RNA–Protein interactions for RNA: ENST00000581395.5

PER1-212, Transcript of period circadian regulator 1, humanhuman

TSL 2

Gene PER1, Length 3,209 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PER1-212ENST00000581395 NISCHQ9Y2I1 1504 aa29.83■■■□□ 2.37
PER1-212ENST00000581395 SHROOM4Q9ULL8 1493 aa27.23■■□□□ 1.95
PER1-212ENST00000581395 SUPT5HO00267 1087 aaKnown RBP26.94■■□□□ 1.9
PER1-212ENST00000581395 DCAF8L2P0C7V8 631 aa26.66■■□□□ 1.86
PER1-212ENST00000581395 PCGF6Q9BYE7 350 aa25.76■■□□□ 1.71
PER1-212ENST00000581395 CHIC1Q5VXU3 224 aa25.61■■□□□ 1.69
PER1-212ENST00000581395 PPARGC1BQ86YN6 1023 aaKnown RBP25.5■■□□□ 1.67
PER1-212ENST00000581395 EHMT2Q96KQ7 1210 aa25.48■■□□□ 1.67
PER1-212ENST00000581395 LOC105371045A0A1W2PR82 267 aa25.46■■□□□ 1.67
PER1-212ENST00000581395 MYO15BQ96JP2 1530 aa25.42■■□□□ 1.66
PER1-212ENST00000581395 HRCP23327 699 aa25.42■■□□□ 1.66
PER1-212ENST00000581395 FAM9AQ8IZU1 332 aaPredicted RBP25.14■■□□□ 1.61
PER1-212ENST00000581395 ZCCHC6Q5VYS8 1495 aaKnown RBP25.12■■□□□ 1.61
PER1-212ENST00000581395 TRIM41Q8WV44 630 aa24.65■■□□□ 1.54
PER1-212ENST00000581395 TTBK1Q5TCY1 1321 aaPredicted RBP24.61■■□□□ 1.53
PER1-212ENST00000581395 TRIM26Q12899 539 aaPredicted RBP24.57■■□□□ 1.52
PER1-212ENST00000581395 PELP1Q8IZL8 1130 aaKnown RBP24.52■■□□□ 1.52
PER1-212ENST00000581395 CCDC180Q9P1Z9 1646 aa24.5■■□□□ 1.51
PER1-212ENST00000581395 SCAF1Q9H7N4 1312 aaKnown RBP24.23■■□□□ 1.47
PER1-212ENST00000581395 DCAF1Q9Y4B6 1507 aa24.22■■□□□ 1.47
PER1-212ENST00000581395 SCRIBQ14160 1630 aa24.14■■□□□ 1.45
PER1-212ENST00000581395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.13■■□□□ 1.45
PER1-212ENST00000581395 RSF1Q96T23 1441 aaPredicted RBP24.02■■□□□ 1.44
PER1-212ENST00000581395 CCER1Q8TC90 406 aaPredicted RBP24■■□□□ 1.43
PER1-212ENST00000581395 ABCC9O60706 1549 aa23.96■■□□□ 1.43
PER1-212ENST00000581395 ZEB1P37275 1124 aaPredicted RBP23.92■■□□□ 1.42
PER1-212ENST00000581395 RANGAP1P46060 587 aaPredicted RBP23.85■■□□□ 1.41
PER1-212ENST00000581395 RB1CC1Q8TDY2 1594 aa23.82■■□□□ 1.4
PER1-212ENST00000581395 CECR2Q9BXF3 1484 aa23.77■■□□□ 1.4
PER1-212ENST00000581395 UBTFP17480 764 aaKnown RBP23.68■■□□□ 1.38
PER1-212ENST00000581395 GTF3C3Q9Y5Q9 886 aa23.67■■□□□ 1.38
PER1-212ENST00000581395 NEUROD1Q13562 356 aa23.65■■□□□ 1.38
PER1-212ENST00000581395 YTHDC1Q96MU7 727 aaKnown RBP23.64■■□□□ 1.37
PER1-212ENST00000581395 ACIN1Q9UKV3 1341 aaKnown RBP23.58■■□□□ 1.37
PER1-212ENST00000581395 MYT1Q01538 1121 aa23.5■■□□□ 1.35
PER1-212ENST00000581395 HNRNPUL2Q1KMD3 747 aaKnown RBP23.5■■□□□ 1.35
PER1-212ENST00000581395 MROH2BQ7Z745 1585 aa23.5■■□□□ 1.35
PER1-212ENST00000581395 DIEXFQ68CQ4 756 aaKnown RBP23.5■■□□□ 1.35
PER1-212ENST00000581395 CENPBP07199 599 aaPredicted RBP23.49■■□□□ 1.35
PER1-212ENST00000581395 PABPN1Q86U42 306 aaKnown RBP eCLIP23.48■■□□□ 1.35
PER1-212ENST00000581395 WIZO95785 1651 aa23.36■■□□□ 1.33
PER1-212ENST00000581395 ABCC8Q09428 1581 aa23.27■■□□□ 1.32
PER1-212ENST00000581395 SOGA1O94964 1423 aa23.21■■□□□ 1.31
PER1-212ENST00000581395 CCDC88BA6NC98 1476 aa23.2■■□□□ 1.3
PER1-212ENST00000581395 CSRNP3Q8WYN3 585 aa23.18■■□□□ 1.3
PER1-212ENST00000581395 APLP2Q06481 763 aa23.13■■□□□ 1.29
PER1-212ENST00000581395 CEP162Q5TB80 1403 aa23.1■■□□□ 1.29
PER1-212ENST00000581395 RUSC2Q8N2Y8 1516 aa23.09■■□□□ 1.29
PER1-212ENST00000581395 ZNF316A6NFI3 1004 aaPredicted RBP23.03■■□□□ 1.28
PER1-212ENST00000581395 ITGAEP38570 1179 aa23.02■■□□□ 1.28
PER1-212ENST00000581395 MIER1Q8N108 512 aa23■■□□□ 1.27
PER1-212ENST00000581395 NACADO15069 1562 aa22.94■■□□□ 1.26
PER1-212ENST00000581395 BAZ1AQ9NRL2 1556 aaPredicted RBP22.82■■□□□ 1.24
PER1-212ENST00000581395 TNIKQ9UKE5 1360 aa22.79■■□□□ 1.24
PER1-212ENST00000581395 ATP1B4Q9UN42 357 aaPredicted RBP22.74■■□□□ 1.23
PER1-212ENST00000581395 WRNQ14191 1432 aaPredicted RBP eCLIP22.67■■□□□ 1.22
PER1-212ENST00000581395 CLIP1P30622 1438 aa22.66■■□□□ 1.22
PER1-212ENST00000581395 TOP2AP11388 1531 aaKnown RBP22.62■■□□□ 1.21
PER1-212ENST00000581395 SMARCA2P51531 1590 aa22.62■■□□□ 1.21
PER1-212ENST00000581395 GOLGA3Q08378 1498 aa22.61■■□□□ 1.21
PER1-212ENST00000581395 SMARCA4P51532 1647 aa22.58■■□□□ 1.2
PER1-212ENST00000581395 KANK4Q5T7N3 995 aaPredicted RBP22.56■■□□□ 1.2
PER1-212ENST00000581395 BCANQ96GW7 911 aa22.52■■□□□ 1.19
PER1-212ENST00000581395 P3H3Q8IVL6 736 aa22.51■■□□□ 1.19
PER1-212ENST00000581395 HIRIP3Q9BW71 556 aaPredicted RBP22.49■■□□□ 1.19
PER1-212ENST00000581395 RAPGEF2Q9Y4G8 1499 aa22.48■■□□□ 1.19
PER1-212ENST00000581395 EIF4G1Q04637 1599 aaKnown RBP22.46■■□□□ 1.19
PER1-212ENST00000581395 KCNH8Q96L42 1107 aa22.42■■□□□ 1.18
PER1-212ENST00000581395 EEA1Q15075 1411 aa22.41■■□□□ 1.18
PER1-212ENST00000581395 CEP164Q9UPV0 1460 aa22.39■■□□□ 1.18
PER1-212ENST00000581395 FAM50AQ14320 339 aaKnown RBP22.38■■□□□ 1.17
PER1-212ENST00000581395 BCL11AQ9H165 835 aa22.38■■□□□ 1.17
PER1-212ENST00000581395 VPS8Q8N3P4 1428 aa22.34■■□□□ 1.17
PER1-212ENST00000581395 SYNJ1O43426 1573 aa22.33■■□□□ 1.17
PER1-212ENST00000581395 DDX10Q13206 875 aaKnown RBP22.27■■□□□ 1.16
PER1-212ENST00000581395 BAZ1BQ9UIG0 1483 aaKnown RBP22.27■■□□□ 1.16
PER1-212ENST00000581395 SUPT16HQ9Y5B9 1047 aaKnown RBP22.27■■□□□ 1.16
PER1-212ENST00000581395 ANP32EQ9BTT0 268 aa22.26■■□□□ 1.15
PER1-212ENST00000581395 SIN3AQ96ST3 1273 aa22.25■■□□□ 1.15
PER1-212ENST00000581395 DHX57Q6P158 1386 aaKnown RBP22.19■■□□□ 1.14
PER1-212ENST00000581395 UNC13AQ9UPW8 1703 aa22.18■■□□□ 1.14
PER1-212ENST00000581395 TSHZ2Q9NRE2 1034 aa22.17■■□□□ 1.14
PER1-212ENST00000581395 ATAD2BQ9ULI0 1458 aa22.16■■□□□ 1.14
PER1-212ENST00000581395 TRIM52Q96A61 297 aa22.15■■□□□ 1.14
PER1-212ENST00000581395 KIF21BO75037 1637 aa22.14■■□□□ 1.13
PER1-212ENST00000581395 CNGB1Q14028 1251 aaPredicted RBP22.13■■□□□ 1.13
PER1-212ENST00000581395 FKBP8Q14318 412 aa22.07■■□□□ 1.12
PER1-212ENST00000581395 ARID3CA6NKF2 412 aa22.04■■□□□ 1.12
PER1-212ENST00000581395 BICRAQ9NZM4 1560 aa22.04■■□□□ 1.12
PER1-212ENST00000581395 ARAP1Q96P48 1450 aa22.01■■□□□ 1.11
PER1-212ENST00000581395 CCNB3Q8WWL7 1395 aa22■■□□□ 1.11
PER1-212ENST00000581395 RAB3GAP2Q9H2M9 1393 aa21.96■■□□□ 1.11
PER1-212ENST00000581395 IRX6P78412 446 aaPredicted RBP21.95■■□□□ 1.1
PER1-212ENST00000581395 KIF27Q86VH2 1401 aa21.91■■□□□ 1.1
PER1-212ENST00000581395 ERICH6Q7L0X2 663 aa21.91■■□□□ 1.1
PER1-212ENST00000581395 NEFLP07196 543 aa21.89■■□□□ 1.1
PER1-212ENST00000581395 SENP3-EIF4A1A0A087X0R7 540 aa21.87■■□□□ 1.09
PER1-212ENST00000581395 CHIC2Q9UKJ5 165 aa21.85■■□□□ 1.09
PER1-212ENST00000581395 CUX2O14529 1486 aa21.84■■□□□ 1.09
PER1-212ENST00000581395 CLSPNQ9HAW4 1339 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms