RNA–Protein interactions for RNA: ENST00000542983.1

FAM60A-207, Transcript of Protein FAM60A, humanhuman

TSL 4 BASIC

Gene FAM60A, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-207ENST00000542983 NISCHQ9Y2I1 1504 aa33.88■■■■□ 3.01
FAM60A-207ENST00000542983 CCDC180Q9P1Z9 1646 aa30.14■■■□□ 2.41
FAM60A-207ENST00000542983 ABCC9O60706 1549 aa29.23■■■□□ 2.27
FAM60A-207ENST00000542983 ZCCHC6Q5VYS8 1495 aaKnown RBP28.3■■■□□ 2.12
FAM60A-207ENST00000542983 RB1CC1Q8TDY2 1594 aa28.24■■■□□ 2.11
FAM60A-207ENST00000542983 NACADO15069 1562 aa28.22■■■□□ 2.11
FAM60A-207ENST00000542983 DCAF8L2P0C7V8 631 aa28.11■■■□□ 2.09
FAM60A-207ENST00000542983 MYO15BQ96JP2 1530 aa28.11■■■□□ 2.09
FAM60A-207ENST00000542983 DCAF1Q9Y4B6 1507 aa28.06■■■□□ 2.08
FAM60A-207ENST00000542983 UNC13AQ9UPW8 1703 aa27.65■■■□□ 2.02
FAM60A-207ENST00000542983 SCRIBQ14160 1630 aa27.49■■□□□ 1.99
FAM60A-207ENST00000542983 BICRAQ9NZM4 1560 aa27.36■■□□□ 1.97
FAM60A-207ENST00000542983 PABPN1Q86U42 306 aaKnown RBP eCLIP27.26■■□□□ 1.95
FAM60A-207ENST00000542983 SHROOM4Q9ULL8 1493 aa27.12■■□□□ 1.93
FAM60A-207ENST00000542983 EIF4G1Q04637 1599 aaKnown RBP26.64■■□□□ 1.86
FAM60A-207ENST00000542983 DNAJC5BQ9UF47 199 aa26.56■■□□□ 1.84
FAM60A-207ENST00000542983 CC2D2AQ9P2K1 1620 aa26.48■■□□□ 1.83
FAM60A-207ENST00000542983 CECR2Q9BXF3 1484 aa26.36■■□□□ 1.81
FAM60A-207ENST00000542983 SMARCA4P51532 1647 aa26.3■■□□□ 1.8
FAM60A-207ENST00000542983 BAZ1AQ9NRL2 1556 aaPredicted RBP26.29■■□□□ 1.8
FAM60A-207ENST00000542983 MROH2BQ7Z745 1585 aa26.12■■□□□ 1.77
FAM60A-207ENST00000542983 SMARCA2P51531 1590 aa26.07■■□□□ 1.76
FAM60A-207ENST00000542983 ATAD2BQ9ULI0 1458 aa26.05■■□□□ 1.76
FAM60A-207ENST00000542983 PEG3Q9GZU2 1588 aa26.03■■□□□ 1.76
FAM60A-207ENST00000542983 NCAPD3P42695 1498 aa25.99■■□□□ 1.75
FAM60A-207ENST00000542983 HMGXB3Q12766 1538 aa25.96■■□□□ 1.75
FAM60A-207ENST00000542983 BAZ1BQ9UIG0 1483 aaKnown RBP25.88■■□□□ 1.73
FAM60A-207ENST00000542983 WIZO95785 1651 aa25.87■■□□□ 1.73
FAM60A-207ENST00000542983 RSF1Q96T23 1441 aaPredicted RBP25.85■■□□□ 1.73
FAM60A-207ENST00000542983 TOP2AP11388 1531 aaKnown RBP25.63■■□□□ 1.69
FAM60A-207ENST00000542983 LAMC3Q9Y6N6 1575 aa25.35■■□□□ 1.65
FAM60A-207ENST00000542983 NESP48681 1621 aa25.34■■□□□ 1.65
FAM60A-207ENST00000542983 SUPT5HO00267 1087 aaKnown RBP25.25■■□□□ 1.63
FAM60A-207ENST00000542983 CCDC88BA6NC98 1476 aa25.25■■□□□ 1.63
FAM60A-207ENST00000542983 CADPSQ9ULU8 1353 aa25.23■■□□□ 1.63
FAM60A-207ENST00000542983 ERCC6Q03468 1493 aa25.19■■□□□ 1.62
FAM60A-207ENST00000542983 CFTRP13569 1480 aa25.15■■□□□ 1.62
FAM60A-207ENST00000542983 KIF21AQ7Z4S6 1674 aa25.13■■□□□ 1.61
FAM60A-207ENST00000542983 PRDM2Q13029 1718 aa25.11■■□□□ 1.61
FAM60A-207ENST00000542983 PDS5BQ9NTI5 1447 aa25.11■■□□□ 1.61
FAM60A-207ENST00000542983 THOC2Q8NI27 1593 aaKnown RBP25.01■■□□□ 1.59
FAM60A-207ENST00000542983 FANCD2Q9BXW9 1451 aa24.99■■□□□ 1.59
FAM60A-207ENST00000542983 CEP164Q9UPV0 1460 aa24.97■■□□□ 1.59
FAM60A-207ENST00000542983 MRC2Q9UBG0 1479 aa24.89■■□□□ 1.57
FAM60A-207ENST00000542983 CUX2O14529 1486 aa24.87■■□□□ 1.57
FAM60A-207ENST00000542983 WDR62O43379 1518 aa24.82■■□□□ 1.56
FAM60A-207ENST00000542983 URB2Q14146 1524 aaKnown RBP24.74■■□□□ 1.55
FAM60A-207ENST00000542983 DNMBPQ6XZF7 1577 aa24.64■■□□□ 1.54
FAM60A-207ENST00000542983 TOPBP1Q92547 1522 aa24.62■■□□□ 1.53
FAM60A-207ENST00000542983 ABCC8Q09428 1581 aa24.6■■□□□ 1.53
FAM60A-207ENST00000542983 CUX1P39880 1505 aa24.51■■□□□ 1.51
FAM60A-207ENST00000542983 POLA1P09884 1462 aaPredicted RBP24.42■■□□□ 1.5
FAM60A-207ENST00000542983 IFT140Q96RY7 1462 aa24.41■■□□□ 1.5
FAM60A-207ENST00000542983 FGD5Q6ZNL6 1462 aa24.4■■□□□ 1.5
FAM60A-207ENST00000542983 WRNQ14191 1432 aaPredicted RBP eCLIP24.39■■□□□ 1.5
FAM60A-207ENST00000542983 BIVM-ERCC5R4GMW8 1640 aa24.39■■□□□ 1.49
FAM60A-207ENST00000542983 SYNJ1O43426 1573 aa24.37■■□□□ 1.49
FAM60A-207ENST00000542983 TOP2BQ02880 1626 aa24.36■■□□□ 1.49
FAM60A-207ENST00000542983 TARBP1Q13395 1621 aaKnown RBP24.35■■□□□ 1.49
FAM60A-207ENST00000542983 ZNF608Q9ULD9 1512 aaPredicted RBP24.29■■□□□ 1.48
FAM60A-207ENST00000542983 EIF4G3O43432 1585 aaKnown RBP24.29■■□□□ 1.48
FAM60A-207ENST00000542983 RAD54L2Q9Y4B4 1467 aa24.28■■□□□ 1.48
FAM60A-207ENST00000542983 WDR97A6NE52 1622 aa24.27■■□□□ 1.48
FAM60A-207ENST00000542983 SOGA1O94964 1423 aa24.27■■□□□ 1.48
FAM60A-207ENST00000542983 ABCA10Q8WWZ4 1543 aa24.15■■□□□ 1.46
FAM60A-207ENST00000542983 AQRO60306 1485 aaKnown RBP eCLIP24.13■■□□□ 1.452e-7■■■■■ 29.4
FAM60A-207ENST00000542983 ABCA5Q8WWZ7 1642 aa24.11■■□□□ 1.45
FAM60A-207ENST00000542983 TDRD9Q8NDG6 1382 aaKnown RBP24.1■■□□□ 1.45
FAM60A-207ENST00000542983 PBRM1Q86U86 1689 aa24.07■■□□□ 1.44
FAM60A-207ENST00000542983 GAPVD1Q14C86 1478 aa24.02■■□□□ 1.44
FAM60A-207ENST00000542983 GRIN2BQ13224 1484 aa24■■□□□ 1.43
FAM60A-207ENST00000542983 SNAPC4Q5SXM2 1469 aa23.99■■□□□ 1.43
FAM60A-207ENST00000542983 MAGI1Q96QZ7 1491 aaPredicted RBP23.94■■□□□ 1.42
FAM60A-207ENST00000542983 CHD1O14646 1710 aa23.94■■□□□ 1.42
FAM60A-207ENST00000542983 ERICH3Q5RHP9 1530 aa23.89■■□□□ 1.41
FAM60A-207ENST00000542983 ADAMTS12P58397 1594 aa23.87■■□□□ 1.41
FAM60A-207ENST00000542983 KIF27Q86VH2 1401 aa23.85■■□□□ 1.41
FAM60A-207ENST00000542983 SYNJ2O15056 1496 aa23.84■■□□□ 1.41
FAM60A-207ENST00000542983 TRIM41Q8WV44 630 aa23.84■■□□□ 1.41
FAM60A-207ENST00000542983 DNAJC5Q9H3Z4 198 aa23.78■■□□□ 1.4
FAM60A-207ENST00000542983 FBLN2P98095 1184 aa23.76■■□□□ 1.39
FAM60A-207ENST00000542983 OSCARQ8IYS5 282 aa23.76■■□□□ 1.39
FAM60A-207ENST00000542983 CUL7Q14999 1698 aa23.76■■□□□ 1.39
FAM60A-207ENST00000542983 FHAD1B1AJZ9 1412 aa23.76■■□□□ 1.39
FAM60A-207ENST00000542983 CHMP7Q8WUX9 453 aaPredicted RBP23.73■■□□□ 1.39
FAM60A-207ENST00000542983 GRIN2AQ12879 1464 aa23.72■■□□□ 1.39
FAM60A-207ENST00000542983 RUSC2Q8N2Y8 1516 aa23.68■■□□□ 1.38
FAM60A-207ENST00000542983 IGF1RP08069 1367 aa23.67■■□□□ 1.38
FAM60A-207ENST00000542983 CHIC1Q5VXU3 224 aa23.66■■□□□ 1.38
FAM60A-207ENST00000542983 CLASP1Q7Z460 1538 aa23.65■■□□□ 1.38
FAM60A-207ENST00000542983 CEP170Q5SW79 1584 aa23.62■■□□□ 1.37
FAM60A-207ENST00000542983 NUP160Q12769 1436 aa23.59■■□□□ 1.37
FAM60A-207ENST00000542983 CARMIL1Q5VZK9 1371 aa23.56■■□□□ 1.36
FAM60A-207ENST00000542983 EEA1Q15075 1411 aa23.52■■□□□ 1.36
FAM60A-207ENST00000542983 RIMBP3CA6NJZ7 1639 aa23.5■■□□□ 1.35
FAM60A-207ENST00000542983 RIMBP3BA6NNM3 1639 aa23.5■■□□□ 1.35
FAM60A-207ENST00000542983 RIMBP3Q9UFD9 1639 aa23.5■■□□□ 1.35
FAM60A-207ENST00000542983 ARHGEF11O15085 1522 aa23.49■■□□□ 1.35
FAM60A-207ENST00000542983 RAPGEF2Q9Y4G8 1499 aa23.49■■□□□ 1.35
FAM60A-207ENST00000542983 SHROOM2Q13796 1616 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms