RNA–Protein interactions for RNA: ENST00000568502.1

KLHDC4-224, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-224ENST00000568502 NISCHQ9Y2I1 1504 aa31.98■■■□□ 2.71
KLHDC4-224ENST00000568502 ABCC9O60706 1549 aa29.61■■■□□ 2.33
KLHDC4-224ENST00000568502 CCDC180Q9P1Z9 1646 aa29.09■■■□□ 2.25
KLHDC4-224ENST00000568502 DNAJC5BQ9UF47 199 aa28.17■■■□□ 2.1
KLHDC4-224ENST00000568502 RB1CC1Q8TDY2 1594 aa27.94■■■□□ 2.06
KLHDC4-224ENST00000568502 NACADO15069 1562 aa27.56■■■□□ 2
KLHDC4-224ENST00000568502 UNC13AQ9UPW8 1703 aa27.42■■□□□ 1.98
KLHDC4-224ENST00000568502 PABPN1Q86U42 306 aaKnown RBP eCLIP27.37■■□□□ 1.97
KLHDC4-224ENST00000568502 DCAF8L2P0C7V8 631 aa27.21■■□□□ 1.95
KLHDC4-224ENST00000568502 BICRAQ9NZM4 1560 aa27.12■■□□□ 1.93
KLHDC4-224ENST00000568502 MYO15BQ96JP2 1530 aa26.92■■□□□ 1.9
KLHDC4-224ENST00000568502 CC2D2AQ9P2K1 1620 aa26.75■■□□□ 1.87
KLHDC4-224ENST00000568502 CECR2Q9BXF3 1484 aa26.72■■□□□ 1.87
KLHDC4-224ENST00000568502 SHROOM4Q9ULL8 1493 aa26.69■■□□□ 1.86
KLHDC4-224ENST00000568502 EIF4G1Q04637 1599 aaKnown RBP26.53■■□□□ 1.84
KLHDC4-224ENST00000568502 SCRIBQ14160 1630 aa26.47■■□□□ 1.83
KLHDC4-224ENST00000568502 ZCCHC6Q5VYS8 1495 aaKnown RBP26.4■■□□□ 1.82
KLHDC4-224ENST00000568502 DCAF1Q9Y4B6 1507 aa26.36■■□□□ 1.81
KLHDC4-224ENST00000568502 DNAJC5Q9H3Z4 198 aa26.33■■□□□ 1.81
KLHDC4-224ENST00000568502 CUX2O14529 1486 aa25.76■■□□□ 1.71
KLHDC4-224ENST00000568502 ERCC6Q03468 1493 aa25.64■■□□□ 1.69
KLHDC4-224ENST00000568502 NCAPD3P42695 1498 aa25.38■■□□□ 1.65
KLHDC4-224ENST00000568502 NESP48681 1621 aa25.25■■□□□ 1.63
KLHDC4-224ENST00000568502 ATAD2BQ9ULI0 1458 aa25.24■■□□□ 1.63
KLHDC4-224ENST00000568502 HMGXB3Q12766 1538 aa25.23■■□□□ 1.63
KLHDC4-224ENST00000568502 SMARCA2P51531 1590 aa25.2■■□□□ 1.62
KLHDC4-224ENST00000568502 THOC2Q8NI27 1593 aaKnown RBP25.19■■□□□ 1.62
KLHDC4-224ENST00000568502 SMARCA4P51532 1647 aa25.15■■□□□ 1.62
KLHDC4-224ENST00000568502 KIF21AQ7Z4S6 1674 aa25.03■■□□□ 1.6
KLHDC4-224ENST00000568502 BAZ1BQ9UIG0 1483 aaKnown RBP25.02■■□□□ 1.6
KLHDC4-224ENST00000568502 TRIM41Q8WV44 630 aa25.02■■□□□ 1.6
KLHDC4-224ENST00000568502 LAMC3Q9Y6N6 1575 aa25.01■■□□□ 1.59
KLHDC4-224ENST00000568502 BAZ1AQ9NRL2 1556 aaPredicted RBP24.91■■□□□ 1.58
KLHDC4-224ENST00000568502 PEG3Q9GZU2 1588 aa24.87■■□□□ 1.57
KLHDC4-224ENST00000568502 PDS5BQ9NTI5 1447 aa24.81■■□□□ 1.56
KLHDC4-224ENST00000568502 MRC2Q9UBG0 1479 aa24.69■■□□□ 1.54
KLHDC4-224ENST00000568502 WDR62O43379 1518 aa24.66■■□□□ 1.54
KLHDC4-224ENST00000568502 MROH2BQ7Z745 1585 aa24.64■■□□□ 1.54
KLHDC4-224ENST00000568502 CADPSQ9ULU8 1353 aa24.57■■□□□ 1.52
KLHDC4-224ENST00000568502 CEP164Q9UPV0 1460 aa24.48■■□□□ 1.51
KLHDC4-224ENST00000568502 WIZO95785 1651 aa24.38■■□□□ 1.49
KLHDC4-224ENST00000568502 OSCARQ8IYS5 282 aa24.38■■□□□ 1.49
KLHDC4-224ENST00000568502 FANCD2Q9BXW9 1451 aa24.37■■□□□ 1.49
KLHDC4-224ENST00000568502 RIMBP3CA6NJZ7 1639 aa24.3■■□□□ 1.48
KLHDC4-224ENST00000568502 RIMBP3BA6NNM3 1639 aa24.3■■□□□ 1.48
KLHDC4-224ENST00000568502 RIMBP3Q9UFD9 1639 aa24.3■■□□□ 1.48
KLHDC4-224ENST00000568502 URB2Q14146 1524 aaKnown RBP24.2■■□□□ 1.47
KLHDC4-224ENST00000568502 CFTRP13569 1480 aa24.19■■□□□ 1.46
KLHDC4-224ENST00000568502 PRDM2Q13029 1718 aa24.13■■□□□ 1.45
KLHDC4-224ENST00000568502 ARHGEF11O15085 1522 aa24.12■■□□□ 1.45
KLHDC4-224ENST00000568502 TOP2AP11388 1531 aaKnown RBP24.01■■□□□ 1.43
KLHDC4-224ENST00000568502 ZNF608Q9ULD9 1512 aaPredicted RBP24■■□□□ 1.43
KLHDC4-224ENST00000568502 IFT140Q96RY7 1462 aa23.97■■□□□ 1.43
KLHDC4-224ENST00000568502 EIF4G3O43432 1585 aaKnown RBP23.94■■□□□ 1.42
KLHDC4-224ENST00000568502 CHD1O14646 1710 aa23.93■■□□□ 1.42
KLHDC4-224ENST00000568502 CYB5RLQ6IPT4 315 aa23.88■■□□□ 1.41
KLHDC4-224ENST00000568502 TRHP20396 242 aaPredicted RBP23.86■■□□□ 1.41
KLHDC4-224ENST00000568502 RSF1Q96T23 1441 aaPredicted RBP23.85■■□□□ 1.41
KLHDC4-224ENST00000568502 TOPBP1Q92547 1522 aa23.84■■□□□ 1.41
KLHDC4-224ENST00000568502 ARAP1Q96P48 1450 aa23.82■■□□□ 1.4
KLHDC4-224ENST00000568502 DNMBPQ6XZF7 1577 aa23.74■■□□□ 1.39
KLHDC4-224ENST00000568502 ABCC8Q09428 1581 aa23.72■■□□□ 1.39
KLHDC4-224ENST00000568502 TARBP1Q13395 1621 aaKnown RBP23.7■■□□□ 1.39
KLHDC4-224ENST00000568502 AQRO60306 1485 aaKnown RBP eCLIP23.68■■□□□ 1.382e-8■■■□□ 18.4
KLHDC4-224ENST00000568502 CCDC88BA6NC98 1476 aa23.67■■□□□ 1.38
KLHDC4-224ENST00000568502 FBLN2P98095 1184 aa23.65■■□□□ 1.38
KLHDC4-224ENST00000568502 AEBP2Q6ZN18 517 aaPredicted RBP23.63■■□□□ 1.37
KLHDC4-224ENST00000568502 POLA1P09884 1462 aaPredicted RBP23.56■■□□□ 1.36
KLHDC4-224ENST00000568502 CLASP1Q7Z460 1538 aa23.53■■□□□ 1.36
KLHDC4-224ENST00000568502 SYNJ1O43426 1573 aa23.49■■□□□ 1.35
KLHDC4-224ENST00000568502 SNAPC4Q5SXM2 1469 aa23.48■■□□□ 1.35
KLHDC4-224ENST00000568502 RAD54L2Q9Y4B4 1467 aa23.46■■□□□ 1.35
KLHDC4-224ENST00000568502 WDR97A6NE52 1622 aa23.44■■□□□ 1.34
KLHDC4-224ENST00000568502 TDRD9Q8NDG6 1382 aaKnown RBP23.42■■□□□ 1.34
KLHDC4-224ENST00000568502 SOGA1O94964 1423 aa23.38■■□□□ 1.33
KLHDC4-224ENST00000568502 MAGI1Q96QZ7 1491 aaPredicted RBP23.37■■□□□ 1.33
KLHDC4-224ENST00000568502 CHMP7Q8WUX9 453 aaPredicted RBP23.34■■□□□ 1.33
KLHDC4-224ENST00000568502 FGD5Q6ZNL6 1462 aa23.33■■□□□ 1.33
KLHDC4-224ENST00000568502 PBRM1Q86U86 1689 aa23.31■■□□□ 1.32
KLHDC4-224ENST00000568502 SYNJ2O15056 1496 aa23.3■■□□□ 1.32
KLHDC4-224ENST00000568502 GAPVD1Q14C86 1478 aa23.3■■□□□ 1.32
KLHDC4-224ENST00000568502 GRIN2BQ13224 1484 aa23.29■■□□□ 1.32
KLHDC4-224ENST00000568502 CUX1P39880 1505 aa23.21■■□□□ 1.31
KLHDC4-224ENST00000568502 ERCC6L2Q5T890 1561 aa23.11■■□□□ 1.29
KLHDC4-224ENST00000568502 ABCA5Q8WWZ7 1642 aa23.1■■□□□ 1.29
KLHDC4-224ENST00000568502 KIF13AQ9H1H9 1805 aa23.08■■□□□ 1.29
KLHDC4-224ENST00000568502 CEP170Q5SW79 1584 aa23.03■■□□□ 1.28
KLHDC4-224ENST00000568502 GRIN2AQ12879 1464 aa23.02■■□□□ 1.28
KLHDC4-224ENST00000568502 ABCA10Q8WWZ4 1543 aa23■■□□□ 1.27
KLHDC4-224ENST00000568502 ADAMTS12P58397 1594 aa22.99■■□□□ 1.27
KLHDC4-224ENST00000568502 SHROOM2Q13796 1616 aa22.97■■□□□ 1.27
KLHDC4-224ENST00000568502 NUP160Q12769 1436 aa22.92■■□□□ 1.26
KLHDC4-224ENST00000568502 FHAD1B1AJZ9 1412 aa22.79■■□□□ 1.24
KLHDC4-224ENST00000568502 WRNQ14191 1432 aaPredicted RBP eCLIP22.77■■□□□ 1.24
KLHDC4-224ENST00000568502 DIP2BQ9P265 1576 aa22.76■■□□□ 1.23
KLHDC4-224ENST00000568502 PRG4Q92954 1404 aaPredicted RBP22.75■■□□□ 1.23
KLHDC4-224ENST00000568502 KDM6BO15054 1643 aa22.75■■□□□ 1.23
KLHDC4-224ENST00000568502 ABCC10Q5T3U5 1492 aa22.74■■□□□ 1.23
KLHDC4-224ENST00000568502 BIVM-ERCC5R4GMW8 1640 aa22.74■■□□□ 1.23
KLHDC4-224ENST00000568502 ERICH3Q5RHP9 1530 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms