RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 NISCHQ9Y2I1 1504 aa26.79■■□□□ 1.88
FAM60A-206ENST00000539409 CCDC180Q9P1Z9 1646 aa23.57■■□□□ 1.36
FAM60A-206ENST00000539409 ABCC9O60706 1549 aa22.53■■□□□ 1.2
FAM60A-206ENST00000539409 ZCCHC6Q5VYS8 1495 aaKnown RBP22.45■■□□□ 1.18
FAM60A-206ENST00000539409 DCAF1Q9Y4B6 1507 aa22.18■■□□□ 1.14
FAM60A-206ENST00000539409 DCAF8L2P0C7V8 631 aa22.1■■□□□ 1.13
FAM60A-206ENST00000539409 MYO15BQ96JP2 1530 aa22.05■■□□□ 1.12
FAM60A-206ENST00000539409 NACADO15069 1562 aa22■■□□□ 1.11
FAM60A-206ENST00000539409 RB1CC1Q8TDY2 1594 aa21.89■■□□□ 1.1
FAM60A-206ENST00000539409 SCRIBQ14160 1630 aa21.58■■□□□ 1.05
FAM60A-206ENST00000539409 SHROOM4Q9ULL8 1493 aa21.52■■□□□ 1.04
FAM60A-206ENST00000539409 UNC13AQ9UPW8 1703 aa21.47■■□□□ 1.03
FAM60A-206ENST00000539409 BICRAQ9NZM4 1560 aa21.26■□□□□ 0.99
FAM60A-206ENST00000539409 PABPN1Q86U42 306 aaKnown RBP eCLIP21.13■□□□□ 0.97
FAM60A-206ENST00000539409 CECR2Q9BXF3 1484 aa20.82■□□□□ 0.92
FAM60A-206ENST00000539409 BAZ1AQ9NRL2 1556 aaPredicted RBP20.72■□□□□ 0.91
FAM60A-206ENST00000539409 SMARCA4P51532 1647 aa20.68■□□□□ 0.9
FAM60A-206ENST00000539409 MROH2BQ7Z745 1585 aa20.67■□□□□ 0.9
FAM60A-206ENST00000539409 EIF4G1Q04637 1599 aaKnown RBP20.63■□□□□ 0.89
FAM60A-206ENST00000539409 RSF1Q96T23 1441 aaPredicted RBP20.62■□□□□ 0.89
FAM60A-206ENST00000539409 SUPT5HO00267 1087 aaKnown RBP20.5■□□□□ 0.87
FAM60A-206ENST00000539409 WIZO95785 1651 aa20.49■□□□□ 0.87
FAM60A-206ENST00000539409 PEG3Q9GZU2 1588 aa20.47■□□□□ 0.87
FAM60A-206ENST00000539409 CC2D2AQ9P2K1 1620 aa20.41■□□□□ 0.86
FAM60A-206ENST00000539409 ATAD2BQ9ULI0 1458 aa20.41■□□□□ 0.86
FAM60A-206ENST00000539409 SMARCA2P51531 1590 aa20.4■□□□□ 0.86
FAM60A-206ENST00000539409 NCAPD3P42695 1498 aa20.3■□□□□ 0.84
FAM60A-206ENST00000539409 TOP2AP11388 1531 aaKnown RBP20.29■□□□□ 0.84
FAM60A-206ENST00000539409 BAZ1BQ9UIG0 1483 aaKnown RBP20.27■□□□□ 0.84
FAM60A-206ENST00000539409 HMGXB3Q12766 1538 aa20.27■□□□□ 0.84
FAM60A-206ENST00000539409 DNAJC5BQ9UF47 199 aa20.15■□□□□ 0.82
FAM60A-206ENST00000539409 CCDC88BA6NC98 1476 aa20.04■□□□□ 0.8
FAM60A-206ENST00000539409 CFTRP13569 1480 aa19.75■□□□□ 0.75
FAM60A-206ENST00000539409 CADPSQ9ULU8 1353 aa19.73■□□□□ 0.75
FAM60A-206ENST00000539409 LAMC3Q9Y6N6 1575 aa19.68■□□□□ 0.74
FAM60A-206ENST00000539409 PRDM2Q13029 1718 aa19.68■□□□□ 0.74
FAM60A-206ENST00000539409 NESP48681 1621 aa19.67■□□□□ 0.74
FAM60A-206ENST00000539409 FANCD2Q9BXW9 1451 aa19.52■□□□□ 0.72
FAM60A-206ENST00000539409 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
FAM60A-206ENST00000539409 PDS5BQ9NTI5 1447 aa19.5■□□□□ 0.71
FAM60A-206ENST00000539409 KIF21AQ7Z4S6 1674 aa19.48■□□□□ 0.71
FAM60A-206ENST00000539409 CHIC1Q5VXU3 224 aa19.47■□□□□ 0.71
FAM60A-206ENST00000539409 CEP164Q9UPV0 1460 aa19.45■□□□□ 0.7
FAM60A-206ENST00000539409 WRNQ14191 1432 aaPredicted RBP eCLIP19.42■□□□□ 0.7
FAM60A-206ENST00000539409 SYNJ1O43426 1573 aa19.38■□□□□ 0.69
FAM60A-206ENST00000539409 CUX1P39880 1505 aa19.36■□□□□ 0.69
FAM60A-206ENST00000539409 ERCC6Q03468 1493 aa19.35■□□□□ 0.69
FAM60A-206ENST00000539409 TOP2BQ02880 1626 aa19.34■□□□□ 0.69
FAM60A-206ENST00000539409 BIVM-ERCC5R4GMW8 1640 aa19.33■□□□□ 0.69
FAM60A-206ENST00000539409 TRIM41Q8WV44 630 aa19.32■□□□□ 0.68
FAM60A-206ENST00000539409 URB2Q14146 1524 aaKnown RBP19.31■□□□□ 0.68
FAM60A-206ENST00000539409 DNMBPQ6XZF7 1577 aa19.31■□□□□ 0.68
FAM60A-206ENST00000539409 MRC2Q9UBG0 1479 aa19.3■□□□□ 0.68
FAM60A-206ENST00000539409 TOPBP1Q92547 1522 aa19.28■□□□□ 0.68
FAM60A-206ENST00000539409 THOC2Q8NI27 1593 aaKnown RBP19.27■□□□□ 0.67
FAM60A-206ENST00000539409 WDR62O43379 1518 aa19.23■□□□□ 0.67
FAM60A-206ENST00000539409 FGD5Q6ZNL6 1462 aa19.19■□□□□ 0.66
FAM60A-206ENST00000539409 POLA1P09884 1462 aaPredicted RBP19.16■□□□□ 0.66
FAM60A-206ENST00000539409 CUX2O14529 1486 aa19.07■□□□□ 0.64
FAM60A-206ENST00000539409 RAD54L2Q9Y4B4 1467 aa19.07■□□□□ 0.64
FAM60A-206ENST00000539409 SOGA1O94964 1423 aa19.06■□□□□ 0.64
FAM60A-206ENST00000539409 TARBP1Q13395 1621 aaKnown RBP19.04■□□□□ 0.64
FAM60A-206ENST00000539409 WDR97A6NE52 1622 aa19.04■□□□□ 0.64
FAM60A-206ENST00000539409 ABCA10Q8WWZ4 1543 aa19.03■□□□□ 0.64
FAM60A-206ENST00000539409 RUSC2Q8N2Y8 1516 aa19■□□□□ 0.63
FAM60A-206ENST00000539409 IFT140Q96RY7 1462 aa19■□□□□ 0.63
FAM60A-206ENST00000539409 EEA1Q15075 1411 aa18.95■□□□□ 0.62
FAM60A-206ENST00000539409 KIF27Q86VH2 1401 aa18.95■□□□□ 0.62
FAM60A-206ENST00000539409 ABCA5Q8WWZ7 1642 aa18.93■□□□□ 0.62
FAM60A-206ENST00000539409 FAM9AQ8IZU1 332 aaPredicted RBP18.93■□□□□ 0.62
FAM60A-206ENST00000539409 ZNF608Q9ULD9 1512 aaPredicted RBP18.9■□□□□ 0.62
FAM60A-206ENST00000539409 TDRD9Q8NDG6 1382 aaKnown RBP18.9■□□□□ 0.62
FAM60A-206ENST00000539409 EIF4G3O43432 1585 aaKnown RBP18.86■□□□□ 0.61
FAM60A-206ENST00000539409 GAPVD1Q14C86 1478 aa18.86■□□□□ 0.61
FAM60A-206ENST00000539409 AQRO60306 1485 aaKnown RBP eCLIP18.85■□□□□ 0.612e-7■■■■■ 29.4
FAM60A-206ENST00000539409 CSRNP3Q8WYN3 585 aa18.83■□□□□ 0.61
FAM60A-206ENST00000539409 PBRM1Q86U86 1689 aa18.82■□□□□ 0.6
FAM60A-206ENST00000539409 IGF1RP08069 1367 aa18.81■□□□□ 0.6
FAM60A-206ENST00000539409 ERICH3Q5RHP9 1530 aa18.81■□□□□ 0.6
FAM60A-206ENST00000539409 GRIN2BQ13224 1484 aa18.78■□□□□ 0.6
FAM60A-206ENST00000539409 KIF21BO75037 1637 aa18.76■□□□□ 0.59
FAM60A-206ENST00000539409 PRXQ9BXM0 1461 aa18.76■□□□□ 0.59
FAM60A-206ENST00000539409 CUL7Q14999 1698 aa18.75■□□□□ 0.59
FAM60A-206ENST00000539409 CARMIL1Q5VZK9 1371 aa18.71■□□□□ 0.59
FAM60A-206ENST00000539409 ADAMTS12P58397 1594 aa18.7■□□□□ 0.58
FAM60A-206ENST00000539409 SNAPC4Q5SXM2 1469 aa18.69■□□□□ 0.58
FAM60A-206ENST00000539409 RAPGEF2Q9Y4G8 1499 aa18.69■□□□□ 0.58
FAM60A-206ENST00000539409 LOC105371045A0A1W2PR82 267 aa18.68■□□□□ 0.58
FAM60A-206ENST00000539409 GOLGA3Q08378 1498 aa18.68■□□□□ 0.58
FAM60A-206ENST00000539409 MAGI1Q96QZ7 1491 aaPredicted RBP18.67■□□□□ 0.58
FAM60A-206ENST00000539409 FHAD1B1AJZ9 1412 aa18.65■□□□□ 0.58
FAM60A-206ENST00000539409 AEBP2Q6ZN18 517 aaPredicted RBP18.65■□□□□ 0.58
FAM60A-206ENST00000539409 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
FAM60A-206ENST00000539409 SYNJ2O15056 1496 aa18.59■□□□□ 0.57
FAM60A-206ENST00000539409 GRIN2AQ12879 1464 aa18.55■□□□□ 0.56
FAM60A-206ENST00000539409 UBTFP17480 764 aaKnown RBP18.54■□□□□ 0.56
FAM60A-206ENST00000539409 TNIKQ9UKE5 1360 aa18.53■□□□□ 0.56
FAM60A-206ENST00000539409 CHD1O14646 1710 aa18.52■□□□□ 0.55
FAM60A-206ENST00000539409 CHMP7Q8WUX9 453 aaPredicted RBP18.5■□□□□ 0.55
FAM60A-206ENST00000539409 CTTNBP2Q8WZ74 1663 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms