RNA–Protein interactions for RNA: ENST00000446921.6

SIK3-205, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIK3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-205ENST00000446921 PELP1Q8IZL8 1130 aaKnown RBP27.54■■■□□ 2
SIK3-205ENST00000446921 MYT1Q01538 1121 aa26.96■■□□□ 1.91
SIK3-205ENST00000446921 HRCP23327 699 aa26.67■■□□□ 1.86
SIK3-205ENST00000446921 PPARGC1BQ86YN6 1023 aaKnown RBP26.43■■□□□ 1.82
SIK3-205ENST00000446921 PCGF6Q9BYE7 350 aa26.24■■□□□ 1.79
SIK3-205ENST00000446921 NISCHQ9Y2I1 1504 aa25.9■■□□□ 1.74
SIK3-205ENST00000446921 SCAF1Q9H7N4 1312 aaKnown RBP25.75■■□□□ 1.71
SIK3-205ENST00000446921 SUPT5HO00267 1087 aaKnown RBP25.46■■□□□ 1.67
SIK3-205ENST00000446921 TTBK1Q5TCY1 1321 aaPredicted RBP25.41■■□□□ 1.66
SIK3-205ENST00000446921 GTF3C3Q9Y5Q9 886 aa25.05■■□□□ 1.6
SIK3-205ENST00000446921 SHROOM4Q9ULL8 1493 aa25■■□□□ 1.59
SIK3-205ENST00000446921 BCL11AQ9H165 835 aa24.97■■□□□ 1.59
SIK3-205ENST00000446921 ACIN1Q9UKV3 1341 aaKnown RBP24.96■■□□□ 1.59
SIK3-205ENST00000446921 CENPBP07199 599 aaPredicted RBP24.92■■□□□ 1.58
SIK3-205ENST00000446921 ZEB1P37275 1124 aaPredicted RBP24.91■■□□□ 1.58
SIK3-205ENST00000446921 PRKCSHP14314 528 aaPredicted RBP24.89■■□□□ 1.58
SIK3-205ENST00000446921 NEUROD1Q13562 356 aa24.88■■□□□ 1.57
SIK3-205ENST00000446921 TRIM26Q12899 539 aaPredicted RBP24.78■■□□□ 1.56
SIK3-205ENST00000446921 ERICH6Q7L0X2 663 aa24.71■■□□□ 1.55
SIK3-205ENST00000446921 CHIC1Q5VXU3 224 aa24.63■■□□□ 1.53
SIK3-205ENST00000446921 LOC105371045A0A1W2PR82 267 aa24.55■■□□□ 1.52
SIK3-205ENST00000446921 FAM9AQ8IZU1 332 aaPredicted RBP24.54■■□□□ 1.52
SIK3-205ENST00000446921 MYO15BQ96JP2 1530 aa24.54■■□□□ 1.52
SIK3-205ENST00000446921 YTHDC1Q96MU7 727 aaKnown RBP24.52■■□□□ 1.52
SIK3-205ENST00000446921 DIEXFQ68CQ4 756 aaKnown RBP24.28■■□□□ 1.48
SIK3-205ENST00000446921 DCAF1Q9Y4B6 1507 aa24.14■■□□□ 1.45
SIK3-205ENST00000446921 CCER1Q8TC90 406 aaPredicted RBP24.13■■□□□ 1.45
SIK3-205ENST00000446921 EHMT2Q96KQ7 1210 aa24.09■■□□□ 1.45
SIK3-205ENST00000446921 ANP32EQ9BTT0 268 aa24.04■■□□□ 1.44
SIK3-205ENST00000446921 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.99■■□□□ 1.43
SIK3-205ENST00000446921 CSRNP3Q8WYN3 585 aa23.87■■□□□ 1.41
SIK3-205ENST00000446921 CCDC180Q9P1Z9 1646 aa23.82■■□□□ 1.4
SIK3-205ENST00000446921 APLP2Q06481 763 aa23.72■■□□□ 1.39
SIK3-205ENST00000446921 DCAF8L2P0C7V8 631 aa23.49■■□□□ 1.35
SIK3-205ENST00000446921 MIER1Q8N108 512 aa23.47■■□□□ 1.35
SIK3-205ENST00000446921 TSHZ2Q9NRE2 1034 aa23.46■■□□□ 1.35
SIK3-205ENST00000446921 ZNF316A6NFI3 1004 aaPredicted RBP23.46■■□□□ 1.35
SIK3-205ENST00000446921 BCANQ96GW7 911 aa23.44■■□□□ 1.34
SIK3-205ENST00000446921 SUPT16HQ9Y5B9 1047 aaKnown RBP23.37■■□□□ 1.33
SIK3-205ENST00000446921 ANO8Q9HCE9 1232 aaPredicted RBP23.35■■□□□ 1.33
SIK3-205ENST00000446921 SLC24A1O60721 1099 aa23.34■■□□□ 1.33
SIK3-205ENST00000446921 TRIM41Q8WV44 630 aa23.26■■□□□ 1.31
SIK3-205ENST00000446921 EIF5BO60841 1220 aaKnown RBP23.24■■□□□ 1.31
SIK3-205ENST00000446921 CCDC136Q96JN2 1154 aa23.15■■□□□ 1.3
SIK3-205ENST00000446921 CLSPNQ9HAW4 1339 aa23.05■■□□□ 1.28
SIK3-205ENST00000446921 NEFLP07196 543 aa23■■□□□ 1.27
SIK3-205ENST00000446921 RBM19Q9Y4C8 960 aaKnown RBP22.97■■□□□ 1.27
SIK3-205ENST00000446921 FKBP8Q14318 412 aa22.95■■□□□ 1.26
SIK3-205ENST00000446921 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.89■■□□□ 1.26
SIK3-205ENST00000446921 ITGAEP38570 1179 aa22.89■■□□□ 1.25
SIK3-205ENST00000446921 SALL2Q9Y467 1007 aaPredicted RBP22.87■■□□□ 1.25
SIK3-205ENST00000446921 DEKP35659 375 aaKnown RBP22.85■■□□□ 1.25
SIK3-205ENST00000446921 RTN4Q9NQC3 1192 aaKnown RBP22.78■■□□□ 1.24
SIK3-205ENST00000446921 HNRNPUL2Q1KMD3 747 aaKnown RBP22.75■■□□□ 1.23
SIK3-205ENST00000446921 NBR1Q14596 966 aa22.72■■□□□ 1.23
SIK3-205ENST00000446921 UBE2Q2Q8WVN8 375 aa22.72■■□□□ 1.23
SIK3-205ENST00000446921 PLEKHG5O94827 1062 aa22.66■■□□□ 1.22
SIK3-205ENST00000446921 MYT1LQ9UL68 1186 aa22.65■■□□□ 1.22
SIK3-205ENST00000446921 PKNOX2Q96KN3 472 aa22.64■■□□□ 1.21
SIK3-205ENST00000446921 MSH5O43196 834 aa22.61■■□□□ 1.21
SIK3-205ENST00000446921 PODXL2Q9NZ53 605 aa22.6■■□□□ 1.21
SIK3-205ENST00000446921 CDK11AQ9UQ88 783 aaPredicted RBP22.57■■□□□ 1.2
SIK3-205ENST00000446921 RTL5Q5HYW3 569 aaPredicted RBP22.55■■□□□ 1.2
SIK3-205ENST00000446921 DAXXQ9UER7 740 aaPredicted RBP22.48■■□□□ 1.19
SIK3-205ENST00000446921 ERICH6BQ5W0A0 696 aa22.42■■□□□ 1.18
SIK3-205ENST00000446921 KCNH8Q96L42 1107 aa22.37■■□□□ 1.17
SIK3-205ENST00000446921 TRIM52Q96A61 297 aa22.36■■□□□ 1.17
SIK3-205ENST00000446921 IRX6P78412 446 aaPredicted RBP22.34■■□□□ 1.17
SIK3-205ENST00000446921 GLIPR1L2Q4G1C9 344 aa22.33■■□□□ 1.17
SIK3-205ENST00000446921 IL27Q8NEV9 243 aa22.32■■□□□ 1.16
SIK3-205ENST00000446921 FANCIQ9NVI1 1328 aa22.26■■□□□ 1.15
SIK3-205ENST00000446921 UBTFP17480 764 aaKnown RBP22.2■■□□□ 1.14
SIK3-205ENST00000446921 NOP58Q9Y2X3 529 aaKnown RBP22.18■■□□□ 1.14
SIK3-205ENST00000446921 DDX10Q13206 875 aaKnown RBP22.1■■□□□ 1.13
SIK3-205ENST00000446921 TIMELESSQ9UNS1 1208 aa22.09■■□□□ 1.13
SIK3-205ENST00000446921 A0A0U1RQG5 324 aaPredicted RBP22.08■■□□□ 1.13
SIK3-205ENST00000446921 VSIG10Q8N0Z9 540 aa22.08■■□□□ 1.13
SIK3-205ENST00000446921 RANGAP1P46060 587 aaPredicted RBP22.04■■□□□ 1.12
SIK3-205ENST00000446921 ANP32AP39687 249 aaKnown RBP22.02■■□□□ 1.12
SIK3-205ENST00000446921 ZBTB47Q9UFB7 747 aaPredicted RBP22.01■■□□□ 1.11
SIK3-205ENST00000446921 ZCCHC6Q5VYS8 1495 aaKnown RBP22.01■■□□□ 1.11
SIK3-205ENST00000446921 PAK3O75914 559 aaPredicted RBP21.98■■□□□ 1.11
SIK3-205ENST00000446921 ANP32CO43423 234 aa21.92■■□□□ 1.1
SIK3-205ENST00000446921 NPM2Q86SE8 214 aaKnown RBP21.91■■□□□ 1.1
SIK3-205ENST00000446921 HNRNPUQ00839 825 aaKnown RBP eCLIP21.89■■□□□ 1.09
SIK3-205ENST00000446921 B4GALNT3Q6L9W6 998 aa21.88■■□□□ 1.09
SIK3-205ENST00000446921 LAS1LQ9Y4W2 734 aaKnown RBP21.86■■□□□ 1.09
SIK3-205ENST00000446921 NEFMP07197 916 aa21.83■■□□□ 1.09
SIK3-205ENST00000446921 HIRIP3Q9BW71 556 aaPredicted RBP21.82■■□□□ 1.08
SIK3-205ENST00000446921 ZMYND15Q9H091 742 aa21.81■■□□□ 1.08
SIK3-205ENST00000446921 PPP4R2Q9NY27 417 aa21.76■■□□□ 1.07
SIK3-205ENST00000446921 BRPF3Q9ULD4 1205 aa21.75■■□□□ 1.07
SIK3-205ENST00000446921 CEP162Q5TB80 1403 aa21.73■■□□□ 1.07
SIK3-205ENST00000446921 IPO9Q96P70 1041 aaKnown RBP21.69■■□□□ 1.06
SIK3-205ENST00000446921 PDE4CQ08493 712 aa21.69■■□□□ 1.06
SIK3-205ENST00000446921 RSPH6AQ9H0K4 717 aa21.61■■□□□ 1.05
SIK3-205ENST00000446921 WRNQ14191 1432 aaPredicted RBP eCLIP21.54■■□□□ 1.04
SIK3-205ENST00000446921 CCER2I3L3R5 266 aa21.5■■□□□ 1.03
SIK3-205ENST00000446921 CNGB1Q14028 1251 aaPredicted RBP21.49■■□□□ 1.03
SIK3-205ENST00000446921 HSP90AA2PQ14568 343 aaPredicted RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms