RNA–Protein interactions for RNA: ENST00000445177.5

SIK3-204, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 5

Gene SIK3, Length 6,331 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-204ENST00000445177 DCAF8L2P0C7V8 631 aa23.95■■□□□ 1.42
SIK3-204ENST00000445177 NISCHQ9Y2I1 1504 aa23.87■■□□□ 1.41
SIK3-204ENST00000445177 SHROOM4Q9ULL8 1493 aa22.87■■□□□ 1.25
SIK3-204ENST00000445177 SUPT5HO00267 1087 aaKnown RBP22.82■■□□□ 1.24
SIK3-204ENST00000445177 EHMT2Q96KQ7 1210 aa22.18■■□□□ 1.14
SIK3-204ENST00000445177 FAM9AQ8IZU1 332 aaPredicted RBP21.52■■□□□ 1.04
SIK3-204ENST00000445177 TTBK1Q5TCY1 1321 aaPredicted RBP21.31■■□□□ 1
SIK3-204ENST00000445177 RANGAP1P46060 587 aaPredicted RBP21.1■□□□□ 0.97
SIK3-204ENST00000445177 PCGF6Q9BYE7 350 aa21.07■□□□□ 0.96
SIK3-204ENST00000445177 TRIM41Q8WV44 630 aa20.95■□□□□ 0.94
SIK3-204ENST00000445177 PPARGC1BQ86YN6 1023 aaKnown RBP20.77■□□□□ 0.92
SIK3-204ENST00000445177 APLP2Q06481 763 aa20.77■□□□□ 0.92
SIK3-204ENST00000445177 LOC105371045A0A1W2PR82 267 aa20.59■□□□□ 0.89
SIK3-204ENST00000445177 UBTFP17480 764 aaKnown RBP20.58■□□□□ 0.89
SIK3-204ENST00000445177 ABCC9O60706 1549 aa20.57■□□□□ 0.88
SIK3-204ENST00000445177 ATP1B4Q9UN42 357 aaPredicted RBP20.57■□□□□ 0.88
SIK3-204ENST00000445177 CHIC1Q5VXU3 224 aa20.45■□□□□ 0.86
SIK3-204ENST00000445177 PABPN1Q86U42 306 aaKnown RBP eCLIP20.41■□□□□ 0.86
SIK3-204ENST00000445177 CCER1Q8TC90 406 aaPredicted RBP20.38■□□□□ 0.85
SIK3-204ENST00000445177 ITGAEP38570 1179 aa20.05■□□□□ 0.8
SIK3-204ENST00000445177 TRIM26Q12899 539 aaPredicted RBP20.04■□□□□ 0.8
SIK3-204ENST00000445177 YTHDC1Q96MU7 727 aaKnown RBP19.97■□□□□ 0.79
SIK3-204ENST00000445177 ZEB1P37275 1124 aaPredicted RBP19.95■□□□□ 0.78
SIK3-204ENST00000445177 HNRNPUL2Q1KMD3 747 aaKnown RBP19.92■□□□□ 0.78
SIK3-204ENST00000445177 SCRIBQ14160 1630 aa19.9■□□□□ 0.78
SIK3-204ENST00000445177 HRCP23327 699 aa19.85■□□□□ 0.77
SIK3-204ENST00000445177 ZCCHC6Q5VYS8 1495 aaKnown RBP19.81■□□□□ 0.76
SIK3-204ENST00000445177 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.79■□□□□ 0.76
SIK3-204ENST00000445177 CENPBP07199 599 aaPredicted RBP19.66■□□□□ 0.74
SIK3-204ENST00000445177 PELP1Q8IZL8 1130 aaKnown RBP19.63■□□□□ 0.73
SIK3-204ENST00000445177 CNGB1Q14028 1251 aaPredicted RBP19.57■□□□□ 0.72
SIK3-204ENST00000445177 CCDC180Q9P1Z9 1646 aa19.57■□□□□ 0.72
SIK3-204ENST00000445177 POLR3GLQ9BT43 218 aa19.51■□□□□ 0.71
SIK3-204ENST00000445177 MYT1LQ9UL68 1186 aa19.49■□□□□ 0.71
SIK3-204ENST00000445177 FAM50AQ14320 339 aaKnown RBP19.47■□□□□ 0.71
SIK3-204ENST00000445177 P3H3Q8IVL6 736 aa19.45■□□□□ 0.7
SIK3-204ENST00000445177 ARID3CA6NKF2 412 aa19.42■□□□□ 0.7
SIK3-204ENST00000445177 FBLN2P98095 1184 aa19.36■□□□□ 0.69
SIK3-204ENST00000445177 MYO15BQ96JP2 1530 aa19.32■□□□□ 0.68
SIK3-204ENST00000445177 NEUROD1Q13562 356 aa19.32■□□□□ 0.68
SIK3-204ENST00000445177 CSRNP3Q8WYN3 585 aa19.3■□□□□ 0.68
SIK3-204ENST00000445177 DIEXFQ68CQ4 756 aaKnown RBP19.23■□□□□ 0.67
SIK3-204ENST00000445177 TRIM52Q96A61 297 aa19.21■□□□□ 0.67
SIK3-204ENST00000445177 NEFLP07196 543 aa19.18■□□□□ 0.66
SIK3-204ENST00000445177 RSF1Q96T23 1441 aaPredicted RBP19.13■□□□□ 0.65
SIK3-204ENST00000445177 ERICH6Q7L0X2 663 aa19.09■□□□□ 0.65
SIK3-204ENST00000445177 RB1CC1Q8TDY2 1594 aa19.06■□□□□ 0.64
SIK3-204ENST00000445177 ZNF326Q5BKZ1 582 aaKnown RBP19.05■□□□□ 0.64
SIK3-204ENST00000445177 SLC4A1APQ9BWU0 796 aaKnown RBP18.99■□□□□ 0.63
SIK3-204ENST00000445177 CECR2Q9BXF3 1484 aa18.98■□□□□ 0.63
SIK3-204ENST00000445177 ZNF777Q9ULD5 760 aaPredicted RBP18.95■□□□□ 0.62
SIK3-204ENST00000445177 DCAF1Q9Y4B6 1507 aa18.89■□□□□ 0.61
SIK3-204ENST00000445177 NACADO15069 1562 aa18.88■□□□□ 0.61
SIK3-204ENST00000445177 BCANQ96GW7 911 aa18.85■□□□□ 0.61
SIK3-204ENST00000445177 ZNF316A6NFI3 1004 aaPredicted RBP18.83■□□□□ 0.61
SIK3-204ENST00000445177 GTF3C3Q9Y5Q9 886 aa18.78■□□□□ 0.6
SIK3-204ENST00000445177 CHIC2Q9UKJ5 165 aa18.78■□□□□ 0.6
SIK3-204ENST00000445177 BAZ1BQ9UIG0 1483 aaKnown RBP18.74■□□□□ 0.59
SIK3-204ENST00000445177 MROH2BQ7Z745 1585 aa18.7■□□□□ 0.58
SIK3-204ENST00000445177 CLIP1P30622 1438 aa18.68■□□□□ 0.58
SIK3-204ENST00000445177 WRNQ14191 1432 aaPredicted RBP eCLIP18.67■□□□□ 0.58
SIK3-204ENST00000445177 CEP162Q5TB80 1403 aa18.67■□□□□ 0.58
SIK3-204ENST00000445177 ANP32CO43423 234 aa18.65■□□□□ 0.58
SIK3-204ENST00000445177 HIRIP3Q9BW71 556 aaPredicted RBP18.65■□□□□ 0.58
SIK3-204ENST00000445177 ABCC8Q09428 1581 aa18.62■□□□□ 0.57
SIK3-204ENST00000445177 SOGA1O94964 1423 aa18.6■□□□□ 0.57
SIK3-204ENST00000445177 BAZ1AQ9NRL2 1556 aaPredicted RBP18.6■□□□□ 0.57
SIK3-204ENST00000445177 WIZO95785 1651 aa18.56■□□□□ 0.56
SIK3-204ENST00000445177 GOLGA3Q08378 1498 aa18.55■□□□□ 0.56
SIK3-204ENST00000445177 DDX10Q13206 875 aaKnown RBP18.54■□□□□ 0.56
SIK3-204ENST00000445177 CHMP7Q8WUX9 453 aaPredicted RBP18.54■□□□□ 0.56
SIK3-204ENST00000445177 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.53■□□□□ 0.564e-7■■□□□ 11.9
SIK3-204ENST00000445177 PLPPR3Q6T4P5 718 aa18.52■□□□□ 0.56
SIK3-204ENST00000445177 CCDC88BA6NC98 1476 aa18.52■□□□□ 0.55
SIK3-204ENST00000445177 CDK11AQ9UQ88 783 aaPredicted RBP18.52■□□□□ 0.55
SIK3-204ENST00000445177 SENP3Q9H4L4 574 aaPredicted RBP18.51■□□□□ 0.55
SIK3-204ENST00000445177 RRP7BPQ9NSQ0 103 aa18.51■□□□□ 0.55
SIK3-204ENST00000445177 ACIN1Q9UKV3 1341 aaKnown RBP18.48■□□□□ 0.55
SIK3-204ENST00000445177 MTUS2Q5JR59 1369 aa18.48■□□□□ 0.55
SIK3-204ENST00000445177 TONSLQ96HA7 1378 aa18.48■□□□□ 0.55
SIK3-204ENST00000445177 CHGAP10645 457 aaKnown RBP18.44■□□□□ 0.54
SIK3-204ENST00000445177 KDM2AQ9Y2K7 1162 aa18.41■□□□□ 0.54
SIK3-204ENST00000445177 BCL11AQ9H165 835 aa18.4■□□□□ 0.54
SIK3-204ENST00000445177 KCNH8Q96L42 1107 aa18.4■□□□□ 0.54
SIK3-204ENST00000445177 TNIKQ9UKE5 1360 aa18.39■□□□□ 0.53
SIK3-204ENST00000445177 MIER1Q8N108 512 aa18.39■□□□□ 0.53
SIK3-204ENST00000445177 DAXXQ9UER7 740 aaPredicted RBP18.39■□□□□ 0.53
SIK3-204ENST00000445177 KIF27Q86VH2 1401 aa18.39■□□□□ 0.53
SIK3-204ENST00000445177 SALL2Q9Y467 1007 aaPredicted RBP18.37■□□□□ 0.53
SIK3-204ENST00000445177 CEP164Q9UPV0 1460 aa18.36■□□□□ 0.53
SIK3-204ENST00000445177 CLSPNQ9HAW4 1339 aa18.36■□□□□ 0.53
SIK3-204ENST00000445177 SENP3-EIF4A1A0A087X0R7 540 aa18.35■□□□□ 0.53
SIK3-204ENST00000445177 EEA1Q15075 1411 aa18.35■□□□□ 0.53
SIK3-204ENST00000445177 FAM9BQ8IZU0 186 aa18.34■□□□□ 0.53
SIK3-204ENST00000445177 CUX2O14529 1486 aa18.3■□□□□ 0.52
SIK3-204ENST00000445177 SIN3AQ96ST3 1273 aa18.28■□□□□ 0.52
SIK3-204ENST00000445177 HNRNPUQ00839 825 aaKnown RBP eCLIP18.26■□□□□ 0.51
SIK3-204ENST00000445177 EIF4G1Q04637 1599 aaKnown RBP18.26■□□□□ 0.51
SIK3-204ENST00000445177 FKBP8Q14318 412 aa18.26■□□□□ 0.51
SIK3-204ENST00000445177 SLC24A1O60721 1099 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms