RNA–Protein interactions for RNA: ENST00000368884.7

PSMD4-202, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMD4, Length 1,350 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-202ENST00000368884 NISCHQ9Y2I1 1504 aa29.15■■■□□ 2.26
PSMD4-202ENST00000368884 CCDC180Q9P1Z9 1646 aa25.87■■□□□ 1.73
PSMD4-202ENST00000368884 ABCC9O60706 1549 aa25.23■■□□□ 1.63
PSMD4-202ENST00000368884 DCAF8L2P0C7V8 631 aa24.35■■□□□ 1.49
PSMD4-202ENST00000368884 ZCCHC6Q5VYS8 1495 aaKnown RBP24.31■■□□□ 1.48
PSMD4-202ENST00000368884 RB1CC1Q8TDY2 1594 aa24.31■■□□□ 1.48
PSMD4-202ENST00000368884 NACADO15069 1562 aa24.29■■□□□ 1.48
PSMD4-202ENST00000368884 MYO15BQ96JP2 1530 aa24.15■■□□□ 1.46
PSMD4-202ENST00000368884 DCAF1Q9Y4B6 1507 aa24.1■■□□□ 1.45
PSMD4-202ENST00000368884 UNC13AQ9UPW8 1703 aa23.77■■□□□ 1.4
PSMD4-202ENST00000368884 SCRIBQ14160 1630 aa23.65■■□□□ 1.38
PSMD4-202ENST00000368884 PABPN1Q86U42 306 aaKnown RBP eCLIP23.6■■□□□ 1.37
PSMD4-202ENST00000368884 BICRAQ9NZM4 1560 aa23.56■■□□□ 1.36
PSMD4-202ENST00000368884 SHROOM4Q9ULL8 1493 aa23.29■■□□□ 1.32
PSMD4-202ENST00000368884 DNAJC5BQ9UF47 199 aa23.03■■□□□ 1.28
PSMD4-202ENST00000368884 EIF4G1Q04637 1599 aaKnown RBP22.93■■□□□ 1.26
PSMD4-202ENST00000368884 CC2D2AQ9P2K1 1620 aa22.82■■□□□ 1.24
PSMD4-202ENST00000368884 CECR2Q9BXF3 1484 aa22.71■■□□□ 1.23
PSMD4-202ENST00000368884 SMARCA4P51532 1647 aa22.61■■□□□ 1.21
PSMD4-202ENST00000368884 BAZ1AQ9NRL2 1556 aaPredicted RBP22.59■■□□□ 1.21
PSMD4-202ENST00000368884 MROH2BQ7Z745 1585 aa22.48■■□□□ 1.19
PSMD4-202ENST00000368884 ATAD2BQ9ULI0 1458 aa22.44■■□□□ 1.18
PSMD4-202ENST00000368884 SMARCA2P51531 1590 aa22.42■■□□□ 1.18
PSMD4-202ENST00000368884 NCAPD3P42695 1498 aa22.4■■□□□ 1.18
PSMD4-202ENST00000368884 PEG3Q9GZU2 1588 aa22.35■■□□□ 1.17
PSMD4-202ENST00000368884 HMGXB3Q12766 1538 aa22.31■■□□□ 1.16
PSMD4-202ENST00000368884 BAZ1BQ9UIG0 1483 aaKnown RBP22.28■■□□□ 1.16
PSMD4-202ENST00000368884 WIZO95785 1651 aa22.26■■□□□ 1.15
PSMD4-202ENST00000368884 RSF1Q96T23 1441 aaPredicted RBP22.25■■□□□ 1.15
PSMD4-202ENST00000368884 TOP2AP11388 1531 aaKnown RBP22.01■■□□□ 1.11
PSMD4-202ENST00000368884 NESP48681 1621 aa21.86■■□□□ 1.09
PSMD4-202ENST00000368884 LAMC3Q9Y6N6 1575 aa21.81■■□□□ 1.08
PSMD4-202ENST00000368884 SUPT5HO00267 1087 aaKnown RBP21.81■■□□□ 1.08
PSMD4-202ENST00000368884 CADPSQ9ULU8 1353 aa21.77■■□□□ 1.08
PSMD4-202ENST00000368884 CCDC88BA6NC98 1476 aa21.75■■□□□ 1.07
PSMD4-202ENST00000368884 ERCC6Q03468 1493 aa21.74■■□□□ 1.07
PSMD4-202ENST00000368884 PDS5BQ9NTI5 1447 aa21.65■■□□□ 1.06
PSMD4-202ENST00000368884 CFTRP13569 1480 aa21.65■■□□□ 1.06
PSMD4-202ENST00000368884 KIF21AQ7Z4S6 1674 aa21.61■■□□□ 1.05
PSMD4-202ENST00000368884 FANCD2Q9BXW9 1451 aa21.53■■□□□ 1.04
PSMD4-202ENST00000368884 PRDM2Q13029 1718 aa21.53■■□□□ 1.04
PSMD4-202ENST00000368884 THOC2Q8NI27 1593 aaKnown RBP21.51■■□□□ 1.03
PSMD4-202ENST00000368884 CEP164Q9UPV0 1460 aa21.5■■□□□ 1.03
PSMD4-202ENST00000368884 CUX2O14529 1486 aa21.45■■□□□ 1.02
PSMD4-202ENST00000368884 MRC2Q9UBG0 1479 aa21.44■■□□□ 1.02
PSMD4-202ENST00000368884 WDR62O43379 1518 aa21.36■■□□□ 1.01
PSMD4-202ENST00000368884 URB2Q14146 1524 aaKnown RBP21.31■■□□□ 1
PSMD4-202ENST00000368884 TOPBP1Q92547 1522 aa21.2■□□□□ 0.98
PSMD4-202ENST00000368884 ABCC8Q09428 1581 aa21.18■□□□□ 0.98
PSMD4-202ENST00000368884 DNMBPQ6XZF7 1577 aa21.18■□□□□ 0.98
PSMD4-202ENST00000368884 CUX1P39880 1505 aa21.09■□□□□ 0.97
PSMD4-202ENST00000368884 IFT140Q96RY7 1462 aa21.03■□□□□ 0.96
PSMD4-202ENST00000368884 POLA1P09884 1462 aaPredicted RBP21.02■□□□□ 0.95
PSMD4-202ENST00000368884 FGD5Q6ZNL6 1462 aa21■□□□□ 0.95
PSMD4-202ENST00000368884 WRNQ14191 1432 aaPredicted RBP eCLIP20.99■□□□□ 0.95
PSMD4-202ENST00000368884 TARBP1Q13395 1621 aaKnown RBP20.95■□□□□ 0.94
PSMD4-202ENST00000368884 RAD54L2Q9Y4B4 1467 aa20.94■□□□□ 0.94
PSMD4-202ENST00000368884 SYNJ1O43426 1573 aa20.94■□□□□ 0.94
PSMD4-202ENST00000368884 SOGA1O94964 1423 aa20.94■□□□□ 0.94
PSMD4-202ENST00000368884 ZNF608Q9ULD9 1512 aaPredicted RBP20.93■□□□□ 0.94
PSMD4-202ENST00000368884 TOP2BQ02880 1626 aa20.92■□□□□ 0.94
PSMD4-202ENST00000368884 BIVM-ERCC5R4GMW8 1640 aa20.92■□□□□ 0.94
PSMD4-202ENST00000368884 EIF4G3O43432 1585 aaKnown RBP20.87■□□□□ 0.93
PSMD4-202ENST00000368884 AQRO60306 1485 aaKnown RBP eCLIP20.83■□□□□ 0.933e-7■■■■□ 21.2
PSMD4-202ENST00000368884 TDRD9Q8NDG6 1382 aaKnown RBP20.82■□□□□ 0.92
PSMD4-202ENST00000368884 WDR97A6NE52 1622 aa20.82■□□□□ 0.92
PSMD4-202ENST00000368884 ABCA10Q8WWZ4 1543 aa20.78■□□□□ 0.92
PSMD4-202ENST00000368884 GAPVD1Q14C86 1478 aa20.7■□□□□ 0.9
PSMD4-202ENST00000368884 ABCA5Q8WWZ7 1642 aa20.7■□□□□ 0.9
PSMD4-202ENST00000368884 GRIN2BQ13224 1484 aa20.68■□□□□ 0.9
PSMD4-202ENST00000368884 PBRM1Q86U86 1689 aa20.67■□□□□ 0.9
PSMD4-202ENST00000368884 SNAPC4Q5SXM2 1469 aa20.66■□□□□ 0.9
PSMD4-202ENST00000368884 DNAJC5Q9H3Z4 198 aa20.65■□□□□ 0.9
PSMD4-202ENST00000368884 MAGI1Q96QZ7 1491 aaPredicted RBP20.61■□□□□ 0.89
PSMD4-202ENST00000368884 CHD1O14646 1710 aa20.6■□□□□ 0.89
PSMD4-202ENST00000368884 FBLN2P98095 1184 aa20.59■□□□□ 0.89
PSMD4-202ENST00000368884 OSCARQ8IYS5 282 aa20.58■□□□□ 0.88
PSMD4-202ENST00000368884 TRIM41Q8WV44 630 aa20.58■□□□□ 0.88
PSMD4-202ENST00000368884 ERICH3Q5RHP9 1530 aa20.54■□□□□ 0.88
PSMD4-202ENST00000368884 KIF27Q86VH2 1401 aa20.53■□□□□ 0.88
PSMD4-202ENST00000368884 CHMP7Q8WUX9 453 aaPredicted RBP20.53■□□□□ 0.88
PSMD4-202ENST00000368884 SYNJ2O15056 1496 aa20.53■□□□□ 0.88
PSMD4-202ENST00000368884 ADAMTS12P58397 1594 aa20.51■□□□□ 0.87
PSMD4-202ENST00000368884 FHAD1B1AJZ9 1412 aa20.46■□□□□ 0.87
PSMD4-202ENST00000368884 IGF1RP08069 1367 aa20.43■□□□□ 0.86
PSMD4-202ENST00000368884 GRIN2AQ12879 1464 aa20.42■□□□□ 0.86
PSMD4-202ENST00000368884 RUSC2Q8N2Y8 1516 aa20.4■□□□□ 0.86
PSMD4-202ENST00000368884 CHIC1Q5VXU3 224 aa20.4■□□□□ 0.86
PSMD4-202ENST00000368884 CUL7Q14999 1698 aa20.39■□□□□ 0.85
PSMD4-202ENST00000368884 CLASP1Q7Z460 1538 aa20.35■□□□□ 0.85
PSMD4-202ENST00000368884 CARMIL1Q5VZK9 1371 aa20.33■□□□□ 0.84
PSMD4-202ENST00000368884 CEP170Q5SW79 1584 aa20.32■□□□□ 0.84
PSMD4-202ENST00000368884 NUP160Q12769 1436 aa20.31■□□□□ 0.84
PSMD4-202ENST00000368884 ARHGEF11O15085 1522 aa20.26■□□□□ 0.83
PSMD4-202ENST00000368884 RIMBP3CA6NJZ7 1639 aa20.26■□□□□ 0.83
PSMD4-202ENST00000368884 RIMBP3BA6NNM3 1639 aa20.26■□□□□ 0.83
PSMD4-202ENST00000368884 RIMBP3Q9UFD9 1639 aa20.26■□□□□ 0.83
PSMD4-202ENST00000368884 RAPGEF2Q9Y4G8 1499 aa20.22■□□□□ 0.83
PSMD4-202ENST00000368884 EEA1Q15075 1411 aa20.21■□□□□ 0.83
PSMD4-202ENST00000368884 FAM9AQ8IZU1 332 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms