBP3-204ENST00000472006 URB2Q14146 1524 aaKnown RBP17.62■□□□□ 0.41
FUBP3-204ENST00000472006 SUPT5HO00267 1087 aaKnown RBP17.61■□□□□ 0.41
FUBP3-204ENST00000472006 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
FUBP3-204ENST00000472006 DNMBPQ6XZF7 1577 aa17.52■□□□□ 0.39
FUBP3-204ENST00000472006 TOPBP1Q92547 1522 aa17.51■□□□□ 0.39
FUBP3-204ENST00000472006 IFT140Q96RY7 1462 aa17.42■□□□□ 0.38
FUBP3-204ENST00000472006 DNAJC5Q9H3Z4 198 aa17.4■□□□□ 0.38
FUBP3-204ENST00000472006 TARBP1Q13395 1621 aaKnown RBP17.37■□□□□ 0.37
FUBP3-204ENST00000472006 CUX1P39880 1505 aa17.36■□□□□ 0.37
FUBP3-204ENST00000472006 POLA1P09884 1462 aaPredicted RBP17.35■□□□□ 0.37
FUBP3-204ENST00000472006 ZNF608Q9ULD9 1512 aaPredicted RBP17.31■□□□□ 0.36
FUBP3-204ENST00000472006 EIF4G3O43432 1585 aaKnown RBP17.31■□□□□ 0.36
FUBP3-204ENST00000472006 FGD5Q6ZNL6 1462 aa17.3■□□□□ 0.36
FUBP3-204ENST00000472006 WDR97A6NE52 1622 aa17.28■□□□□ 0.36
FUBP3-204ENST00000472006 BIVM-ERCC5R4GMW8 1640 aa17.26■□□□□ 0.35
FUBP3-204ENST00000472006 SOGA1O94964 1423 aa17.25■□□□□ 0.35
FUBP3-204ENST00000472006 RAD54L2Q9Y4B4 1467 aa17.24■□□□□ 0.35
FUBP3-204ENST00000472006 TOP2BQ02880 1626 aa17.23■□□□□ 0.35
FUBP3-204ENST00000472006 SYNJ1O43426 1573 aa17.19■□□□□ 0.34
FUBP3-204ENST00000472006 AQRO60306 1485 aaKnown RBP eCLIP17.19■□□□□ 0.349e-10■■■□□ 17.9
FUBP3-204ENST00000472006 WRNQ14191 1432 aaPredicted RBP eCLIP17.19■□□□□ 0.34
FUBP3-204ENST00000472006 ABCA10Q8WWZ4 1543 aa17.15■□□□□ 0.34
FUBP3-204ENST00000472006 PBRM1Q86U86 1689 aa17.13■□□□□ 0.33
FUBP3-204ENST00000472006 CHD1O14646 1710 aa17.13■□□□□ 0.33
FUBP3-204ENST00000472006 ABCA5Q8WWZ7 1642 aa17.13■□□□□ 0.33
FUBP3-204ENST00000472006 TDRD9Q8NDG6 1382 aaKnown RBP17.13■□□□□ 0.33
FUBP3-204ENST00000472006 OSCARQ8IYS5 282 aa17.11■□□□□ 0.33
FUBP3-204ENST00000472006 GRIN2BQ13224 1484 aa17.08■□□□□ 0.32
FUBP3-204ENST00000472006 GAPVD1Q14C86 1478 aa17.07■□□□□ 0.32
FUBP3-204ENST00000472006 MAGI1Q96QZ7 1491 aaPredicted RBP17.07■□□□□ 0.32
FUBP3-204ENST00000472006 SNAPC4Q5SXM2 1469 aa17.06■□□□□ 0.32
FUBP3-204ENST00000472006 SYNJ2O15056 1496 aa16.99■□□□□ 0.31
FUBP3-204ENST00000472006 ERICH3Q5RHP9 1530 aa16.96■□□□□ 0.31
FUBP3-204ENST00000472006 ADAMTS12P58397 1594 aa16.95■□□□□ 0.3
FUBP3-204ENST00000472006 FBLN2P98095 1184 aa16.93■□□□□ 0.3
FUBP3-204ENST00000472006 RIMBP3CA6NJZ7 1639 aa16.92■□□□□ 0.3
FUBP3-204ENST00000472006 RIMBP3BA6NNM3 1639 aa16.92■□□□□ 0.3
FUBP3-204ENST00000472006 RIMBP3Q9UFD9 1639 aa16.92■□□□□ 0.3
FUBP3-204ENST00000472006 CHMP7Q8WUX9 453 aaPredicted RBP16.92■□□□□ 0.3
FUBP3-204ENST00000472006 CLASP1Q7Z460 1538 aa16.91■□□□□ 0.3
FUBP3-204ENST00000472006 ARHGEF11O15085 1522 aa16.88■□□□□ 0.29
FUBP3-204ENST00000472006 FHAD1B1AJZ9 1412 aa16.87■□□□□ 0.29
FUBP3-204ENST00000472006 GRIN2AQ12879 1464 aa16.87■□□□□ 0.29
FUBP3-204ENST00000472006 KIF27Q86VH2 1401 aa16.84■□□□□ 0.29
FUBP3-204ENST00000472006 CUL7Q14999 1698 aa16.83■□□□□ 0.28
FUBP3-204ENST00000472006 CEP170Q5SW79 1584 aa16.81■□□□□ 0.28
FUBP3-204ENST00000472006 NUP160Q12769 1436 aa16.8■□□□□ 0.28
FUBP3-204ENST00000472006 IGF1RP08069 1367 aa16.77■□□□□ 0.27
FUBP3-204ENST00000472006 SHROOM2Q13796 1616 aa16.74■□□□□ 0.27
FUBP3-204ENST00000472006 ARAP1Q96P48 1450 aa16.73■□□□□ 0.27
FUBP3-204ENST00000472006 TRIM41Q8WV44 630 aa16.73■□□□□ 0.27
FUBP3-204ENST00000472006 RUSC2Q8N2Y8 1516 aa16.7■□□□□ 0.26
FUBP3-204ENST00000472006 CARMIL1Q5VZK9 1371 aa16.66■□□□□ 0.26
FUBP3-204ENST00000472006 CYB5RLQ6IPT4 315 aa16.64■□□□□ 0.25
FUBP3-204ENST00000472006 ERCC6L2Q5T890 1561 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms