RNA–Protein interactions for RNA: ENST00000575130.5

RPH3AL-216, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 4

Gene RPH3AL, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-216ENST00000575130 NISCHQ9Y2I1 1504 aa41.85■■■■■ 4.29
RPH3AL-216ENST00000575130 ABCC9O60706 1549 aa38.12■■■■□ 3.69
RPH3AL-216ENST00000575130 CCDC180Q9P1Z9 1646 aa37.93■■■■□ 3.66
RPH3AL-216ENST00000575130 RB1CC1Q8TDY2 1594 aa36.25■■■■□ 3.39
RPH3AL-216ENST00000575130 DNAJC5BQ9UF47 199 aa35.99■■■■□ 3.35
RPH3AL-216ENST00000575130 NACADO15069 1562 aa35.88■■■■□ 3.33
RPH3AL-216ENST00000575130 UNC13AQ9UPW8 1703 aa35.46■■■■□ 3.27
RPH3AL-216ENST00000575130 DCAF8L2P0C7V8 631 aa35.31■■■■□ 3.24
RPH3AL-216ENST00000575130 PABPN1Q86U42 306 aaKnown RBP eCLIP35.3■■■■□ 3.24
RPH3AL-216ENST00000575130 MYO15BQ96JP2 1530 aa35.27■■■■□ 3.24
RPH3AL-216ENST00000575130 BICRAQ9NZM4 1560 aa35.12■■■■□ 3.21
RPH3AL-216ENST00000575130 SHROOM4Q9ULL8 1493 aa34.78■■■■□ 3.16
RPH3AL-216ENST00000575130 DCAF1Q9Y4B6 1507 aa34.63■■■■□ 3.13
RPH3AL-216ENST00000575130 ZCCHC6Q5VYS8 1495 aaKnown RBP34.61■■■■□ 3.13
RPH3AL-216ENST00000575130 CC2D2AQ9P2K1 1620 aa34.5■■■■□ 3.11
RPH3AL-216ENST00000575130 CECR2Q9BXF3 1484 aa34.44■■■■□ 3.1
RPH3AL-216ENST00000575130 SCRIBQ14160 1630 aa34.38■■■■□ 3.09
RPH3AL-216ENST00000575130 EIF4G1Q04637 1599 aaKnown RBP34.33■■■■□ 3.09
RPH3AL-216ENST00000575130 DNAJC5Q9H3Z4 198 aa33.51■■■□□ 2.95
RPH3AL-216ENST00000575130 CUX2O14529 1486 aa33.18■■■□□ 2.9
RPH3AL-216ENST00000575130 NCAPD3P42695 1498 aa33.05■■■□□ 2.88
RPH3AL-216ENST00000575130 ERCC6Q03468 1493 aa33.03■■■□□ 2.88
RPH3AL-216ENST00000575130 SMARCA2P51531 1590 aa32.86■■■□□ 2.85
RPH3AL-216ENST00000575130 HMGXB3Q12766 1538 aa32.86■■■□□ 2.85
RPH3AL-216ENST00000575130 ATAD2BQ9ULI0 1458 aa32.86■■■□□ 2.85
RPH3AL-216ENST00000575130 SMARCA4P51532 1647 aa32.79■■■□□ 2.84
RPH3AL-216ENST00000575130 NESP48681 1621 aa32.6■■■□□ 2.81
RPH3AL-216ENST00000575130 BAZ1AQ9NRL2 1556 aaPredicted RBP32.58■■■□□ 2.81
RPH3AL-216ENST00000575130 BAZ1BQ9UIG0 1483 aaKnown RBP32.57■■■□□ 2.8
RPH3AL-216ENST00000575130 THOC2Q8NI27 1593 aaKnown RBP32.51■■■□□ 2.79
RPH3AL-216ENST00000575130 PEG3Q9GZU2 1588 aa32.51■■■□□ 2.79
RPH3AL-216ENST00000575130 LAMC3Q9Y6N6 1575 aa32.47■■■□□ 2.79
RPH3AL-216ENST00000575130 KIF21AQ7Z4S6 1674 aa32.32■■■□□ 2.76
RPH3AL-216ENST00000575130 PDS5BQ9NTI5 1447 aa32.23■■■□□ 2.75
RPH3AL-216ENST00000575130 MROH2BQ7Z745 1585 aa32.19■■■□□ 2.74
RPH3AL-216ENST00000575130 MRC2Q9UBG0 1479 aa31.99■■■□□ 2.71
RPH3AL-216ENST00000575130 CADPSQ9ULU8 1353 aa31.98■■■□□ 2.71
RPH3AL-216ENST00000575130 WDR62O43379 1518 aa31.95■■■□□ 2.71
RPH3AL-216ENST00000575130 WIZO95785 1651 aa31.82■■■□□ 2.68
RPH3AL-216ENST00000575130 TRIM41Q8WV44 630 aa31.81■■■□□ 2.68
RPH3AL-216ENST00000575130 CEP164Q9UPV0 1460 aa31.78■■■□□ 2.68
RPH3AL-216ENST00000575130 FANCD2Q9BXW9 1451 aa31.66■■■□□ 2.66
RPH3AL-216ENST00000575130 CFTRP13569 1480 aa31.56■■■□□ 2.64
RPH3AL-216ENST00000575130 TOP2AP11388 1531 aaKnown RBP31.44■■■□□ 2.62
RPH3AL-216ENST00000575130 PRDM2Q13029 1718 aa31.44■■■□□ 2.62
RPH3AL-216ENST00000575130 OSCARQ8IYS5 282 aa31.44■■■□□ 2.62
RPH3AL-216ENST00000575130 URB2Q14146 1524 aaKnown RBP31.4■■■□□ 2.62
RPH3AL-216ENST00000575130 RSF1Q96T23 1441 aaPredicted RBP31.33■■■□□ 2.61
RPH3AL-216ENST00000575130 RIMBP3CA6NJZ7 1639 aa31.2■■■□□ 2.58
RPH3AL-216ENST00000575130 RIMBP3BA6NNM3 1639 aa31.2■■■□□ 2.58
RPH3AL-216ENST00000575130 RIMBP3Q9UFD9 1639 aa31.2■■■□□ 2.58
RPH3AL-216ENST00000575130 IFT140Q96RY7 1462 aa31.15■■■□□ 2.58
RPH3AL-216ENST00000575130 ZNF608Q9ULD9 1512 aaPredicted RBP31.05■■■□□ 2.56
RPH3AL-216ENST00000575130 ARHGEF11O15085 1522 aa31.03■■■□□ 2.56
RPH3AL-216ENST00000575130 TOPBP1Q92547 1522 aa31.02■■■□□ 2.56
RPH3AL-216ENST00000575130 EIF4G3O43432 1585 aaKnown RBP31■■■□□ 2.55
RPH3AL-216ENST00000575130 ABCC8Q09428 1581 aa31■■■□□ 2.55
RPH3AL-216ENST00000575130 CCDC88BA6NC98 1476 aa30.97■■■□□ 2.55
RPH3AL-216ENST00000575130 DNMBPQ6XZF7 1577 aa30.92■■■□□ 2.54
RPH3AL-216ENST00000575130 CHD1O14646 1710 aa30.88■■■□□ 2.53
RPH3AL-216ENST00000575130 TARBP1Q13395 1621 aaKnown RBP30.81■■■□□ 2.52
RPH3AL-216ENST00000575130 AQRO60306 1485 aaKnown RBP eCLIP30.69■■■□□ 2.5
RPH3AL-216ENST00000575130 CYB5RLQ6IPT4 315 aa30.68■■■□□ 2.5
RPH3AL-216ENST00000575130 ARAP1Q96P48 1450 aa30.67■■■□□ 2.5
RPH3AL-216ENST00000575130 POLA1P09884 1462 aaPredicted RBP30.66■■■□□ 2.5
RPH3AL-216ENST00000575130 WDR97A6NE52 1622 aa30.6■■■□□ 2.49
RPH3AL-216ENST00000575130 FBLN2P98095 1184 aa30.55■■■□□ 2.48
RPH3AL-216ENST00000575130 TRHP20396 242 aaPredicted RBP30.52■■■□□ 2.48
RPH3AL-216ENST00000575130 RAD54L2Q9Y4B4 1467 aa30.47■■■□□ 2.47
RPH3AL-216ENST00000575130 CLASP1Q7Z460 1538 aa30.47■■■□□ 2.47
RPH3AL-216ENST00000575130 SOGA1O94964 1423 aa30.46■■■□□ 2.47
RPH3AL-216ENST00000575130 SYNJ1O43426 1573 aa30.45■■■□□ 2.47
RPH3AL-216ENST00000575130 SNAPC4Q5SXM2 1469 aa30.44■■■□□ 2.46
RPH3AL-216ENST00000575130 MAGI1Q96QZ7 1491 aaPredicted RBP30.42■■■□□ 2.46
RPH3AL-216ENST00000575130 TDRD9Q8NDG6 1382 aaKnown RBP30.41■■■□□ 2.46
RPH3AL-216ENST00000575130 FGD5Q6ZNL6 1462 aa30.4■■■□□ 2.46
RPH3AL-216ENST00000575130 GRIN2BQ13224 1484 aa30.32■■■□□ 2.44
RPH3AL-216ENST00000575130 CHMP7Q8WUX9 453 aaPredicted RBP30.3■■■□□ 2.44
RPH3AL-216ENST00000575130 CUX1P39880 1505 aa30.29■■■□□ 2.44
RPH3AL-216ENST00000575130 SYNJ2O15056 1496 aa30.29■■■□□ 2.44
RPH3AL-216ENST00000575130 PBRM1Q86U86 1689 aa30.28■■■□□ 2.44
RPH3AL-216ENST00000575130 GAPVD1Q14C86 1478 aa30.13■■■□□ 2.41
RPH3AL-216ENST00000575130 ABCA5Q8WWZ7 1642 aa30.11■■■□□ 2.41
RPH3AL-216ENST00000575130 ABCA10Q8WWZ4 1543 aa30.06■■■□□ 2.4
RPH3AL-216ENST00000575130 AEBP2Q6ZN18 517 aaPredicted RBP30.02■■■□□ 2.4
RPH3AL-216ENST00000575130 GRIN2AQ12879 1464 aa29.93■■■□□ 2.38
RPH3AL-216ENST00000575130 ADAMTS12P58397 1594 aa29.91■■■□□ 2.38
RPH3AL-216ENST00000575130 CEP170Q5SW79 1584 aa29.86■■■□□ 2.37
RPH3AL-216ENST00000575130 ERCC6L2Q5T890 1561 aa29.85■■■□□ 2.37
RPH3AL-216ENST00000575130 NUP160Q12769 1436 aa29.84■■■□□ 2.37
RPH3AL-216ENST00000575130 SHROOM2Q13796 1616 aa29.83■■■□□ 2.37
RPH3AL-216ENST00000575130 WRNQ14191 1432 aaPredicted RBP eCLIP29.83■■■□□ 2.37
RPH3AL-216ENST00000575130 BIVM-ERCC5R4GMW8 1640 aa29.8■■■□□ 2.36
RPH3AL-216ENST00000575130 TOP2BQ02880 1626 aa29.76■■■□□ 2.35
RPH3AL-216ENST00000575130 FHAD1B1AJZ9 1412 aa29.75■■■□□ 2.35
RPH3AL-216ENST00000575130 ERICH3Q5RHP9 1530 aa29.71■■■□□ 2.35
RPH3AL-216ENST00000575130 KIF13AQ9H1H9 1805 aa29.71■■■□□ 2.35
RPH3AL-216ENST00000575130 PRG4Q92954 1404 aaPredicted RBP29.54■■■□□ 2.32
RPH3AL-216ENST00000575130 RUSC2Q8N2Y8 1516 aa29.51■■■□□ 2.32
RPH3AL-216ENST00000575130 SUPT5HO00267 1087 aaKnown RBP29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms