RNA–Protein interactions for RNA: ENST00000533498.1

RPL38-206, Transcript of ribosomal protein L38, humanhuman

APPRIS P2 TSL 2 BASIC

Gene RPL38, Length 532 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38-206ENST00000533498 NISCHQ9Y2I1 1504 aa29.42■■■□□ 2.3
RPL38-206ENST00000533498 CCDC180Q9P1Z9 1646 aa26.54■■□□□ 1.84
RPL38-206ENST00000533498 ABCC9O60706 1549 aa26.33■■□□□ 1.81
RPL38-206ENST00000533498 RB1CC1Q8TDY2 1594 aa25.2■■□□□ 1.62
RPL38-206ENST00000533498 NACADO15069 1562 aa25.04■■□□□ 1.6
RPL38-206ENST00000533498 MYO15BQ96JP2 1530 aa24.75■■□□□ 1.55
RPL38-206ENST00000533498 UNC13AQ9UPW8 1703 aa24.66■■□□□ 1.54
RPL38-206ENST00000533498 DCAF8L2P0C7V8 631 aa24.66■■□□□ 1.54
RPL38-206ENST00000533498 DNAJC5BQ9UF47 199 aa24.63■■□□□ 1.53
RPL38-206ENST00000533498 PABPN1Q86U42 306 aaKnown RBP eCLIP24.43■■□□□ 1.5
RPL38-206ENST00000533498 BICRAQ9NZM4 1560 aa24.41■■□□□ 1.5
RPL38-206ENST00000533498 DCAF1Q9Y4B6 1507 aa24.4■■□□□ 1.5
RPL38-206ENST00000533498 ZCCHC6Q5VYS8 1495 aaKnown RBP24.38■■□□□ 1.49
RPL38-206ENST00000533498 SHROOM4Q9ULL8 1493 aa24.23■■□□□ 1.47
RPL38-206ENST00000533498 SCRIBQ14160 1630 aa24.02■■□□□ 1.44
RPL38-206ENST00000533498 CC2D2AQ9P2K1 1620 aa23.87■■□□□ 1.41
RPL38-206ENST00000533498 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
RPL38-206ENST00000533498 CECR2Q9BXF3 1484 aa23.76■■□□□ 1.39
RPL38-206ENST00000533498 NCAPD3P42695 1498 aa23.07■■□□□ 1.28
RPL38-206ENST00000533498 SMARCA2P51531 1590 aa22.97■■□□□ 1.27
RPL38-206ENST00000533498 SMARCA4P51532 1647 aa22.97■■□□□ 1.27
RPL38-206ENST00000533498 ATAD2BQ9ULI0 1458 aa22.96■■□□□ 1.27
RPL38-206ENST00000533498 HMGXB3Q12766 1538 aa22.94■■□□□ 1.26
RPL38-206ENST00000533498 BAZ1AQ9NRL2 1556 aaPredicted RBP22.89■■□□□ 1.25
RPL38-206ENST00000533498 CUX2O14529 1486 aa22.83■■□□□ 1.25
RPL38-206ENST00000533498 PEG3Q9GZU2 1588 aa22.81■■□□□ 1.24
RPL38-206ENST00000533498 ERCC6Q03468 1493 aa22.79■■□□□ 1.24
RPL38-206ENST00000533498 BAZ1BQ9UIG0 1483 aaKnown RBP22.75■■□□□ 1.23
RPL38-206ENST00000533498 DNAJC5Q9H3Z4 198 aa22.73■■□□□ 1.23
RPL38-206ENST00000533498 MROH2BQ7Z745 1585 aa22.61■■□□□ 1.21
RPL38-206ENST00000533498 LAMC3Q9Y6N6 1575 aa22.6■■□□□ 1.21
RPL38-206ENST00000533498 NESP48681 1621 aa22.6■■□□□ 1.21
RPL38-206ENST00000533498 THOC2Q8NI27 1593 aaKnown RBP22.49■■□□□ 1.19
RPL38-206ENST00000533498 KIF21AQ7Z4S6 1674 aa22.42■■□□□ 1.18
RPL38-206ENST00000533498 PDS5BQ9NTI5 1447 aa22.42■■□□□ 1.18
RPL38-206ENST00000533498 WIZO95785 1651 aa22.36■■□□□ 1.17
RPL38-206ENST00000533498 CADPSQ9ULU8 1353 aa22.33■■□□□ 1.17
RPL38-206ENST00000533498 MRC2Q9UBG0 1479 aa22.21■■□□□ 1.15
RPL38-206ENST00000533498 WDR62O43379 1518 aa22.19■■□□□ 1.14
RPL38-206ENST00000533498 RSF1Q96T23 1441 aaPredicted RBP22.14■■□□□ 1.13
RPL38-206ENST00000533498 CEP164Q9UPV0 1460 aa22.13■■□□□ 1.13
RPL38-206ENST00000533498 TOP2AP11388 1531 aaKnown RBP22.12■■□□□ 1.13
RPL38-206ENST00000533498 CFTRP13569 1480 aa22.09■■□□□ 1.13
RPL38-206ENST00000533498 FANCD2Q9BXW9 1451 aa22.07■■□□□ 1.12
RPL38-206ENST00000533498 PRDM2Q13029 1718 aa22.03■■□□□ 1.12
RPL38-206ENST00000533498 URB2Q14146 1524 aaKnown RBP21.87■■□□□ 1.09
RPL38-206ENST00000533498 CCDC88BA6NC98 1476 aa21.81■■□□□ 1.08
RPL38-206ENST00000533498 ABCC8Q09428 1581 aa21.71■■□□□ 1.07
RPL38-206ENST00000533498 OSCARQ8IYS5 282 aa21.7■■□□□ 1.06
RPL38-206ENST00000533498 IFT140Q96RY7 1462 aa21.7■■□□□ 1.06
RPL38-206ENST00000533498 TOPBP1Q92547 1522 aa21.66■■□□□ 1.06
RPL38-206ENST00000533498 DNMBPQ6XZF7 1577 aa21.62■■□□□ 1.05
RPL38-206ENST00000533498 TRIM41Q8WV44 630 aa21.62■■□□□ 1.05
RPL38-206ENST00000533498 ZNF608Q9ULD9 1512 aaPredicted RBP21.57■■□□□ 1.04
RPL38-206ENST00000533498 EIF4G3O43432 1585 aaKnown RBP21.54■■□□□ 1.04
RPL38-206ENST00000533498 TARBP1Q13395 1621 aaKnown RBP21.51■■□□□ 1.03
RPL38-206ENST00000533498 RIMBP3CA6NJZ7 1639 aa21.46■■□□□ 1.03
RPL38-206ENST00000533498 RIMBP3BA6NNM3 1639 aa21.46■■□□□ 1.03
RPL38-206ENST00000533498 RIMBP3Q9UFD9 1639 aa21.46■■□□□ 1.03
RPL38-206ENST00000533498 POLA1P09884 1462 aaPredicted RBP21.43■■□□□ 1.02
RPL38-206ENST00000533498 CHD1O14646 1710 aa21.41■■□□□ 1.02
RPL38-206ENST00000533498 WDR97A6NE52 1622 aa21.4■■□□□ 1.02
RPL38-206ENST00000533498 ARHGEF11O15085 1522 aa21.37■■□□□ 1.01
RPL38-206ENST00000533498 AQRO60306 1485 aaKnown RBP eCLIP21.37■■□□□ 1.012e-7■■■■■ 32.3
RPL38-206ENST00000533498 SOGA1O94964 1423 aa21.31■■□□□ 1
RPL38-206ENST00000533498 FGD5Q6ZNL6 1462 aa21.28■■□□□ 1
RPL38-206ENST00000533498 RAD54L2Q9Y4B4 1467 aa21.28■■□□□ 1
RPL38-206ENST00000533498 CUX1P39880 1505 aa21.26■□□□□ 0.99
RPL38-206ENST00000533498 MAGI1Q96QZ7 1491 aaPredicted RBP21.22■□□□□ 0.99
RPL38-206ENST00000533498 TDRD9Q8NDG6 1382 aaKnown RBP21.22■□□□□ 0.99
RPL38-206ENST00000533498 FBLN2P98095 1184 aa21.19■□□□□ 0.98
RPL38-206ENST00000533498 SNAPC4Q5SXM2 1469 aa21.19■□□□□ 0.98
RPL38-206ENST00000533498 GRIN2BQ13224 1484 aa21.17■□□□□ 0.98
RPL38-206ENST00000533498 SYNJ1O43426 1573 aa21.16■□□□□ 0.98
RPL38-206ENST00000533498 PBRM1Q86U86 1689 aa21.15■□□□□ 0.98
RPL38-206ENST00000533498 CLASP1Q7Z460 1538 aa21.14■□□□□ 0.98
RPL38-206ENST00000533498 ARAP1Q96P48 1450 aa21.13■□□□□ 0.97
RPL38-206ENST00000533498 CYB5RLQ6IPT4 315 aa21.13■□□□□ 0.97
RPL38-206ENST00000533498 SYNJ2O15056 1496 aa21.12■□□□□ 0.97
RPL38-206ENST00000533498 ABCA10Q8WWZ4 1543 aa21.09■□□□□ 0.97
RPL38-206ENST00000533498 CHMP7Q8WUX9 453 aaPredicted RBP21.09■□□□□ 0.97
RPL38-206ENST00000533498 GAPVD1Q14C86 1478 aa21.08■□□□□ 0.97
RPL38-206ENST00000533498 ABCA5Q8WWZ7 1642 aa21.08■□□□□ 0.97
RPL38-206ENST00000533498 SUPT5HO00267 1087 aaKnown RBP21.02■□□□□ 0.96
RPL38-206ENST00000533498 BIVM-ERCC5R4GMW8 1640 aa21.01■□□□□ 0.95
RPL38-206ENST00000533498 TOP2BQ02880 1626 aa20.99■□□□□ 0.95
RPL38-206ENST00000533498 WRNQ14191 1432 aaPredicted RBP eCLIP20.98■□□□□ 0.95
RPL38-206ENST00000533498 ADAMTS12P58397 1594 aa20.91■□□□□ 0.94
RPL38-206ENST00000533498 GRIN2AQ12879 1464 aa20.9■□□□□ 0.94
RPL38-206ENST00000533498 TRHP20396 242 aaPredicted RBP20.89■□□□□ 0.93
RPL38-206ENST00000533498 ERICH3Q5RHP9 1530 aa20.86■□□□□ 0.93
RPL38-206ENST00000533498 FHAD1B1AJZ9 1412 aa20.83■□□□□ 0.93
RPL38-206ENST00000533498 NUP160Q12769 1436 aa20.83■□□□□ 0.93
RPL38-206ENST00000533498 CEP170Q5SW79 1584 aa20.81■□□□□ 0.92
RPL38-206ENST00000533498 SHROOM2Q13796 1616 aa20.8■□□□□ 0.92
RPL38-206ENST00000533498 ERCC6L2Q5T890 1561 aa20.72■□□□□ 0.91
RPL38-206ENST00000533498 RUSC2Q8N2Y8 1516 aa20.62■□□□□ 0.89
RPL38-206ENST00000533498 CUL7Q14999 1698 aa20.59■□□□□ 0.89
RPL38-206ENST00000533498 PRG4Q92954 1404 aaPredicted RBP20.58■□□□□ 0.88
RPL38-206ENST00000533498 JPH4Q96JJ6 628 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms