RNA–Protein interactions for RNA: ENST00000317276.8

PER1-201, Transcript of period circadian regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PER1, Length 4,707 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PER1-201ENST00000317276 NISCHQ9Y2I1 1504 aa28.7■■■□□ 2.19
PER1-201ENST00000317276 DCAF8L2P0C7V8 631 aa27.67■■■□□ 2.02
PER1-201ENST00000317276 SUPT5HO00267 1087 aaKnown RBP26.26■■□□□ 1.79
PER1-201ENST00000317276 SHROOM4Q9ULL8 1493 aa26.13■■□□□ 1.77
PER1-201ENST00000317276 EHMT2Q96KQ7 1210 aa24.71■■□□□ 1.55
PER1-201ENST00000317276 APLP2Q06481 763 aa24.69■■□□□ 1.54
PER1-201ENST00000317276 TRIM41Q8WV44 630 aa24.59■■□□□ 1.53
PER1-201ENST00000317276 FAM9AQ8IZU1 332 aaPredicted RBP24.56■■□□□ 1.52
PER1-201ENST00000317276 ABCC9O60706 1549 aa24.28■■□□□ 1.48
PER1-201ENST00000317276 UBTFP17480 764 aaKnown RBP24.08■■□□□ 1.44
PER1-201ENST00000317276 CCDC180Q9P1Z9 1646 aa24.06■■□□□ 1.44
PER1-201ENST00000317276 PCGF6Q9BYE7 350 aa24.02■■□□□ 1.44
PER1-201ENST00000317276 ZEB1P37275 1124 aaPredicted RBP23.9■■□□□ 1.42
PER1-201ENST00000317276 RANGAP1P46060 587 aaPredicted RBP23.89■■□□□ 1.41
PER1-201ENST00000317276 CHIC1Q5VXU3 224 aa23.87■■□□□ 1.41
PER1-201ENST00000317276 ZCCHC6Q5VYS8 1495 aaKnown RBP23.86■■□□□ 1.41
PER1-201ENST00000317276 TTBK1Q5TCY1 1321 aaPredicted RBP23.86■■□□□ 1.41
PER1-201ENST00000317276 ATP1B4Q9UN42 357 aaPredicted RBP23.74■■□□□ 1.39
PER1-201ENST00000317276 PABPN1Q86U42 306 aaKnown RBP eCLIP23.71■■□□□ 1.39
PER1-201ENST00000317276 CCER1Q8TC90 406 aaPredicted RBP23.64■■□□□ 1.37
PER1-201ENST00000317276 PELP1Q8IZL8 1130 aaKnown RBP23.57■■□□□ 1.36
PER1-201ENST00000317276 TRIM26Q12899 539 aaPredicted RBP23.52■■□□□ 1.36
PER1-201ENST00000317276 LOC105371045A0A1W2PR82 267 aa23.4■■□□□ 1.34
PER1-201ENST00000317276 SCRIBQ14160 1630 aa23.4■■□□□ 1.34
PER1-201ENST00000317276 RB1CC1Q8TDY2 1594 aa23.24■■□□□ 1.31
PER1-201ENST00000317276 PPARGC1BQ86YN6 1023 aaKnown RBP23.23■■□□□ 1.31
PER1-201ENST00000317276 CENPBP07199 599 aaPredicted RBP23.19■■□□□ 1.3
PER1-201ENST00000317276 NACADO15069 1562 aa23.17■■□□□ 1.3
PER1-201ENST00000317276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.11■■□□□ 1.29
PER1-201ENST00000317276 HNRNPUL2Q1KMD3 747 aaKnown RBP23.11■■□□□ 1.29
PER1-201ENST00000317276 DCAF1Q9Y4B6 1507 aa23.08■■□□□ 1.29
PER1-201ENST00000317276 HRCP23327 699 aa22.99■■□□□ 1.27
PER1-201ENST00000317276 ITGAEP38570 1179 aa22.95■■□□□ 1.26
PER1-201ENST00000317276 CSRNP3Q8WYN3 585 aa22.92■■□□□ 1.26
PER1-201ENST00000317276 MYT1LQ9UL68 1186 aa22.79■■□□□ 1.24
PER1-201ENST00000317276 RSF1Q96T23 1441 aaPredicted RBP22.74■■□□□ 1.23
PER1-201ENST00000317276 FAM50AQ14320 339 aaKnown RBP22.66■■□□□ 1.22
PER1-201ENST00000317276 NEFLP07196 543 aa22.64■■□□□ 1.21
PER1-201ENST00000317276 BAZ1AQ9NRL2 1556 aaPredicted RBP22.58■■□□□ 1.2
PER1-201ENST00000317276 FBLN2P98095 1184 aa22.56■■□□□ 1.2
PER1-201ENST00000317276 MYO15BQ96JP2 1530 aa22.55■■□□□ 1.2
PER1-201ENST00000317276 YTHDC1Q96MU7 727 aaKnown RBP22.5■■□□□ 1.19
PER1-201ENST00000317276 BAZ1BQ9UIG0 1483 aaKnown RBP22.5■■□□□ 1.19
PER1-201ENST00000317276 EEA1Q15075 1411 aa22.48■■□□□ 1.19
PER1-201ENST00000317276 TRIM52Q96A61 297 aa22.43■■□□□ 1.18
PER1-201ENST00000317276 CDK11AQ9UQ88 783 aaPredicted RBP22.42■■□□□ 1.18
PER1-201ENST00000317276 P3H3Q8IVL6 736 aa22.37■■□□□ 1.17
PER1-201ENST00000317276 POLR3GLQ9BT43 218 aa22.35■■□□□ 1.17
PER1-201ENST00000317276 WRNQ14191 1432 aaPredicted RBP eCLIP22.31■■□□□ 1.16
PER1-201ENST00000317276 CECR2Q9BXF3 1484 aa22.29■■□□□ 1.16
PER1-201ENST00000317276 DIEXFQ68CQ4 756 aaKnown RBP22.26■■□□□ 1.15
PER1-201ENST00000317276 ERICH6Q7L0X2 663 aa22.26■■□□□ 1.15
PER1-201ENST00000317276 NEUROD1Q13562 356 aa22.21■■□□□ 1.15
PER1-201ENST00000317276 GOLGA3Q08378 1498 aa22.2■■□□□ 1.14
PER1-201ENST00000317276 CLIP1P30622 1438 aa22.16■■□□□ 1.14
PER1-201ENST00000317276 KIF27Q86VH2 1401 aa22.13■■□□□ 1.13
PER1-201ENST00000317276 SMARCA2P51531 1590 aa22.12■■□□□ 1.13
PER1-201ENST00000317276 MROH2BQ7Z745 1585 aa22.1■■□□□ 1.13
PER1-201ENST00000317276 ARID3CA6NKF2 412 aa22.08■■□□□ 1.13
PER1-201ENST00000317276 CEP164Q9UPV0 1460 aa22.07■■□□□ 1.12
PER1-201ENST00000317276 CHMP7Q8WUX9 453 aaPredicted RBP22.04■■□□□ 1.12
PER1-201ENST00000317276 ZNF316A6NFI3 1004 aaPredicted RBP22.04■■□□□ 1.12
PER1-201ENST00000317276 ZNF777Q9ULD5 760 aaPredicted RBP22.03■■□□□ 1.12
PER1-201ENST00000317276 TNIKQ9UKE5 1360 aa22.03■■□□□ 1.12
PER1-201ENST00000317276 CEP162Q5TB80 1403 aa22.01■■□□□ 1.11
PER1-201ENST00000317276 MTUS2Q5JR59 1369 aa21.98■■□□□ 1.11
PER1-201ENST00000317276 NPM1P06748 294 aaKnown RBP eCLIP21.97■■□□□ 1.11
PER1-201ENST00000317276 SLC4A1APQ9BWU0 796 aaKnown RBP21.95■■□□□ 1.11
PER1-201ENST00000317276 ANP32CO43423 234 aa21.95■■□□□ 1.1
PER1-201ENST00000317276 CCDC88BA6NC98 1476 aa21.94■■□□□ 1.1
PER1-201ENST00000317276 ZNF326Q5BKZ1 582 aaKnown RBP21.94■■□□□ 1.1
PER1-201ENST00000317276 TOP2AP11388 1531 aaKnown RBP21.92■■□□□ 1.1
PER1-201ENST00000317276 CNGB1Q14028 1251 aaPredicted RBP21.92■■□□□ 1.1
PER1-201ENST00000317276 ACIN1Q9UKV3 1341 aaKnown RBP21.86■■□□□ 1.09
PER1-201ENST00000317276 TONSLQ96HA7 1378 aa21.85■■□□□ 1.09
PER1-201ENST00000317276 ERCC6Q03468 1493 aa21.82■■□□□ 1.08
PER1-201ENST00000317276 TSPY4P0CV99 314 aa21.79■■□□□ 1.08
PER1-201ENST00000317276 TSPY10P0CW01 314 aa21.79■■□□□ 1.08
PER1-201ENST00000317276 WIZO95785 1651 aa21.76■■□□□ 1.07
PER1-201ENST00000317276 PDS5BQ9NTI5 1447 aa21.75■■□□□ 1.07
PER1-201ENST00000317276 SMARCA4P51532 1647 aa21.75■■□□□ 1.07
PER1-201ENST00000317276 CUX2O14529 1486 aa21.74■■□□□ 1.07
PER1-201ENST00000317276 CARMIL1Q5VZK9 1371 aa21.72■■□□□ 1.07
PER1-201ENST00000317276 ATAD2BQ9ULI0 1458 aa21.71■■□□□ 1.07
PER1-201ENST00000317276 PLEKHD1A6NEE1 506 aa21.71■■□□□ 1.07
PER1-201ENST00000317276 FHAD1B1AJZ9 1412 aa21.7■■□□□ 1.06
PER1-201ENST00000317276 SOGA1O94964 1423 aa21.68■■□□□ 1.06
PER1-201ENST00000317276 CHIC2Q9UKJ5 165 aa21.67■■□□□ 1.06
PER1-201ENST00000317276 ESF1Q9H501 851 aaKnown RBP21.67■■□□□ 1.06
PER1-201ENST00000317276 DAXXQ9UER7 740 aaPredicted RBP21.67■■□□□ 1.06
PER1-201ENST00000317276 CADPSQ9ULU8 1353 aa21.63■■□□□ 1.05
PER1-201ENST00000317276 ABCC8Q09428 1581 aa21.62■■□□□ 1.05
PER1-201ENST00000317276 BCANQ96GW7 911 aa21.54■■□□□ 1.04
PER1-201ENST00000317276 MYT1Q01538 1121 aa21.53■■□□□ 1.04
PER1-201ENST00000317276 VPS8Q8N3P4 1428 aa21.5■■□□□ 1.03
PER1-201ENST00000317276 CFDP1Q9UEE9 299 aaPredicted RBP21.5■■□□□ 1.03
PER1-201ENST00000317276 NEFMP07197 916 aa21.49■■□□□ 1.03
PER1-201ENST00000317276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.49■■□□□ 1.03
PER1-201ENST00000317276 STAG3Q9UJ98 1225 aa21.49■■□□□ 1.03
PER1-201ENST00000317276 CHGAP10645 457 aaKnown RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms