RNA–Protein interactions for RNA: ENST00000577253.5

PER1-203, Transcript of period circadian regulator 1, humanhuman

TSL 4

Gene PER1, Length 589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PER1-203ENST00000577253 NISCHQ9Y2I1 1504 aa52.22■■■■■ 5.95
PER1-203ENST00000577253 ABCC9O60706 1549 aa48.03■■■■■ 5.28
PER1-203ENST00000577253 CCDC180Q9P1Z9 1646 aa47.19■■■■■ 5.15
PER1-203ENST00000577253 DNAJC5BQ9UF47 199 aa45.72■■■■■ 4.91
PER1-203ENST00000577253 RB1CC1Q8TDY2 1594 aa45.31■■■■■ 4.84
PER1-203ENST00000577253 NACADO15069 1562 aa44.77■■■■■ 4.76
PER1-203ENST00000577253 PABPN1Q86U42 306 aaKnown RBP eCLIP44.6■■■■■ 4.73
PER1-203ENST00000577253 DCAF8L2P0C7V8 631 aa44.51■■■■■ 4.72
PER1-203ENST00000577253 UNC13AQ9UPW8 1703 aa44.38■■■■■ 4.7
PER1-203ENST00000577253 BICRAQ9NZM4 1560 aa44.05■■■■■ 4.64
PER1-203ENST00000577253 MYO15BQ96JP2 1530 aa43.83■■■■■ 4.61
PER1-203ENST00000577253 CC2D2AQ9P2K1 1620 aa43.33■■■■■ 4.53
PER1-203ENST00000577253 CECR2Q9BXF3 1484 aa43.31■■■■■ 4.52
PER1-203ENST00000577253 SHROOM4Q9ULL8 1493 aa43.25■■■■■ 4.51
PER1-203ENST00000577253 ZCCHC6Q5VYS8 1495 aaKnown RBP43.11■■■■■ 4.49
PER1-203ENST00000577253 SCRIBQ14160 1630 aa43.05■■■■■ 4.48
PER1-203ENST00000577253 EIF4G1Q04637 1599 aaKnown RBP43.03■■■■■ 4.48
PER1-203ENST00000577253 DCAF1Q9Y4B6 1507 aa43.02■■■■■ 4.48
PER1-203ENST00000577253 DNAJC5Q9H3Z4 198 aa42.49■■■■■ 4.39
PER1-203ENST00000577253 CUX2O14529 1486 aa41.63■■■■■ 4.25
PER1-203ENST00000577253 ERCC6Q03468 1493 aa41.51■■■■■ 4.24
PER1-203ENST00000577253 NCAPD3P42695 1498 aa41.34■■■■■ 4.21
PER1-203ENST00000577253 ATAD2BQ9ULI0 1458 aa41.14■■■■■ 4.18
PER1-203ENST00000577253 NESP48681 1621 aa41.05■■■■■ 4.16
PER1-203ENST00000577253 HMGXB3Q12766 1538 aa40.98■■■■■ 4.15
PER1-203ENST00000577253 SMARCA2P51531 1590 aa40.96■■■■■ 4.15
PER1-203ENST00000577253 SMARCA4P51532 1647 aa40.93■■■■■ 4.14
PER1-203ENST00000577253 THOC2Q8NI27 1593 aaKnown RBP40.76■■■■■ 4.12
PER1-203ENST00000577253 BAZ1BQ9UIG0 1483 aaKnown RBP40.72■■■■■ 4.11
PER1-203ENST00000577253 BAZ1AQ9NRL2 1556 aaPredicted RBP40.58■■■■■ 4.09
PER1-203ENST00000577253 LAMC3Q9Y6N6 1575 aa40.57■■■■■ 4.08
PER1-203ENST00000577253 KIF21AQ7Z4S6 1674 aa40.52■■■■■ 4.08
PER1-203ENST00000577253 PEG3Q9GZU2 1588 aa40.48■■■■■ 4.07
PER1-203ENST00000577253 TRIM41Q8WV44 630 aa40.42■■■■■ 4.06
PER1-203ENST00000577253 PDS5BQ9NTI5 1447 aa40.33■■■■■ 4.05
PER1-203ENST00000577253 MROH2BQ7Z745 1585 aa40.27■■■■■ 4.04
PER1-203ENST00000577253 MRC2Q9UBG0 1479 aa40.07■■■■■ 4
PER1-203ENST00000577253 CADPSQ9ULU8 1353 aa40.06■■■■■ 4
PER1-203ENST00000577253 WDR62O43379 1518 aa39.99■■■■□ 3.99
PER1-203ENST00000577253 WIZO95785 1651 aa39.8■■■■□ 3.96
PER1-203ENST00000577253 CEP164Q9UPV0 1460 aa39.76■■■■□ 3.96
PER1-203ENST00000577253 FANCD2Q9BXW9 1451 aa39.65■■■■□ 3.94
PER1-203ENST00000577253 OSCARQ8IYS5 282 aa39.61■■■■□ 3.93
PER1-203ENST00000577253 CFTRP13569 1480 aa39.44■■■■□ 3.9
PER1-203ENST00000577253 URB2Q14146 1524 aaKnown RBP39.39■■■■□ 3.9
PER1-203ENST00000577253 RIMBP3CA6NJZ7 1639 aa39.25■■■■□ 3.87
PER1-203ENST00000577253 RIMBP3BA6NNM3 1639 aa39.25■■■■□ 3.87
PER1-203ENST00000577253 RIMBP3Q9UFD9 1639 aa39.25■■■■□ 3.87
PER1-203ENST00000577253 TOP2AP11388 1531 aaKnown RBP39.16■■■■□ 3.86
PER1-203ENST00000577253 RSF1Q96T23 1441 aaPredicted RBP39.12■■■■□ 3.85
PER1-203ENST00000577253 PRDM2Q13029 1718 aa39.06■■■■□ 3.84
PER1-203ENST00000577253 ZNF608Q9ULD9 1512 aaPredicted RBP39.05■■■■□ 3.84
PER1-203ENST00000577253 ARHGEF11O15085 1522 aa39.02■■■■□ 3.84
PER1-203ENST00000577253 IFT140Q96RY7 1462 aa38.97■■■■□ 3.83
PER1-203ENST00000577253 TOPBP1Q92547 1522 aa38.81■■■■□ 3.8
PER1-203ENST00000577253 EIF4G3O43432 1585 aaKnown RBP38.8■■■■□ 3.8
PER1-203ENST00000577253 CYB5RLQ6IPT4 315 aa38.79■■■■□ 3.8
PER1-203ENST00000577253 CCDC88BA6NC98 1476 aa38.74■■■■□ 3.79
PER1-203ENST00000577253 CHD1O14646 1710 aa38.69■■■■□ 3.78
PER1-203ENST00000577253 TRHP20396 242 aaPredicted RBP38.65■■■■□ 3.78
PER1-203ENST00000577253 ABCC8Q09428 1581 aa38.61■■■■□ 3.77
PER1-203ENST00000577253 DNMBPQ6XZF7 1577 aa38.6■■■■□ 3.77
PER1-203ENST00000577253 AQRO60306 1485 aaKnown RBP eCLIP38.59■■■■□ 3.77
PER1-203ENST00000577253 ARAP1Q96P48 1450 aa38.59■■■■□ 3.77
PER1-203ENST00000577253 TARBP1Q13395 1621 aaKnown RBP38.54■■■■□ 3.76
PER1-203ENST00000577253 FBLN2P98095 1184 aa38.52■■■■□ 3.76
PER1-203ENST00000577253 POLA1P09884 1462 aaPredicted RBP38.37■■■■□ 3.73
PER1-203ENST00000577253 RAD54L2Q9Y4B4 1467 aa38.28■■■■□ 3.72
PER1-203ENST00000577253 TDRD9Q8NDG6 1382 aaKnown RBP38.23■■■■□ 3.71
PER1-203ENST00000577253 SNAPC4Q5SXM2 1469 aa38.17■■■■□ 3.7
PER1-203ENST00000577253 SOGA1O94964 1423 aa38.17■■■■□ 3.7
PER1-203ENST00000577253 CLASP1Q7Z460 1538 aa38.16■■■■□ 3.7
PER1-203ENST00000577253 AEBP2Q6ZN18 517 aaPredicted RBP38.07■■■■□ 3.68
PER1-203ENST00000577253 SYNJ1O43426 1573 aa38.06■■■■□ 3.68
PER1-203ENST00000577253 CHMP7Q8WUX9 453 aaPredicted RBP38.06■■■■□ 3.68
PER1-203ENST00000577253 FGD5Q6ZNL6 1462 aa38.03■■■■□ 3.68
PER1-203ENST00000577253 WDR97A6NE52 1622 aa38.01■■■■□ 3.68
PER1-203ENST00000577253 MAGI1Q96QZ7 1491 aaPredicted RBP37.97■■■■□ 3.67
PER1-203ENST00000577253 GRIN2BQ13224 1484 aa37.91■■■■□ 3.66
PER1-203ENST00000577253 SYNJ2O15056 1496 aa37.89■■■■□ 3.66
PER1-203ENST00000577253 CUX1P39880 1505 aa37.87■■■■□ 3.65
PER1-203ENST00000577253 GAPVD1Q14C86 1478 aa37.81■■■■□ 3.64
PER1-203ENST00000577253 PBRM1Q86U86 1689 aa37.8■■■■□ 3.64
PER1-203ENST00000577253 ERCC6L2Q5T890 1561 aa37.58■■■■□ 3.61
PER1-203ENST00000577253 ABCA5Q8WWZ7 1642 aa37.56■■■■□ 3.6
PER1-203ENST00000577253 ABCA10Q8WWZ4 1543 aa37.51■■■■□ 3.59
PER1-203ENST00000577253 GRIN2AQ12879 1464 aa37.45■■■■□ 3.59
PER1-203ENST00000577253 CEP170Q5SW79 1584 aa37.41■■■■□ 3.58
PER1-203ENST00000577253 ADAMTS12P58397 1594 aa37.34■■■■□ 3.57
PER1-203ENST00000577253 NUP160Q12769 1436 aa37.32■■■■□ 3.56
PER1-203ENST00000577253 KIF13AQ9H1H9 1805 aa37.27■■■■□ 3.56
PER1-203ENST00000577253 SHROOM2Q13796 1616 aa37.27■■■■□ 3.56
PER1-203ENST00000577253 WRNQ14191 1432 aaPredicted RBP eCLIP37.2■■■■□ 3.55
PER1-203ENST00000577253 FHAD1B1AJZ9 1412 aa37.16■■■■□ 3.54
PER1-203ENST00000577253 BIVM-ERCC5R4GMW8 1640 aa37.07■■■■□ 3.52
PER1-203ENST00000577253 PRG4Q92954 1404 aaPredicted RBP37.06■■■■□ 3.52
PER1-203ENST00000577253 TOP2BQ02880 1626 aa37.04■■■■□ 3.52
PER1-203ENST00000577253 ERICH3Q5RHP9 1530 aa37.02■■■■□ 3.52
PER1-203ENST00000577253 FAM69CQ0P6D2 419 aa36.95■■■■□ 3.51
PER1-203ENST00000577253 JPH4Q96JJ6 628 aa36.94■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms