RNA–Protein interactions for RNA: ENST00000539004.5

FAM60A-205, Transcript of Protein FAM60A, humanhuman

TSL 5

Gene FAM60A, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-205ENST00000539004 AEBP2Q6ZN18 517 aaPredicted RBP20.05■□□□□ 0.8
FAM60A-205ENST00000539004 CHIC1Q5VXU3 224 aa18.93■□□□□ 0.62
FAM60A-205ENST00000539004 SENP3Q9H4L4 574 aaPredicted RBP17.38■□□□□ 0.37
FAM60A-205ENST00000539004 PHF23Q9BUL5 403 aaPredicted RBP16.97■□□□□ 0.31
FAM60A-205ENST00000539004 FOXD1Q16676 465 aa16.15■□□□□ 0.18
FAM60A-205ENST00000539004 POTEDQ86YR6 584 aa15.96■□□□□ 0.15
FAM60A-205ENST00000539004 MSH5O43196 834 aa15.49■□□□□ 0.07
FAM60A-205ENST00000539004 PIAS4Q8N2W9 510 aaPredicted RBP15□□□□□ -0.01
FAM60A-205ENST00000539004 PLPPR3Q6T4P5 718 aa14.66□□□□□ -0.06
FAM60A-205ENST00000539004 PPP6R1Q9UPN7 881 aa14.57□□□□□ -0.08
FAM60A-205ENST00000539004 ADRA2BP18089 450 aa14.51□□□□□ -0.09
FAM60A-205ENST00000539004 DMRT2Q9Y5R5 561 aa13.65□□□□□ -0.22
FAM60A-205ENST00000539004 CACNB1Q02641 598 aaPredicted RBP13.56□□□□□ -0.24
FAM60A-205ENST00000539004 SCAF1Q9H7N4 1312 aaKnown RBP13.5□□□□□ -0.25
FAM60A-205ENST00000539004 MAPK8IP2Q13387 824 aaPredicted RBP13.47□□□□□ -0.25
FAM60A-205ENST00000539004 DCAF8L1A6NGE4 600 aa13.07□□□□□ -0.32
FAM60A-205ENST00000539004 RNF39Q9H2S5 420 aa13.07□□□□□ -0.32
FAM60A-205ENST00000539004 HOXD11P31277 338 aaPredicted RBP12.94□□□□□ -0.34
FAM60A-205ENST00000539004 C1QBPQ07021 282 aaKnown RBP12.93□□□□□ -0.34
FAM60A-205ENST00000539004 DNAJC5BQ9UF47 199 aa12.73□□□□□ -0.37
FAM60A-205ENST00000539004 KCNA4P22459 653 aa12.71□□□□□ -0.37
FAM60A-205ENST00000539004 PPP4R3CPQ6ZMV5 832 aa12.71□□□□□ -0.37
FAM60A-205ENST00000539004 RNF216Q9NWF9 866 aaPredicted RBP12.7□□□□□ -0.38
FAM60A-205ENST00000539004 CNKSR2Q8WXI2 1034 aa12.67□□□□□ -0.38
FAM60A-205ENST00000539004 EHMT2Q96KQ7 1210 aa12.67□□□□□ -0.38
FAM60A-205ENST00000539004 POTEHQ6S545 545 aa12.42□□□□□ -0.42
FAM60A-205ENST00000539004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.31□□□□□ -0.44
FAM60A-205ENST00000539004 SLC4A1APQ9BWU0 796 aaKnown RBP12.22□□□□□ -0.45
FAM60A-205ENST00000539004 CSRNP3Q8WYN3 585 aa12.18□□□□□ -0.46
FAM60A-205ENST00000539004 NCBP3Q53F19 620 aaKnown RBP12.16□□□□□ -0.46
FAM60A-205ENST00000539004 DSG3P32926 999 aa12.03□□□□□ -0.48
FAM60A-205ENST00000539004 CAPN15O75808 1086 aa11.98□□□□□ -0.49
FAM60A-205ENST00000539004 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
FAM60A-205ENST00000539004 NPM3O75607 178 aaKnown RBP11.92□□□□□ -0.5
FAM60A-205ENST00000539004 SPINK5Q9NQ38 1064 aaPredicted RBP11.89□□□□□ -0.51
FAM60A-205ENST00000539004 APLP2Q06481 763 aa11.77□□□□□ -0.53
FAM60A-205ENST00000539004 ZBTB22O15209 634 aa11.71□□□□□ -0.53
FAM60A-205ENST00000539004 ZNF219Q9P2Y4 722 aaPredicted RBP11.7□□□□□ -0.54
FAM60A-205ENST00000539004 RBM42Q9BTD8 480 aaKnown RBP11.64□□□□□ -0.55
FAM60A-205ENST00000539004 TRHP20396 242 aaPredicted RBP11.61□□□□□ -0.55
FAM60A-205ENST00000539004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.58□□□□□ -0.56
FAM60A-205ENST00000539004 HNRNPUL2Q1KMD3 747 aaKnown RBP11.58□□□□□ -0.56
FAM60A-205ENST00000539004 ABCB7O75027 752 aa11.57□□□□□ -0.56
FAM60A-205ENST00000539004 CHRDL2Q6WN34 429 aa11.5□□□□□ -0.57
FAM60A-205ENST00000539004 FOXD4L1Q9NU39 408 aa11.48□□□□□ -0.57
FAM60A-205ENST00000539004 SAMD1Q6SPF0 538 aaPredicted RBP11.44□□□□□ -0.58
FAM60A-205ENST00000539004 SLC4A2P04920 1241 aa11.43□□□□□ -0.58
FAM60A-205ENST00000539004 SP7Q8TDD2 431 aaPredicted RBP11.4□□□□□ -0.58
FAM60A-205ENST00000539004 AKT1S1Q96B36 256 aa11.19□□□□□ -0.62
FAM60A-205ENST00000539004 SLC24A1O60721 1099 aa11.18□□□□□ -0.62
FAM60A-205ENST00000539004 RTN4Q9NQC3 1192 aaKnown RBP11.18□□□□□ -0.62
FAM60A-205ENST00000539004 POLA2Q14181 598 aa11.17□□□□□ -0.62
FAM60A-205ENST00000539004 AMER1Q5JTC6 1135 aaPredicted RBP11.16□□□□□ -0.62
FAM60A-205ENST00000539004 ZBTB12Q9Y330 459 aaPredicted RBP11.07□□□□□ -0.64
FAM60A-205ENST00000539004 MYCNP04198 464 aaPredicted RBP11.06□□□□□ -0.64
FAM60A-205ENST00000539004 PIP4P2Q8N4L2 257 aa11.06□□□□□ -0.64
FAM60A-205ENST00000539004 HAX1O00165 279 aa11.04□□□□□ -0.64
FAM60A-205ENST00000539004 ATXN8OSP0DMR3 200 aa11.01□□□□□ -0.65
FAM60A-205ENST00000539004 REM2Q8IYK8 340 aaPredicted RBP11.01□□□□□ -0.65
FAM60A-205ENST00000539004 FKBP8Q14318 412 aa10.98□□□□□ -0.65
FAM60A-205ENST00000539004 FXR2P51116 673 aaKnown RBP eCLIP10.94□□□□□ -0.662e-7■□□□□ 8.4
FAM60A-205ENST00000539004 PITPNM1O00562 1244 aa10.89□□□□□ -0.67
FAM60A-205ENST00000539004 OSCARQ8IYS5 282 aa10.83□□□□□ -0.68
FAM60A-205ENST00000539004 EVX2Q03828 476 aa10.73□□□□□ -0.69
FAM60A-205ENST00000539004 ATF5Q9Y2D1 282 aaPredicted RBP10.68□□□□□ -0.7
FAM60A-205ENST00000539004 LHX8Q68G74 356 aa10.67□□□□□ -0.7
FAM60A-205ENST00000539004 SPDYE2BA6NHP3 402 aa10.62□□□□□ -0.71
FAM60A-205ENST00000539004 SPDYE6P0CI01 402 aa10.62□□□□□ -0.71
FAM60A-205ENST00000539004 PRKAR2AP13861 404 aaKnown RBP10.62□□□□□ -0.71
FAM60A-205ENST00000539004 SPDYE2Q495Y8 402 aa10.62□□□□□ -0.71
FAM60A-205ENST00000539004 C19orf67A6NJJ6 358 aa10.61□□□□□ -0.71
FAM60A-205ENST00000539004 SPDYE1Q8NFV5 336 aaPredicted RBP10.58□□□□□ -0.72
FAM60A-205ENST00000539004 GABBR2O75899 941 aa10.57□□□□□ -0.72
FAM60A-205ENST00000539004 FBLN2P98095 1184 aa10.5□□□□□ -0.73
FAM60A-205ENST00000539004 CLEC11AQ9Y240 323 aa10.5□□□□□ -0.73
FAM60A-205ENST00000539004 PLSCR2Q9NRY7 297 aa10.43□□□□□ -0.74
FAM60A-205ENST00000539004 CLCN6P51797 869 aa10.42□□□□□ -0.74
FAM60A-205ENST00000539004 FBXO3Q9UK99 471 aa10.37□□□□□ -0.75
FAM60A-205ENST00000539004 SSUH2Q9Y2M2 353 aa10.36□□□□□ -0.75
FAM60A-205ENST00000539004 ZNF692Q9BU19 519 aaPredicted RBP10.34□□□□□ -0.75
FAM60A-205ENST00000539004 SPDYE4A6NLX3 237 aa10.32□□□□□ -0.76
FAM60A-205ENST00000539004 CHADLQ6NUI6 762 aa10.3□□□□□ -0.76
FAM60A-205ENST00000539004 PRR29P0C7W0 189 aa10.29□□□□□ -0.76
FAM60A-205ENST00000539004 POTEIP0CG38 1075 aa10.28□□□□□ -0.76
FAM60A-205ENST00000539004 PLCB2Q00722 1185 aa10.28□□□□□ -0.76
FAM60A-205ENST00000539004 CD44P16070 742 aaKnown RBP10.26□□□□□ -0.77
FAM60A-205ENST00000539004 VASPP50552 380 aaPredicted RBP10.23□□□□□ -0.77
FAM60A-205ENST00000539004 MKRN4PQ13434 485 aaPredicted RBP10.23□□□□□ -0.77
FAM60A-205ENST00000539004 PROM2Q8N271 834 aa10.22□□□□□ -0.77
FAM60A-205ENST00000539004 DCBLD2Q96PD2 775 aa10.22□□□□□ -0.77
FAM60A-205ENST00000539004 DCAF8L2P0C7V8 631 aa10.18□□□□□ -0.78
FAM60A-205ENST00000539004 HAP1P54257 671 aaPredicted RBP10.17□□□□□ -0.78
FAM60A-205ENST00000539004 FARP1Q9Y4F1 1045 aaPredicted RBP10.17□□□□□ -0.78
FAM60A-205ENST00000539004 IFNLR1Q8IU57 520 aaPredicted RBP10.15□□□□□ -0.78
FAM60A-205ENST00000539004 PABPN1Q86U42 306 aaKnown RBP eCLIP10.14□□□□□ -0.79
FAM60A-205ENST00000539004 ZNF579Q8NAF0 562 aaKnown RBP10.11□□□□□ -0.79
FAM60A-205ENST00000539004 PCDH10Q9P2E7 1040 aa10.08□□□□□ -0.8
FAM60A-205ENST00000539004 POTEMA6NI47 508 aa10.07□□□□□ -0.8
FAM60A-205ENST00000539004 PKD2Q13563 968 aa10.07□□□□□ -0.8
FAM60A-205ENST00000539004 OTUD5Q96G74 571 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms