RNA–Protein interactions for RNA: ENST00000543615.1

FAM60A-208, Transcript of Protein FAM60A, humanhuman

TSL 5

Gene FAM60A, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-208ENST00000543615 NISCHQ9Y2I1 1504 aa44.85■■■■■ 4.77
FAM60A-208ENST00000543615 CCDC180Q9P1Z9 1646 aa40.35■■■■■ 4.05
FAM60A-208ENST00000543615 ABCC9O60706 1549 aa39.57■■■■□ 3.93
FAM60A-208ENST00000543615 RB1CC1Q8TDY2 1594 aa38.1■■■■□ 3.69
FAM60A-208ENST00000543615 NACADO15069 1562 aa37.95■■■■□ 3.67
FAM60A-208ENST00000543615 MYO15BQ96JP2 1530 aa37.63■■■■□ 3.61
FAM60A-208ENST00000543615 DCAF8L2P0C7V8 631 aa37.34■■■■□ 3.57
FAM60A-208ENST00000543615 UNC13AQ9UPW8 1703 aa37.3■■■■□ 3.56
FAM60A-208ENST00000543615 ZCCHC6Q5VYS8 1495 aaKnown RBP37.28■■■■□ 3.56
FAM60A-208ENST00000543615 DCAF1Q9Y4B6 1507 aa37.25■■■■□ 3.55
FAM60A-208ENST00000543615 BICRAQ9NZM4 1560 aa36.86■■■■□ 3.49
FAM60A-208ENST00000543615 PABPN1Q86U42 306 aaKnown RBP eCLIP36.73■■■■□ 3.47
FAM60A-208ENST00000543615 SHROOM4Q9ULL8 1493 aa36.69■■■■□ 3.46
FAM60A-208ENST00000543615 DNAJC5BQ9UF47 199 aa36.61■■■■□ 3.45
FAM60A-208ENST00000543615 SCRIBQ14160 1630 aa36.49■■■■□ 3.43
FAM60A-208ENST00000543615 EIF4G1Q04637 1599 aaKnown RBP35.96■■■■□ 3.35
FAM60A-208ENST00000543615 CC2D2AQ9P2K1 1620 aa35.93■■■■□ 3.34
FAM60A-208ENST00000543615 CECR2Q9BXF3 1484 aa35.69■■■■□ 3.3
FAM60A-208ENST00000543615 SMARCA4P51532 1647 aa34.96■■■■□ 3.19
FAM60A-208ENST00000543615 NCAPD3P42695 1498 aa34.92■■■■□ 3.18
FAM60A-208ENST00000543615 SMARCA2P51531 1590 aa34.88■■■■□ 3.17
FAM60A-208ENST00000543615 BAZ1AQ9NRL2 1556 aaPredicted RBP34.88■■■■□ 3.17
FAM60A-208ENST00000543615 HMGXB3Q12766 1538 aa34.81■■■■□ 3.16
FAM60A-208ENST00000543615 ATAD2BQ9ULI0 1458 aa34.81■■■■□ 3.16
FAM60A-208ENST00000543615 PEG3Q9GZU2 1588 aa34.71■■■■□ 3.15
FAM60A-208ENST00000543615 BAZ1BQ9UIG0 1483 aaKnown RBP34.52■■■■□ 3.12
FAM60A-208ENST00000543615 MROH2BQ7Z745 1585 aa34.46■■■■□ 3.11
FAM60A-208ENST00000543615 ERCC6Q03468 1493 aa34.23■■■■□ 3.07
FAM60A-208ENST00000543615 LAMC3Q9Y6N6 1575 aa34.19■■■■□ 3.06
FAM60A-208ENST00000543615 CUX2O14529 1486 aa34.19■■■■□ 3.06
FAM60A-208ENST00000543615 WIZO95785 1651 aa34.13■■■■□ 3.05
FAM60A-208ENST00000543615 NESP48681 1621 aa34.08■■■■□ 3.05
FAM60A-208ENST00000543615 THOC2Q8NI27 1593 aaKnown RBP33.89■■■■□ 3.02
FAM60A-208ENST00000543615 RSF1Q96T23 1441 aaPredicted RBP33.87■■■■□ 3.01
FAM60A-208ENST00000543615 PDS5BQ9NTI5 1447 aa33.87■■■■□ 3.01
FAM60A-208ENST00000543615 KIF21AQ7Z4S6 1674 aa33.87■■■■□ 3.01
FAM60A-208ENST00000543615 CADPSQ9ULU8 1353 aa33.82■■■■□ 3
FAM60A-208ENST00000543615 TOP2AP11388 1531 aaKnown RBP33.81■■■■□ 3
FAM60A-208ENST00000543615 PRDM2Q13029 1718 aa33.57■■■□□ 2.96
FAM60A-208ENST00000543615 CFTRP13569 1480 aa33.56■■■□□ 2.96
FAM60A-208ENST00000543615 MRC2Q9UBG0 1479 aa33.55■■■□□ 2.96
FAM60A-208ENST00000543615 DNAJC5Q9H3Z4 198 aa33.54■■■□□ 2.96
FAM60A-208ENST00000543615 WDR62O43379 1518 aa33.51■■■□□ 2.95
FAM60A-208ENST00000543615 CEP164Q9UPV0 1460 aa33.5■■■□□ 2.95
FAM60A-208ENST00000543615 FANCD2Q9BXW9 1451 aa33.44■■■□□ 2.94
FAM60A-208ENST00000543615 CCDC88BA6NC98 1476 aa33.28■■■□□ 2.92
FAM60A-208ENST00000543615 URB2Q14146 1524 aaKnown RBP33.11■■■□□ 2.89
FAM60A-208ENST00000543615 ABCC8Q09428 1581 aa32.98■■■□□ 2.87
FAM60A-208ENST00000543615 DNMBPQ6XZF7 1577 aa32.87■■■□□ 2.85
FAM60A-208ENST00000543615 TOPBP1Q92547 1522 aa32.87■■■□□ 2.85
FAM60A-208ENST00000543615 IFT140Q96RY7 1462 aa32.83■■■□□ 2.85
FAM60A-208ENST00000543615 TARBP1Q13395 1621 aaKnown RBP32.61■■■□□ 2.81
FAM60A-208ENST00000543615 EIF4G3O43432 1585 aaKnown RBP32.6■■■□□ 2.81
FAM60A-208ENST00000543615 ZNF608Q9ULD9 1512 aaPredicted RBP32.56■■■□□ 2.8
FAM60A-208ENST00000543615 POLA1P09884 1462 aaPredicted RBP32.54■■■□□ 2.8
FAM60A-208ENST00000543615 WDR97A6NE52 1622 aa32.53■■■□□ 2.8
FAM60A-208ENST00000543615 OSCARQ8IYS5 282 aa32.5■■■□□ 2.79
FAM60A-208ENST00000543615 SUPT5HO00267 1087 aaKnown RBP32.43■■■□□ 2.78
FAM60A-208ENST00000543615 CUX1P39880 1505 aa32.39■■■□□ 2.78
FAM60A-208ENST00000543615 FGD5Q6ZNL6 1462 aa32.37■■■□□ 2.77
FAM60A-208ENST00000543615 SOGA1O94964 1423 aa32.34■■■□□ 2.77
FAM60A-208ENST00000543615 CHD1O14646 1710 aa32.33■■■□□ 2.77
FAM60A-208ENST00000543615 AQRO60306 1485 aaKnown RBP eCLIP32.3■■■□□ 2.762e-7■■■■■ 29.4
FAM60A-208ENST00000543615 RAD54L2Q9Y4B4 1467 aa32.29■■■□□ 2.76
FAM60A-208ENST00000543615 RIMBP3CA6NJZ7 1639 aa32.15■■■□□ 2.74
FAM60A-208ENST00000543615 RIMBP3BA6NNM3 1639 aa32.15■■■□□ 2.74
FAM60A-208ENST00000543615 RIMBP3Q9UFD9 1639 aa32.15■■■□□ 2.74
FAM60A-208ENST00000543615 BIVM-ERCC5R4GMW8 1640 aa32.15■■■□□ 2.74
FAM60A-208ENST00000543615 MAGI1Q96QZ7 1491 aaPredicted RBP32.15■■■□□ 2.74
FAM60A-208ENST00000543615 PBRM1Q86U86 1689 aa32.15■■■□□ 2.74
FAM60A-208ENST00000543615 TDRD9Q8NDG6 1382 aaKnown RBP32.13■■■□□ 2.73
FAM60A-208ENST00000543615 GRIN2BQ13224 1484 aa32.11■■■□□ 2.73
FAM60A-208ENST00000543615 ABCA10Q8WWZ4 1543 aa32.1■■■□□ 2.73
FAM60A-208ENST00000543615 TOP2BQ02880 1626 aa32.1■■■□□ 2.73
FAM60A-208ENST00000543615 SNAPC4Q5SXM2 1469 aa32.08■■■□□ 2.73
FAM60A-208ENST00000543615 ABCA5Q8WWZ7 1642 aa32.08■■■□□ 2.73
FAM60A-208ENST00000543615 ARHGEF11O15085 1522 aa32.06■■■□□ 2.72
FAM60A-208ENST00000543615 TRIM41Q8WV44 630 aa32.06■■■□□ 2.72
FAM60A-208ENST00000543615 GAPVD1Q14C86 1478 aa32.02■■■□□ 2.72
FAM60A-208ENST00000543615 WRNQ14191 1432 aaPredicted RBP eCLIP32■■■□□ 2.71
FAM60A-208ENST00000543615 SYNJ1O43426 1573 aa31.99■■■□□ 2.71
FAM60A-208ENST00000543615 SYNJ2O15056 1496 aa31.97■■■□□ 2.71
FAM60A-208ENST00000543615 FBLN2P98095 1184 aa31.94■■■□□ 2.7
FAM60A-208ENST00000543615 CLASP1Q7Z460 1538 aa31.92■■■□□ 2.7
FAM60A-208ENST00000543615 CHMP7Q8WUX9 453 aaPredicted RBP31.87■■■□□ 2.69
FAM60A-208ENST00000543615 ADAMTS12P58397 1594 aa31.79■■■□□ 2.68
FAM60A-208ENST00000543615 ERICH3Q5RHP9 1530 aa31.77■■■□□ 2.68
FAM60A-208ENST00000543615 ARAP1Q96P48 1450 aa31.72■■■□□ 2.67
FAM60A-208ENST00000543615 GRIN2AQ12879 1464 aa31.7■■■□□ 2.66
FAM60A-208ENST00000543615 FHAD1B1AJZ9 1412 aa31.65■■■□□ 2.66
FAM60A-208ENST00000543615 CYB5RLQ6IPT4 315 aa31.6■■■□□ 2.65
FAM60A-208ENST00000543615 NUP160Q12769 1436 aa31.58■■■□□ 2.65
FAM60A-208ENST00000543615 CEP170Q5SW79 1584 aa31.55■■■□□ 2.64
FAM60A-208ENST00000543615 SHROOM2Q13796 1616 aa31.51■■■□□ 2.63
FAM60A-208ENST00000543615 CUL7Q14999 1698 aa31.45■■■□□ 2.63
FAM60A-208ENST00000543615 KIF27Q86VH2 1401 aa31.41■■■□□ 2.62
FAM60A-208ENST00000543615 RUSC2Q8N2Y8 1516 aa31.34■■■□□ 2.61
FAM60A-208ENST00000543615 ERCC6L2Q5T890 1561 aa31.27■■■□□ 2.6
FAM60A-208ENST00000543615 IGF1RP08069 1367 aa31.23■■■□□ 2.59
FAM60A-208ENST00000543615 KIAA0586Q9BVV6 1533 aa31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms