RNA–Protein interactions for RNA: ENST00000561825.1

KLHDC4-206, Transcript of kelch domain containing 4, humanhuman

TSL 5

Gene KLHDC4, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-206ENST00000561825 NISCHQ9Y2I1 1504 aa27.76■■■□□ 2.03
KLHDC4-206ENST00000561825 CCDC180Q9P1Z9 1646 aa24.75■■□□□ 1.55
KLHDC4-206ENST00000561825 ABCC9O60706 1549 aa24.51■■□□□ 1.51
KLHDC4-206ENST00000561825 RB1CC1Q8TDY2 1594 aa23.44■■□□□ 1.34
KLHDC4-206ENST00000561825 DCAF8L2P0C7V8 631 aa23.37■■□□□ 1.33
KLHDC4-206ENST00000561825 NACADO15069 1562 aa23.35■■□□□ 1.33
KLHDC4-206ENST00000561825 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
KLHDC4-206ENST00000561825 ZCCHC6Q5VYS8 1495 aaKnown RBP23.06■■□□□ 1.28
KLHDC4-206ENST00000561825 DCAF1Q9Y4B6 1507 aa23.02■■□□□ 1.28
KLHDC4-206ENST00000561825 UNC13AQ9UPW8 1703 aa22.91■■□□□ 1.26
KLHDC4-206ENST00000561825 PABPN1Q86U42 306 aaKnown RBP eCLIP22.88■■□□□ 1.25
KLHDC4-206ENST00000561825 BICRAQ9NZM4 1560 aa22.73■■□□□ 1.23
KLHDC4-206ENST00000561825 DNAJC5BQ9UF47 199 aa22.72■■□□□ 1.23
KLHDC4-206ENST00000561825 SCRIBQ14160 1630 aa22.6■■□□□ 1.21
KLHDC4-206ENST00000561825 SHROOM4Q9ULL8 1493 aa22.53■■□□□ 1.2
KLHDC4-206ENST00000561825 EIF4G1Q04637 1599 aaKnown RBP22.16■■□□□ 1.14
KLHDC4-206ENST00000561825 CC2D2AQ9P2K1 1620 aa22.13■■□□□ 1.13
KLHDC4-206ENST00000561825 CECR2Q9BXF3 1484 aa22.03■■□□□ 1.12
KLHDC4-206ENST00000561825 NCAPD3P42695 1498 aa21.6■■□□□ 1.05
KLHDC4-206ENST00000561825 SMARCA4P51532 1647 aa21.58■■□□□ 1.05
KLHDC4-206ENST00000561825 ATAD2BQ9ULI0 1458 aa21.53■■□□□ 1.04
KLHDC4-206ENST00000561825 BAZ1AQ9NRL2 1556 aaPredicted RBP21.53■■□□□ 1.04
KLHDC4-206ENST00000561825 SMARCA2P51531 1590 aa21.48■■□□□ 1.03
KLHDC4-206ENST00000561825 HMGXB3Q12766 1538 aa21.41■■□□□ 1.02
KLHDC4-206ENST00000561825 MROH2BQ7Z745 1585 aa21.4■■□□□ 1.02
KLHDC4-206ENST00000561825 PEG3Q9GZU2 1588 aa21.4■■□□□ 1.02
KLHDC4-206ENST00000561825 BAZ1BQ9UIG0 1483 aaKnown RBP21.34■■□□□ 1.01
KLHDC4-206ENST00000561825 WIZO95785 1651 aa21.16■□□□□ 0.98
KLHDC4-206ENST00000561825 NESP48681 1621 aa21.13■□□□□ 0.97
KLHDC4-206ENST00000561825 ERCC6Q03468 1493 aa21.13■□□□□ 0.97
KLHDC4-206ENST00000561825 RSF1Q96T23 1441 aaPredicted RBP21.08■□□□□ 0.97
KLHDC4-206ENST00000561825 LAMC3Q9Y6N6 1575 aa21.01■□□□□ 0.95
KLHDC4-206ENST00000561825 CUX2O14529 1486 aa20.96■□□□□ 0.95
KLHDC4-206ENST00000561825 CADPSQ9ULU8 1353 aa20.95■□□□□ 0.94
KLHDC4-206ENST00000561825 TOP2AP11388 1531 aaKnown RBP20.9■□□□□ 0.94
KLHDC4-206ENST00000561825 PDS5BQ9NTI5 1447 aa20.9■□□□□ 0.94
KLHDC4-206ENST00000561825 KIF21AQ7Z4S6 1674 aa20.86■□□□□ 0.93
KLHDC4-206ENST00000561825 THOC2Q8NI27 1593 aaKnown RBP20.83■□□□□ 0.92
KLHDC4-206ENST00000561825 CFTRP13569 1480 aa20.76■□□□□ 0.91
KLHDC4-206ENST00000561825 FANCD2Q9BXW9 1451 aa20.69■□□□□ 0.9
KLHDC4-206ENST00000561825 MRC2Q9UBG0 1479 aa20.69■□□□□ 0.9
KLHDC4-206ENST00000561825 CCDC88BA6NC98 1476 aa20.68■□□□□ 0.9
KLHDC4-206ENST00000561825 CEP164Q9UPV0 1460 aa20.68■□□□□ 0.9
KLHDC4-206ENST00000561825 DNAJC5Q9H3Z4 198 aa20.63■□□□□ 0.89
KLHDC4-206ENST00000561825 WDR62O43379 1518 aa20.61■□□□□ 0.89
KLHDC4-206ENST00000561825 PRDM2Q13029 1718 aa20.55■□□□□ 0.88
KLHDC4-206ENST00000561825 URB2Q14146 1524 aaKnown RBP20.49■□□□□ 0.87
KLHDC4-206ENST00000561825 SUPT5HO00267 1087 aaKnown RBP20.42■□□□□ 0.86
KLHDC4-206ENST00000561825 ABCC8Q09428 1581 aa20.34■□□□□ 0.85
KLHDC4-206ENST00000561825 TOPBP1Q92547 1522 aa20.32■□□□□ 0.84
KLHDC4-206ENST00000561825 DNMBPQ6XZF7 1577 aa20.27■□□□□ 0.84
KLHDC4-206ENST00000561825 IFT140Q96RY7 1462 aa20.24■□□□□ 0.83
KLHDC4-206ENST00000561825 ZNF608Q9ULD9 1512 aaPredicted RBP20.19■□□□□ 0.82
KLHDC4-206ENST00000561825 POLA1P09884 1462 aaPredicted RBP20.13■□□□□ 0.81
KLHDC4-206ENST00000561825 TARBP1Q13395 1621 aaKnown RBP20.11■□□□□ 0.81
KLHDC4-206ENST00000561825 OSCARQ8IYS5 282 aa20.09■□□□□ 0.81
KLHDC4-206ENST00000561825 EIF4G3O43432 1585 aaKnown RBP20.08■□□□□ 0.81
KLHDC4-206ENST00000561825 CUX1P39880 1505 aa20.08■□□□□ 0.81
KLHDC4-206ENST00000561825 RAD54L2Q9Y4B4 1467 aa20.07■□□□□ 0.8
KLHDC4-206ENST00000561825 AQRO60306 1485 aaKnown RBP eCLIP20.06■□□□□ 0.82e-8■■■□□ 18.4
KLHDC4-206ENST00000561825 SOGA1O94964 1423 aa20.06■□□□□ 0.8
KLHDC4-206ENST00000561825 FGD5Q6ZNL6 1462 aa20.05■□□□□ 0.8
KLHDC4-206ENST00000561825 TDRD9Q8NDG6 1382 aaKnown RBP19.99■□□□□ 0.79
KLHDC4-206ENST00000561825 WDR97A6NE52 1622 aa19.94■□□□□ 0.78
KLHDC4-206ENST00000561825 FBLN2P98095 1184 aa19.9■□□□□ 0.78
KLHDC4-206ENST00000561825 TRIM41Q8WV44 630 aa19.9■□□□□ 0.78
KLHDC4-206ENST00000561825 CHD1O14646 1710 aa19.89■□□□□ 0.77
KLHDC4-206ENST00000561825 WRNQ14191 1432 aaPredicted RBP eCLIP19.87■□□□□ 0.77
KLHDC4-206ENST00000561825 SNAPC4Q5SXM2 1469 aa19.86■□□□□ 0.77
KLHDC4-206ENST00000561825 ABCA10Q8WWZ4 1543 aa19.85■□□□□ 0.77
KLHDC4-206ENST00000561825 GRIN2BQ13224 1484 aa19.84■□□□□ 0.77
KLHDC4-206ENST00000561825 TOP2BQ02880 1626 aa19.84■□□□□ 0.77
KLHDC4-206ENST00000561825 BIVM-ERCC5R4GMW8 1640 aa19.84■□□□□ 0.77
KLHDC4-206ENST00000561825 SYNJ1O43426 1573 aa19.83■□□□□ 0.77
KLHDC4-206ENST00000561825 GAPVD1Q14C86 1478 aa19.82■□□□□ 0.76
KLHDC4-206ENST00000561825 MAGI1Q96QZ7 1491 aaPredicted RBP19.8■□□□□ 0.76
KLHDC4-206ENST00000561825 CHMP7Q8WUX9 453 aaPredicted RBP19.79■□□□□ 0.76
KLHDC4-206ENST00000561825 RIMBP3CA6NJZ7 1639 aa19.79■□□□□ 0.76
KLHDC4-206ENST00000561825 RIMBP3BA6NNM3 1639 aa19.79■□□□□ 0.76
KLHDC4-206ENST00000561825 RIMBP3Q9UFD9 1639 aa19.79■□□□□ 0.76
KLHDC4-206ENST00000561825 PBRM1Q86U86 1689 aa19.78■□□□□ 0.76
KLHDC4-206ENST00000561825 ABCA5Q8WWZ7 1642 aa19.77■□□□□ 0.76
KLHDC4-206ENST00000561825 ARHGEF11O15085 1522 aa19.75■□□□□ 0.75
KLHDC4-206ENST00000561825 SYNJ2O15056 1496 aa19.73■□□□□ 0.75
KLHDC4-206ENST00000561825 CLASP1Q7Z460 1538 aa19.65■□□□□ 0.74
KLHDC4-206ENST00000561825 CYB5RLQ6IPT4 315 aa19.62■□□□□ 0.73
KLHDC4-206ENST00000561825 ADAMTS12P58397 1594 aa19.61■□□□□ 0.73
KLHDC4-206ENST00000561825 ERICH3Q5RHP9 1530 aa19.6■□□□□ 0.73
KLHDC4-206ENST00000561825 FHAD1B1AJZ9 1412 aa19.59■□□□□ 0.73
KLHDC4-206ENST00000561825 GRIN2AQ12879 1464 aa19.58■□□□□ 0.72
KLHDC4-206ENST00000561825 ARAP1Q96P48 1450 aa19.57■□□□□ 0.72
KLHDC4-206ENST00000561825 NUP160Q12769 1436 aa19.51■□□□□ 0.71
KLHDC4-206ENST00000561825 CEP170Q5SW79 1584 aa19.49■□□□□ 0.71
KLHDC4-206ENST00000561825 KIF27Q86VH2 1401 aa19.49■□□□□ 0.71
KLHDC4-206ENST00000561825 IGF1RP08069 1367 aa19.47■□□□□ 0.71
KLHDC4-206ENST00000561825 ERCC6L2Q5T890 1561 aa19.39■□□□□ 0.69
KLHDC4-206ENST00000561825 SHROOM2Q13796 1616 aa19.37■□□□□ 0.69
KLHDC4-206ENST00000561825 CUL7Q14999 1698 aa19.36■□□□□ 0.69
KLHDC4-206ENST00000561825 JPH4Q96JJ6 628 aa19.34■□□□□ 0.69
KLHDC4-206ENST00000561825 CARMIL1Q5VZK9 1371 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms