RNA–Protein interactions for RNA: ENST00000579065.1

PER1-208, Transcript of period circadian regulator 1, humanhuman

TSL 5

Gene PER1, Length 1,262 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PER1-208ENST00000579065 NISCHQ9Y2I1 1504 aa40.43■■■■■ 4.06
PER1-208ENST00000579065 CCDC180Q9P1Z9 1646 aa36.01■■■■□ 3.35
PER1-208ENST00000579065 ABCC9O60706 1549 aa35.1■■■■□ 3.21
PER1-208ENST00000579065 RB1CC1Q8TDY2 1594 aa33.83■■■■□ 3.01
PER1-208ENST00000579065 NACADO15069 1562 aa33.79■■■■□ 3
PER1-208ENST00000579065 DCAF8L2P0C7V8 631 aa33.73■■■□□ 2.99
PER1-208ENST00000579065 ZCCHC6Q5VYS8 1495 aaKnown RBP33.7■■■□□ 2.99
PER1-208ENST00000579065 MYO15BQ96JP2 1530 aa33.59■■■□□ 2.97
PER1-208ENST00000579065 DCAF1Q9Y4B6 1507 aa33.47■■■□□ 2.95
PER1-208ENST00000579065 UNC13AQ9UPW8 1703 aa33.12■■■□□ 2.89
PER1-208ENST00000579065 SCRIBQ14160 1630 aa32.82■■■□□ 2.84
PER1-208ENST00000579065 BICRAQ9NZM4 1560 aa32.77■■■□□ 2.84
PER1-208ENST00000579065 PABPN1Q86U42 306 aaKnown RBP eCLIP32.76■■■□□ 2.83
PER1-208ENST00000579065 SHROOM4Q9ULL8 1493 aa32.46■■■□□ 2.79
PER1-208ENST00000579065 DNAJC5BQ9UF47 199 aa32.09■■■□□ 2.73
PER1-208ENST00000579065 EIF4G1Q04637 1599 aaKnown RBP31.91■■■□□ 2.7
PER1-208ENST00000579065 CC2D2AQ9P2K1 1620 aa31.78■■■□□ 2.68
PER1-208ENST00000579065 CECR2Q9BXF3 1484 aa31.52■■■□□ 2.64
PER1-208ENST00000579065 SMARCA4P51532 1647 aa31.4■■■□□ 2.62
PER1-208ENST00000579065 BAZ1AQ9NRL2 1556 aaPredicted RBP31.36■■■□□ 2.61
PER1-208ENST00000579065 SMARCA2P51531 1590 aa31.17■■■□□ 2.58
PER1-208ENST00000579065 ATAD2BQ9ULI0 1458 aa31.16■■■□□ 2.58
PER1-208ENST00000579065 MROH2BQ7Z745 1585 aa31.16■■■□□ 2.58
PER1-208ENST00000579065 NCAPD3P42695 1498 aa31.14■■■□□ 2.57
PER1-208ENST00000579065 PEG3Q9GZU2 1588 aa31.08■■■□□ 2.57
PER1-208ENST00000579065 HMGXB3Q12766 1538 aa31.03■■■□□ 2.56
PER1-208ENST00000579065 BAZ1BQ9UIG0 1483 aaKnown RBP30.95■■■□□ 2.54
PER1-208ENST00000579065 WIZO95785 1651 aa30.87■■■□□ 2.53
PER1-208ENST00000579065 RSF1Q96T23 1441 aaPredicted RBP30.81■■■□□ 2.52
PER1-208ENST00000579065 TOP2AP11388 1531 aaKnown RBP30.53■■■□□ 2.48
PER1-208ENST00000579065 NESP48681 1621 aa30.38■■■□□ 2.45
PER1-208ENST00000579065 LAMC3Q9Y6N6 1575 aa30.36■■■□□ 2.45
PER1-208ENST00000579065 ERCC6Q03468 1493 aa30.27■■■□□ 2.44
PER1-208ENST00000579065 CADPSQ9ULU8 1353 aa30.23■■■□□ 2.43
PER1-208ENST00000579065 CCDC88BA6NC98 1476 aa30.14■■■□□ 2.42
PER1-208ENST00000579065 PDS5BQ9NTI5 1447 aa30.12■■■□□ 2.41
PER1-208ENST00000579065 KIF21AQ7Z4S6 1674 aa30.11■■■□□ 2.41
PER1-208ENST00000579065 CFTRP13569 1480 aa30.07■■■□□ 2.4
PER1-208ENST00000579065 SUPT5HO00267 1087 aaKnown RBP30.06■■■□□ 2.4
PER1-208ENST00000579065 PRDM2Q13029 1718 aa29.98■■■□□ 2.39
PER1-208ENST00000579065 THOC2Q8NI27 1593 aaKnown RBP29.95■■■□□ 2.39
PER1-208ENST00000579065 CUX2O14529 1486 aa29.93■■■□□ 2.38
PER1-208ENST00000579065 FANCD2Q9BXW9 1451 aa29.91■■■□□ 2.38
PER1-208ENST00000579065 CEP164Q9UPV0 1460 aa29.88■■■□□ 2.37
PER1-208ENST00000579065 MRC2Q9UBG0 1479 aa29.82■■■□□ 2.36
PER1-208ENST00000579065 WDR62O43379 1518 aa29.72■■■□□ 2.35
PER1-208ENST00000579065 URB2Q14146 1524 aaKnown RBP29.61■■■□□ 2.33
PER1-208ENST00000579065 ABCC8Q09428 1581 aa29.45■■■□□ 2.31
PER1-208ENST00000579065 TOPBP1Q92547 1522 aa29.44■■■□□ 2.3
PER1-208ENST00000579065 DNMBPQ6XZF7 1577 aa29.43■■■□□ 2.3
PER1-208ENST00000579065 IFT140Q96RY7 1462 aa29.24■■■□□ 2.27
PER1-208ENST00000579065 CUX1P39880 1505 aa29.24■■■□□ 2.27
PER1-208ENST00000579065 POLA1P09884 1462 aaPredicted RBP29.19■■■□□ 2.26
PER1-208ENST00000579065 TARBP1Q13395 1621 aaKnown RBP29.13■■■□□ 2.25
PER1-208ENST00000579065 FGD5Q6ZNL6 1462 aa29.13■■■□□ 2.25
PER1-208ENST00000579065 ZNF608Q9ULD9 1512 aaPredicted RBP29.09■■■□□ 2.25
PER1-208ENST00000579065 SOGA1O94964 1423 aa29.06■■■□□ 2.24
PER1-208ENST00000579065 WRNQ14191 1432 aaPredicted RBP eCLIP29.06■■■□□ 2.24
PER1-208ENST00000579065 BIVM-ERCC5R4GMW8 1640 aa29.05■■■□□ 2.24
PER1-208ENST00000579065 RAD54L2Q9Y4B4 1467 aa29.04■■■□□ 2.24
PER1-208ENST00000579065 TOP2BQ02880 1626 aa29.03■■■□□ 2.24
PER1-208ENST00000579065 EIF4G3O43432 1585 aaKnown RBP29.03■■■□□ 2.24
PER1-208ENST00000579065 SYNJ1O43426 1573 aa29.01■■■□□ 2.24
PER1-208ENST00000579065 WDR97A6NE52 1622 aa28.94■■■□□ 2.22
PER1-208ENST00000579065 AQRO60306 1485 aaKnown RBP eCLIP28.92■■■□□ 2.22
PER1-208ENST00000579065 DNAJC5Q9H3Z4 198 aa28.88■■■□□ 2.21
PER1-208ENST00000579065 TDRD9Q8NDG6 1382 aaKnown RBP28.88■■■□□ 2.21
PER1-208ENST00000579065 ABCA10Q8WWZ4 1543 aa28.85■■■□□ 2.21
PER1-208ENST00000579065 ABCA5Q8WWZ7 1642 aa28.76■■■□□ 2.2
PER1-208ENST00000579065 PBRM1Q86U86 1689 aa28.75■■■□□ 2.19
PER1-208ENST00000579065 GAPVD1Q14C86 1478 aa28.74■■■□□ 2.19
PER1-208ENST00000579065 GRIN2BQ13224 1484 aa28.73■■■□□ 2.19
PER1-208ENST00000579065 CHD1O14646 1710 aa28.69■■■□□ 2.18
PER1-208ENST00000579065 SNAPC4Q5SXM2 1469 aa28.68■■■□□ 2.18
PER1-208ENST00000579065 MAGI1Q96QZ7 1491 aaPredicted RBP28.66■■■□□ 2.18
PER1-208ENST00000579065 OSCARQ8IYS5 282 aa28.66■■■□□ 2.18
PER1-208ENST00000579065 FBLN2P98095 1184 aa28.57■■■□□ 2.16
PER1-208ENST00000579065 SYNJ2O15056 1496 aa28.54■■■□□ 2.16
PER1-208ENST00000579065 ERICH3Q5RHP9 1530 aa28.53■■■□□ 2.16
PER1-208ENST00000579065 CHMP7Q8WUX9 453 aaPredicted RBP28.5■■■□□ 2.15
PER1-208ENST00000579065 ADAMTS12P58397 1594 aa28.49■■■□□ 2.15
PER1-208ENST00000579065 KIF27Q86VH2 1401 aa28.46■■■□□ 2.15
PER1-208ENST00000579065 FHAD1B1AJZ9 1412 aa28.41■■■□□ 2.14
PER1-208ENST00000579065 TRIM41Q8WV44 630 aa28.4■■■□□ 2.14
PER1-208ENST00000579065 GRIN2AQ12879 1464 aa28.36■■■□□ 2.13
PER1-208ENST00000579065 CUL7Q14999 1698 aa28.32■■■□□ 2.12
PER1-208ENST00000579065 CLASP1Q7Z460 1538 aa28.32■■■□□ 2.12
PER1-208ENST00000579065 IGF1RP08069 1367 aa28.29■■■□□ 2.12
PER1-208ENST00000579065 RIMBP3CA6NJZ7 1639 aa28.25■■■□□ 2.11
PER1-208ENST00000579065 RIMBP3BA6NNM3 1639 aa28.25■■■□□ 2.11
PER1-208ENST00000579065 RIMBP3Q9UFD9 1639 aa28.25■■■□□ 2.11
PER1-208ENST00000579065 CEP170Q5SW79 1584 aa28.23■■■□□ 2.11
PER1-208ENST00000579065 ARHGEF11O15085 1522 aa28.23■■■□□ 2.11
PER1-208ENST00000579065 NUP160Q12769 1436 aa28.21■■■□□ 2.11
PER1-208ENST00000579065 RUSC2Q8N2Y8 1516 aa28.19■■■□□ 2.1
PER1-208ENST00000579065 CARMIL1Q5VZK9 1371 aa28.15■■■□□ 2.1
PER1-208ENST00000579065 CHIC1Q5VXU3 224 aa28.07■■■□□ 2.08
PER1-208ENST00000579065 SHROOM2Q13796 1616 aa28.04■■■□□ 2.08
PER1-208ENST00000579065 RAPGEF2Q9Y4G8 1499 aa28.01■■■□□ 2.07
PER1-208ENST00000579065 ARAP1Q96P48 1450 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 178.6 ms