RNA–Protein interactions for RNA: ENST00000375300.5

SIK3-201, Transcript of SIK family kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SIK3, Length 6,213 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-201ENST00000375300 DCAF8L2P0C7V8 631 aa28.19■■■□□ 2.1
SIK3-201ENST00000375300 NISCHQ9Y2I1 1504 aa27.41■■□□□ 1.98
SIK3-201ENST00000375300 SUPT5HO00267 1087 aaKnown RBP26.78■■□□□ 1.88
SIK3-201ENST00000375300 SHROOM4Q9ULL8 1493 aa26.62■■□□□ 1.85
SIK3-201ENST00000375300 EHMT2Q96KQ7 1210 aa26.04■■□□□ 1.76
SIK3-201ENST00000375300 PCGF6Q9BYE7 350 aa25.36■■□□□ 1.65
SIK3-201ENST00000375300 FAM9AQ8IZU1 332 aaPredicted RBP25.26■■□□□ 1.63
SIK3-201ENST00000375300 TTBK1Q5TCY1 1321 aaPredicted RBP25.14■■□□□ 1.61
SIK3-201ENST00000375300 RANGAP1P46060 587 aaPredicted RBP24.81■■□□□ 1.56
SIK3-201ENST00000375300 APLP2Q06481 763 aa24.75■■□□□ 1.55
SIK3-201ENST00000375300 PELP1Q8IZL8 1130 aaKnown RBP24.65■■□□□ 1.54
SIK3-201ENST00000375300 TRIM41Q8WV44 630 aa24.61■■□□□ 1.53
SIK3-201ENST00000375300 CCER1Q8TC90 406 aaPredicted RBP24.53■■□□□ 1.52
SIK3-201ENST00000375300 PPARGC1BQ86YN6 1023 aaKnown RBP24.45■■□□□ 1.51
SIK3-201ENST00000375300 ZEB1P37275 1124 aaPredicted RBP24.41■■□□□ 1.5
SIK3-201ENST00000375300 CENPBP07199 599 aaPredicted RBP24.34■■□□□ 1.49
SIK3-201ENST00000375300 ATP1B4Q9UN42 357 aaPredicted RBP24.27■■□□□ 1.48
SIK3-201ENST00000375300 YTHDC1Q96MU7 727 aaKnown RBP24.25■■□□□ 1.47
SIK3-201ENST00000375300 HRCP23327 699 aa24.2■■□□□ 1.46
SIK3-201ENST00000375300 UBTFP17480 764 aaKnown RBP24.2■■□□□ 1.46
SIK3-201ENST00000375300 LOC105371045A0A1W2PR82 267 aa24.19■■□□□ 1.46
SIK3-201ENST00000375300 TRIM26Q12899 539 aaPredicted RBP24.09■■□□□ 1.45
SIK3-201ENST00000375300 CHIC1Q5VXU3 224 aa24.03■■□□□ 1.44
SIK3-201ENST00000375300 ABCC9O60706 1549 aa23.96■■□□□ 1.43
SIK3-201ENST00000375300 ERICH6Q7L0X2 663 aa23.87■■□□□ 1.41
SIK3-201ENST00000375300 PABPN1Q86U42 306 aaKnown RBP eCLIP23.84■■□□□ 1.41
SIK3-201ENST00000375300 NEFLP07196 543 aa23.61■■□□□ 1.37
SIK3-201ENST00000375300 ITGAEP38570 1179 aa23.61■■□□□ 1.37
SIK3-201ENST00000375300 HNRNPUL2Q1KMD3 747 aaKnown RBP23.59■■□□□ 1.37
SIK3-201ENST00000375300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.58■■□□□ 1.37
SIK3-201ENST00000375300 DIEXFQ68CQ4 756 aaKnown RBP23.33■■□□□ 1.33
SIK3-201ENST00000375300 MYT1Q01538 1121 aa23.3■■□□□ 1.32
SIK3-201ENST00000375300 CNGB1Q14028 1251 aaPredicted RBP23.24■■□□□ 1.31
SIK3-201ENST00000375300 POLR3GLQ9BT43 218 aa23.22■■□□□ 1.31
SIK3-201ENST00000375300 MYT1LQ9UL68 1186 aa23.16■■□□□ 1.3
SIK3-201ENST00000375300 GTF3C3Q9Y5Q9 886 aa23.06■■□□□ 1.28
SIK3-201ENST00000375300 SCRIBQ14160 1630 aa23.03■■□□□ 1.28
SIK3-201ENST00000375300 BCANQ96GW7 911 aa22.91■■□□□ 1.26
SIK3-201ENST00000375300 FAM50AQ14320 339 aaKnown RBP22.9■■□□□ 1.26
SIK3-201ENST00000375300 NEUROD1Q13562 356 aa22.87■■□□□ 1.25
SIK3-201ENST00000375300 FBLN2P98095 1184 aa22.83■■□□□ 1.25
SIK3-201ENST00000375300 ARID3CA6NKF2 412 aa22.79■■□□□ 1.24
SIK3-201ENST00000375300 P3H3Q8IVL6 736 aa22.75■■□□□ 1.23
SIK3-201ENST00000375300 DAXXQ9UER7 740 aaPredicted RBP22.73■■□□□ 1.23
SIK3-201ENST00000375300 ZNF316A6NFI3 1004 aaPredicted RBP22.73■■□□□ 1.23
SIK3-201ENST00000375300 ACIN1Q9UKV3 1341 aaKnown RBP22.7■■□□□ 1.23
SIK3-201ENST00000375300 ZCCHC6Q5VYS8 1495 aaKnown RBP22.67■■□□□ 1.22
SIK3-201ENST00000375300 TRIM52Q96A61 297 aa22.65■■□□□ 1.22
SIK3-201ENST00000375300 MYO15BQ96JP2 1530 aa22.53■■□□□ 1.2
SIK3-201ENST00000375300 SLC4A1APQ9BWU0 796 aaKnown RBP22.51■■□□□ 1.19
SIK3-201ENST00000375300 ANP32CO43423 234 aa22.5■■□□□ 1.19
SIK3-201ENST00000375300 DCAF1Q9Y4B6 1507 aa22.5■■□□□ 1.19
SIK3-201ENST00000375300 CSRNP3Q8WYN3 585 aa22.48■■□□□ 1.19
SIK3-201ENST00000375300 ZNF326Q5BKZ1 582 aaKnown RBP22.47■■□□□ 1.19
SIK3-201ENST00000375300 CCDC180Q9P1Z9 1646 aa22.44■■□□□ 1.18
SIK3-201ENST00000375300 RTL5Q5HYW3 569 aaPredicted RBP22.43■■□□□ 1.18
SIK3-201ENST00000375300 CLSPNQ9HAW4 1339 aa22.37■■□□□ 1.17
SIK3-201ENST00000375300 SCAF1Q9H7N4 1312 aaKnown RBP22.33■■□□□ 1.17
SIK3-201ENST00000375300 CDK11AQ9UQ88 783 aaPredicted RBP22.33■■□□□ 1.16
SIK3-201ENST00000375300 ZNF777Q9ULD5 760 aaPredicted RBP22.26■■□□□ 1.15
SIK3-201ENST00000375300 FKBP8Q14318 412 aa22.2■■□□□ 1.14
SIK3-201ENST00000375300 DDX10Q13206 875 aaKnown RBP22.13■■□□□ 1.13
SIK3-201ENST00000375300 MIER1Q8N108 512 aa22.11■■□□□ 1.13
SIK3-201ENST00000375300 RB1CC1Q8TDY2 1594 aa22.07■■□□□ 1.12
SIK3-201ENST00000375300 PLPPR3Q6T4P5 718 aa22.02■■□□□ 1.12
SIK3-201ENST00000375300 NPM2Q86SE8 214 aaKnown RBP22.02■■□□□ 1.11
SIK3-201ENST00000375300 HIRIP3Q9BW71 556 aaPredicted RBP22■■□□□ 1.11
SIK3-201ENST00000375300 HNRNPUQ00839 825 aaKnown RBP eCLIP22■■□□□ 1.11
SIK3-201ENST00000375300 BCL11AQ9H165 835 aa21.99■■□□□ 1.11
SIK3-201ENST00000375300 RSF1Q96T23 1441 aaPredicted RBP21.97■■□□□ 1.11
SIK3-201ENST00000375300 TONSLQ96HA7 1378 aa21.96■■□□□ 1.11
SIK3-201ENST00000375300 FAM9BQ8IZU0 186 aa21.95■■□□□ 1.11
SIK3-201ENST00000375300 CHIC2Q9UKJ5 165 aa21.94■■□□□ 1.1
SIK3-201ENST00000375300 ANP32AP39687 249 aaKnown RBP21.89■■□□□ 1.09
SIK3-201ENST00000375300 CANXP27824 592 aaKnown RBP21.89■■□□□ 1.09
SIK3-201ENST00000375300 IRX6P78412 446 aaPredicted RBP21.88■■□□□ 1.09
SIK3-201ENST00000375300 SALL2Q9Y467 1007 aaPredicted RBP21.87■■□□□ 1.09
SIK3-201ENST00000375300 SENP3Q9H4L4 574 aaPredicted RBP21.83■■□□□ 1.08
SIK3-201ENST00000375300 CECR2Q9BXF3 1484 aa21.81■■□□□ 1.08
SIK3-201ENST00000375300 CLIP1P30622 1438 aa21.8■■□□□ 1.08
SIK3-201ENST00000375300 CEP162Q5TB80 1403 aa21.8■■□□□ 1.08
SIK3-201ENST00000375300 NACADO15069 1562 aa21.77■■□□□ 1.08
SIK3-201ENST00000375300 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.77■■□□□ 1.074e-7■■□□□ 11.9
SIK3-201ENST00000375300 CHGAP10645 457 aaKnown RBP21.76■■□□□ 1.07
SIK3-201ENST00000375300 CHMP7Q8WUX9 453 aaPredicted RBP21.75■■□□□ 1.07
SIK3-201ENST00000375300 BAZ1BQ9UIG0 1483 aaKnown RBP21.74■■□□□ 1.07
SIK3-201ENST00000375300 NBR1Q14596 966 aa21.73■■□□□ 1.07
SIK3-201ENST00000375300 SLC24A1O60721 1099 aa21.69■■□□□ 1.06
SIK3-201ENST00000375300 SENP3-EIF4A1A0A087X0R7 540 aa21.67■■□□□ 1.06
SIK3-201ENST00000375300 ZBTB47Q9UFB7 747 aaPredicted RBP21.66■■□□□ 1.06
SIK3-201ENST00000375300 MRS2Q9HD23 443 aa21.65■■□□□ 1.06
SIK3-201ENST00000375300 CCDC136Q96JN2 1154 aa21.62■■□□□ 1.05
SIK3-201ENST00000375300 GOLGA3Q08378 1498 aa21.62■■□□□ 1.05
SIK3-201ENST00000375300 KCNH8Q96L42 1107 aa21.61■■□□□ 1.05
SIK3-201ENST00000375300 KDM2AQ9Y2K7 1162 aa21.6■■□□□ 1.05
SIK3-201ENST00000375300 TMC1Q8TDI8 760 aa21.6■■□□□ 1.05
SIK3-201ENST00000375300 WRNQ14191 1432 aaPredicted RBP eCLIP21.59■■□□□ 1.05
SIK3-201ENST00000375300 RRP7BPQ9NSQ0 103 aa21.59■■□□□ 1.05
SIK3-201ENST00000375300 NPM1P06748 294 aaKnown RBP eCLIP21.56■■□□□ 1.04
SIK3-201ENST00000375300 MTUS2Q5JR59 1369 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms