RNA–Protein interactions for RNA: ENST00000529123.2

RPL38-204, Transcript of ribosomal protein L38, humanhuman

TSL 2

Gene RPL38, Length 576 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38-204ENST00000529123 NISCHQ9Y2I1 1504 aa26.97■■□□□ 1.91
RPL38-204ENST00000529123 ABCC9O60706 1549 aa24.4■■□□□ 1.5
RPL38-204ENST00000529123 CCDC180Q9P1Z9 1646 aa24.32■■□□□ 1.48
RPL38-204ENST00000529123 RB1CC1Q8TDY2 1594 aa23.19■■□□□ 1.3
RPL38-204ENST00000529123 DNAJC5BQ9UF47 199 aa23.02■■□□□ 1.28
RPL38-204ENST00000529123 NACADO15069 1562 aa23.01■■□□□ 1.27
RPL38-204ENST00000529123 DCAF8L2P0C7V8 631 aa22.76■■□□□ 1.23
RPL38-204ENST00000529123 UNC13AQ9UPW8 1703 aa22.73■■□□□ 1.23
RPL38-204ENST00000529123 PABPN1Q86U42 306 aaKnown RBP eCLIP22.67■■□□□ 1.22
RPL38-204ENST00000529123 MYO15BQ96JP2 1530 aa22.65■■□□□ 1.22
RPL38-204ENST00000529123 BICRAQ9NZM4 1560 aa22.54■■□□□ 1.2
RPL38-204ENST00000529123 ZCCHC6Q5VYS8 1495 aaKnown RBP22.33■■□□□ 1.16
RPL38-204ENST00000529123 DCAF1Q9Y4B6 1507 aa22.3■■□□□ 1.16
RPL38-204ENST00000529123 SHROOM4Q9ULL8 1493 aa22.22■■□□□ 1.15
RPL38-204ENST00000529123 SCRIBQ14160 1630 aa22.1■■□□□ 1.13
RPL38-204ENST00000529123 CC2D2AQ9P2K1 1620 aa22.07■■□□□ 1.12
RPL38-204ENST00000529123 CECR2Q9BXF3 1484 aa22.01■■□□□ 1.11
RPL38-204ENST00000529123 EIF4G1Q04637 1599 aaKnown RBP21.99■■□□□ 1.11
RPL38-204ENST00000529123 DNAJC5Q9H3Z4 198 aa21.27■■□□□ 1
RPL38-204ENST00000529123 NCAPD3P42695 1498 aa21.22■□□□□ 0.99
RPL38-204ENST00000529123 ATAD2BQ9ULI0 1458 aa21.13■□□□□ 0.97
RPL38-204ENST00000529123 CUX2O14529 1486 aa21.13■□□□□ 0.97
RPL38-204ENST00000529123 SMARCA4P51532 1647 aa21.09■□□□□ 0.97
RPL38-204ENST00000529123 ERCC6Q03468 1493 aa21.08■□□□□ 0.97
RPL38-204ENST00000529123 SMARCA2P51531 1590 aa21.08■□□□□ 0.97
RPL38-204ENST00000529123 HMGXB3Q12766 1538 aa21.07■□□□□ 0.96
RPL38-204ENST00000529123 BAZ1AQ9NRL2 1556 aaPredicted RBP20.95■□□□□ 0.94
RPL38-204ENST00000529123 NESP48681 1621 aa20.93■□□□□ 0.94
RPL38-204ENST00000529123 BAZ1BQ9UIG0 1483 aaKnown RBP20.91■□□□□ 0.94
RPL38-204ENST00000529123 PEG3Q9GZU2 1588 aa20.9■□□□□ 0.94
RPL38-204ENST00000529123 THOC2Q8NI27 1593 aaKnown RBP20.79■□□□□ 0.92
RPL38-204ENST00000529123 LAMC3Q9Y6N6 1575 aa20.79■□□□□ 0.92
RPL38-204ENST00000529123 MROH2BQ7Z745 1585 aa20.77■□□□□ 0.92
RPL38-204ENST00000529123 KIF21AQ7Z4S6 1674 aa20.7■□□□□ 0.9
RPL38-204ENST00000529123 PDS5BQ9NTI5 1447 aa20.65■□□□□ 0.9
RPL38-204ENST00000529123 CADPSQ9ULU8 1353 aa20.56■□□□□ 0.88
RPL38-204ENST00000529123 WIZO95785 1651 aa20.54■□□□□ 0.88
RPL38-204ENST00000529123 MRC2Q9UBG0 1479 aa20.48■□□□□ 0.87
RPL38-204ENST00000529123 WDR62O43379 1518 aa20.46■□□□□ 0.87
RPL38-204ENST00000529123 CEP164Q9UPV0 1460 aa20.37■□□□□ 0.85
RPL38-204ENST00000529123 FANCD2Q9BXW9 1451 aa20.32■□□□□ 0.84
RPL38-204ENST00000529123 CFTRP13569 1480 aa20.3■□□□□ 0.84
RPL38-204ENST00000529123 RSF1Q96T23 1441 aaPredicted RBP20.27■□□□□ 0.84
RPL38-204ENST00000529123 TOP2AP11388 1531 aaKnown RBP20.26■□□□□ 0.83
RPL38-204ENST00000529123 TRIM41Q8WV44 630 aa20.24■□□□□ 0.83
RPL38-204ENST00000529123 URB2Q14146 1524 aaKnown RBP20.17■□□□□ 0.82
RPL38-204ENST00000529123 PRDM2Q13029 1718 aa20.16■□□□□ 0.82
RPL38-204ENST00000529123 OSCARQ8IYS5 282 aa20.1■□□□□ 0.81
RPL38-204ENST00000529123 CCDC88BA6NC98 1476 aa20.01■□□□□ 0.79
RPL38-204ENST00000529123 IFT140Q96RY7 1462 aa19.97■□□□□ 0.79
RPL38-204ENST00000529123 ZNF608Q9ULD9 1512 aaPredicted RBP19.94■□□□□ 0.78
RPL38-204ENST00000529123 TOPBP1Q92547 1522 aa19.93■□□□□ 0.78
RPL38-204ENST00000529123 RIMBP3CA6NJZ7 1639 aa19.9■□□□□ 0.78
RPL38-204ENST00000529123 RIMBP3BA6NNM3 1639 aa19.9■□□□□ 0.78
RPL38-204ENST00000529123 RIMBP3Q9UFD9 1639 aa19.9■□□□□ 0.78
RPL38-204ENST00000529123 ABCC8Q09428 1581 aa19.89■□□□□ 0.77
RPL38-204ENST00000529123 DNMBPQ6XZF7 1577 aa19.86■□□□□ 0.77
RPL38-204ENST00000529123 EIF4G3O43432 1585 aaKnown RBP19.85■□□□□ 0.77
RPL38-204ENST00000529123 ARHGEF11O15085 1522 aa19.81■□□□□ 0.76
RPL38-204ENST00000529123 TARBP1Q13395 1621 aaKnown RBP19.79■□□□□ 0.76
RPL38-204ENST00000529123 CHD1O14646 1710 aa19.76■□□□□ 0.75
RPL38-204ENST00000529123 AQRO60306 1485 aaKnown RBP eCLIP19.73■□□□□ 0.759e-8■■■■■ 38.3
RPL38-204ENST00000529123 POLA1P09884 1462 aaPredicted RBP19.72■□□□□ 0.75
RPL38-204ENST00000529123 RAD54L2Q9Y4B4 1467 aa19.63■□□□□ 0.73
RPL38-204ENST00000529123 CYB5RLQ6IPT4 315 aa19.63■□□□□ 0.73
RPL38-204ENST00000529123 FBLN2P98095 1184 aa19.61■□□□□ 0.73
RPL38-204ENST00000529123 SOGA1O94964 1423 aa19.6■□□□□ 0.73
RPL38-204ENST00000529123 ARAP1Q96P48 1450 aa19.6■□□□□ 0.73
RPL38-204ENST00000529123 WDR97A6NE52 1622 aa19.59■□□□□ 0.73
RPL38-204ENST00000529123 TDRD9Q8NDG6 1382 aaKnown RBP19.57■□□□□ 0.72
RPL38-204ENST00000529123 FGD5Q6ZNL6 1462 aa19.57■□□□□ 0.72
RPL38-204ENST00000529123 SNAPC4Q5SXM2 1469 aa19.54■□□□□ 0.72
RPL38-204ENST00000529123 CUX1P39880 1505 aa19.53■□□□□ 0.72
RPL38-204ENST00000529123 CLASP1Q7Z460 1538 aa19.51■□□□□ 0.71
RPL38-204ENST00000529123 MAGI1Q96QZ7 1491 aaPredicted RBP19.5■□□□□ 0.71
RPL38-204ENST00000529123 SYNJ1O43426 1573 aa19.48■□□□□ 0.71
RPL38-204ENST00000529123 GRIN2BQ13224 1484 aa19.47■□□□□ 0.71
RPL38-204ENST00000529123 TRHP20396 242 aaPredicted RBP19.45■□□□□ 0.7
RPL38-204ENST00000529123 CHMP7Q8WUX9 453 aaPredicted RBP19.45■□□□□ 0.7
RPL38-204ENST00000529123 SYNJ2O15056 1496 aa19.43■□□□□ 0.7
RPL38-204ENST00000529123 PBRM1Q86U86 1689 aa19.43■□□□□ 0.7
RPL38-204ENST00000529123 GAPVD1Q14C86 1478 aa19.38■□□□□ 0.69
RPL38-204ENST00000529123 ABCA5Q8WWZ7 1642 aa19.35■□□□□ 0.69
RPL38-204ENST00000529123 ABCA10Q8WWZ4 1543 aa19.35■□□□□ 0.69
RPL38-204ENST00000529123 GRIN2AQ12879 1464 aa19.22■□□□□ 0.67
RPL38-204ENST00000529123 WRNQ14191 1432 aaPredicted RBP eCLIP19.22■□□□□ 0.67
RPL38-204ENST00000529123 SUPT5HO00267 1087 aaKnown RBP19.21■□□□□ 0.67
RPL38-204ENST00000529123 ADAMTS12P58397 1594 aa19.21■□□□□ 0.67
RPL38-204ENST00000529123 BIVM-ERCC5R4GMW8 1640 aa19.21■□□□□ 0.67
RPL38-204ENST00000529123 TOP2BQ02880 1626 aa19.19■□□□□ 0.66
RPL38-204ENST00000529123 ERCC6L2Q5T890 1561 aa19.18■□□□□ 0.66
RPL38-204ENST00000529123 NUP160Q12769 1436 aa19.17■□□□□ 0.66
RPL38-204ENST00000529123 CEP170Q5SW79 1584 aa19.17■□□□□ 0.66
RPL38-204ENST00000529123 SHROOM2Q13796 1616 aa19.13■□□□□ 0.65
RPL38-204ENST00000529123 FHAD1B1AJZ9 1412 aa19.12■□□□□ 0.65
RPL38-204ENST00000529123 ERICH3Q5RHP9 1530 aa19.11■□□□□ 0.65
RPL38-204ENST00000529123 AEBP2Q6ZN18 517 aaPredicted RBP19■□□□□ 0.63
RPL38-204ENST00000529123 KIF13AQ9H1H9 1805 aa18.98■□□□□ 0.63
RPL38-204ENST00000529123 PRG4Q92954 1404 aaPredicted RBP18.97■□□□□ 0.63
RPL38-204ENST00000529123 JPH4Q96JJ6 628 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms