Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 TOMM7-206ENST00000496129 520 ntTSL 1 (best)4.6□□□□□ -1.671e-8■■■■□ 20.7
RPS3P23396 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.5■□□□□ 0.555e-9■■■■□ 20.7
RPS3P23396 CDK4-210ENST00000551888 636 ntTSL 217.19■□□□□ 0.345e-9■■■■□ 20.7
RPS3P23396 CDK4-207ENST00000550419 919 ntTSL 317.13■□□□□ 0.335e-9■■■■□ 20.7
RPS3P23396 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.245e-9■■■■□ 20.7
RPS3P23396 CDK4-204ENST00000547281 825 ntTSL 315.55■□□□□ 0.085e-9■■■■□ 20.7
RPS3P23396 CDK4-215ENST00000553237 952 ntTSL 215.32■□□□□ 0.045e-9■■■■□ 20.7
RPS3P23396 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.12■□□□□ 0.015e-9■■■■□ 20.7
RPS3P23396 CDK4-203ENST00000546489 776 ntTSL 512.89□□□□□ -0.355e-9■■■■□ 20.7
RPS3P23396 EMP3-209ENST00000599704 753 ntTSL 314.75□□□□□ -0.053e-6■■■■□ 20.7
RPS3P23396 EMP3-203ENST00000594198 263 ntTSL 27.9□□□□□ -1.143e-6■■■■□ 20.7
RPS3P23396 ALDOA-215ENST00000565355 538 ntTSL 515.11■□□□□ 0.019e-52■■■■□ 20.7
RPS3P23396 PTTG1IP-206ENST00000480234 398 ntTSL 319.4■□□□□ 0.76e-7■■■■□ 20.7
RPS3P23396 CTSB-210ENST00000526195 560 ntTSL 415.67■□□□□ 0.12e-9■■■■□ 20.7
RPS3P23396 CTSB-208ENST00000525076 550 ntTSL 514.49□□□□□ -0.092e-9■■■■□ 20.7
RPS3P23396 CTSB-230ENST00000534149 524 ntTSL 414.11□□□□□ -0.152e-9■■■■□ 20.7
RPS3P23396 YIPF3-209ENST00000500090 406 ntTSL 312□□□□□ -0.492e-8■■■■□ 20.7
RPS3P23396 YIPF3-207ENST00000488966 337 ntTSL 210.19□□□□□ -0.782e-8■■■■□ 20.7
RPS3P23396 PLOD2-205ENST00000469350 723 ntTSL 52.31□□□□□ -2.042e-13■■■■□ 20.7
RPS3P23396 TKFC-217ENST00000533393 597 ntTSL 522.53■■□□□ 1.22e-8■■■■□ 20.7
RPS3P23396 TKFC-214ENST00000530456 589 ntTSL 220.45■□□□□ 0.862e-8■■■■□ 20.7
RPS3P23396 NFE2L1-219ENST00000584137 529 ntTSL 421.42■■□□□ 1.021e-7■■■■□ 20.7
RPS3P23396 SERPINF1-202ENST00000570731 459 ntTSL 511.35□□□□□ -0.592e-22■■■■□ 20.7
RPS3P23396 C5orf15-201ENST00000231512 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.48e-7■■■■□ 20.7
RPS3P23396 C5orf15-202ENST00000507191 635 ntTSL 211.3□□□□□ -0.68e-7■■■■□ 20.7
RPS3P23396 SDHA-206ENST00000505555 2230 ntTSL 219.21■□□□□ 0.676e-7■■■■□ 20.7
RPS3P23396 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.282e-7■■■■□ 20.7
RPS3P23396 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.532e-7■■■■□ 20.7
RPS3P23396 TECR-202ENST00000593637 1043 ntTSL 321.29■■□□□ 13e-7■■■■□ 20.7
RPS3P23396 TECR-209ENST00000596953 1043 ntTSL 221.29■■□□□ 13e-7■■■■□ 20.7
RPS3P23396 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.13e-7■■■■□ 20.7
RPS3P23396 TECR-210ENST00000597607 1164 ntTSL 315.7■□□□□ 0.13e-7■■■■□ 20.7
RPS3P23396 TECR-216ENST00000598987 1202 ntTSL 214.3□□□□□ -0.123e-7■■■■□ 20.7
RPS3P23396 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.3□□□□□ -0.123e-7■■■■□ 20.7
RPS3P23396 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.3□□□□□ -0.123e-7■■■■□ 20.7
RPS3P23396 TECR-211ENST00000598298 868 ntTSL 512.8□□□□□ -0.363e-7■■■■□ 20.7
RPS3P23396 TECR-212ENST00000598333 822 ntTSL 39.86□□□□□ -0.833e-7■■■■□ 20.7
RPS3P23396 CDK1-207ENST00000519078 723 ntTSL 36.77□□□□□ -1.331e-8■■■■□ 20.7
RPS3P23396 IFNGR1-202ENST00000414770 748 ntTSL 321.58■■□□□ 1.058e-10■■■■□ 20.7
RPS3P23396 IFNGR1-204ENST00000478333 643 ntTSL 220.66■□□□□ 0.98e-10■■■■□ 20.7
RPS3P23396 CORO1C-216ENST00000551059 474 ntTSL 218.28■□□□□ 0.528e-10■■■■□ 20.7
RPS3P23396 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.478e-10■■■■□ 20.7
RPS3P23396 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.68■□□□□ 0.428e-10■■■■□ 20.7
RPS3P23396 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.53■□□□□ 0.48e-10■■■■□ 20.7
RPS3P23396 RCC1-209ENST00000430407 1121 ntTSL 517.12■□□□□ 0.338e-10■■■■□ 20.7
RPS3P23396 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.278e-10■■■■□ 20.7
RPS3P23396 PSMD4-205ENST00000445776 703 ntTSL 316.4■□□□□ 0.228e-10■■■■□ 20.7
RPS3P23396 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.88■□□□□ 0.138e-10■■■■□ 20.7
RPS3P23396 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.132e-6■■■■□ 20.7
RPS3P23396 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.67■□□□□ 0.18e-10■■■■□ 20.7
RPS3P23396 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.098e-10■■■■□ 20.7
RPS3P23396 IFNGR1-203ENST00000458076 753 ntTSL 315.53■□□□□ 0.088e-10■■■■□ 20.7
RPS3P23396 NDUFS8-214ENST00000531796 615 ntTSL 315.44■□□□□ 0.068e-10■■■■□ 20.7
RPS3P23396 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.22■□□□□ 0.038e-10■■■■□ 20.7
RPS3P23396 CLUH-210ENST00000574426 3844 ntAPPRIS ALT2 TSL 514.61□□□□□ -0.072e-6■■■■□ 20.7
RPS3P23396 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC13.77□□□□□ -0.211e-6■■■■□ 20.7
RPS3P23396 PDCD6-204ENST00000506909 458 ntTSL 313.23□□□□□ -0.298e-10■■■■□ 20.7
RPS3P23396 RCC1-210ENST00000434290 1070 ntTSL 513.2□□□□□ -0.38e-10■■■■□ 20.7
RPS3P23396 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.38e-10■■■■□ 20.7
RPS3P23396 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC13.18□□□□□ -0.38e-10■■■■□ 20.7
RPS3P23396 RCC1-206ENST00000419074 997 ntTSL 513.14□□□□□ -0.318e-10■■■■□ 20.7
RPS3P23396 RCC1-207ENST00000427469 903 ntTSL 512.66□□□□□ -0.388e-10■■■■□ 20.7
RPS3P23396 QARS-211ENST00000470113 954 ntTSL 512.2□□□□□ -0.467e-12■■■■□ 20.7
RPS3P23396 PSMD4-202ENST00000368884 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.518e-10■■■■□ 20.7
RPS3P23396 GOT2-201ENST00000245206 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.541e-6■■■■□ 20.7
RPS3P23396 RCC1-208ENST00000429051 538 ntTSL 311.18□□□□□ -0.628e-10■■■■□ 20.7
RPS3P23396 PDCD6-210ENST00000513582 3500 ntTSL 210.89□□□□□ -0.678e-10■■■■□ 20.7
RPS3P23396 PDCD6-209ENST00000512466 3763 ntTSL 210.15□□□□□ -0.788e-10■■■■□ 20.7
RPS3P23396 SPARC-202ENST00000520687 1598 ntTSL 29.9□□□□□ -0.822e-6■■■■□ 20.7
RPS3P23396 PSMD4-204ENST00000437736 787 ntTSL 59.89□□□□□ -0.838e-10■■■■□ 20.7
RPS3P23396 PSMD4-208ENST00000462970 900 ntTSL 59.36□□□□□ -0.918e-10■■■■□ 20.7
RPS3P23396 PDCD6-208ENST00000511482 878 ntTSL 58.75□□□□□ -1.018e-10■■■■□ 20.7
RPS3P23396 PDCD6-205ENST00000507473 486 ntTSL 37.71□□□□□ -1.188e-10■■■■□ 20.7
RPS3P23396 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.171e-11■■■■□ 20.7
RPS3P23396 MT2A-204ENST00000563985 688 ntTSL 213.3□□□□□ -0.281e-11■■■■□ 20.7
RPS3P23396 MT2A-202ENST00000561491 581 ntTSL 2 BASIC13.23□□□□□ -0.291e-11■■■■□ 20.7
RPS3P23396 MT2A-203ENST00000562017 903 nt13.06□□□□□ -0.321e-11■■■■□ 20.7
RPS3P23396 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.33■□□□□ 0.375e-9■■■■□ 20.7
RPS3P23396 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.88□□□□□ -0.035e-9■■■■□ 20.7
RPS3P23396 LMNA-206ENST00000368300 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.475e-9■■■■□ 20.7
RPS3P23396 HLA-C-206ENST00000470363 1279 nt11.16□□□□□ -0.625e-7■■■■□ 20.7
RPS3P23396 TF-211ENST00000485977 580 ntTSL 318.46■□□□□ 0.554e-27■■■■□ 20.7
RPS3P23396 RTN3-214ENST00000545432 545 ntTSL 413.87□□□□□ -0.199e-10■■■■□ 20.7
RPS3P23396 RTN3-213ENST00000543552 529 ntTSL 412.62□□□□□ -0.399e-10■■■■□ 20.7
RPS3P23396 RTN3-209ENST00000538995 814 ntTSL 211.22□□□□□ -0.619e-10■■■■□ 20.7
RPS3P23396 RTN3-201ENST00000338850 493 ntTSL 210.63□□□□□ -0.719e-10■■■■□ 20.7
RPS3P23396 NGRN-201ENST00000331497 2784 ntTSL 1 (best)15.19■□□□□ 0.021e-8■■■■□ 20.7
RPS3P23396 AC091167.3-201ENST00000561573 3838 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.581e-8■■■■□ 20.7
RPS3P23396 NGRN-202ENST00000379095 7237 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.721e-8■■■■□ 20.7
RPS3P23396 POR-212ENST00000447222 2332 ntTSL 516.2■□□□□ 0.184e-14■■■■□ 20.7
RPS3P23396 RAB7A-202ENST00000464496 576 ntTSL 28.1□□□□□ -1.111e-13■■■■□ 20.6
RPS3P23396 ARG2-202ENST00000556491 457 ntTSL 55.85□□□□□ -1.472e-9■■■■□ 20.6
RPS3P23396 RAB7A-207ENST00000491681 552 ntTSL 25.16□□□□□ -1.583e-13■■■■□ 20.6
RPS3P23396 UBB-208ENST00000578706 500 ntTSL 35.91□□□□□ -1.464e-15■■■■□ 20.6
RPS3P23396 HNRNPH2-201ENST00000316594 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.781e-6■■■■□ 20.6
RPS3P23396 ALDH18A1-203ENST00000483788 750 ntTSL 319.12■□□□□ 0.651e-8■■■■□ 20.6
RPS3P23396 TUBB3-212ENST00000556565 566 ntTSL 417.11■□□□□ 0.333e-8■■■■□ 20.6
RPS3P23396 TUBB3-202ENST00000553656 550 ntTSL 413.59□□□□□ -0.233e-8■■■■□ 20.6
RPS3P23396 NDST1-206ENST00000522491 777 ntTSL 220.41■□□□□ 0.862e-6■■■■□ 20.6
RPS3P23396 NDST1-204ENST00000519157 576 ntTSL 519.19■□□□□ 0.662e-6■■■■□ 20.6
Retrieved 100 of 24,271 protein–RNA pairs in 255.7 ms