RNA–Protein interactions for RNA: ENST00000556565.5

TUBB3-212, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 566 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-212ENST00000556565 NISCHQ9Y2I1 1504 aa43.04■■■■■ 4.48
TUBB3-212ENST00000556565 CCDC180Q9P1Z9 1646 aa38.34■■■■□ 3.73
TUBB3-212ENST00000556565 ABCC9O60706 1549 aa37.62■■■■□ 3.61
TUBB3-212ENST00000556565 RB1CC1Q8TDY2 1594 aa36.14■■■■□ 3.38
TUBB3-212ENST00000556565 NACADO15069 1562 aa36.06■■■■□ 3.36
TUBB3-212ENST00000556565 DCAF8L2P0C7V8 631 aa35.93■■■■□ 3.34
TUBB3-212ENST00000556565 ZCCHC6Q5VYS8 1495 aaKnown RBP35.85■■■■□ 3.33
TUBB3-212ENST00000556565 MYO15BQ96JP2 1530 aa35.82■■■■□ 3.32
TUBB3-212ENST00000556565 DCAF1Q9Y4B6 1507 aa35.62■■■■□ 3.29
TUBB3-212ENST00000556565 UNC13AQ9UPW8 1703 aa35.3■■■■□ 3.24
TUBB3-212ENST00000556565 PABPN1Q86U42 306 aaKnown RBP eCLIP35.11■■■■□ 3.21
TUBB3-212ENST00000556565 BICRAQ9NZM4 1560 aa35.06■■■■□ 3.2
TUBB3-212ENST00000556565 SCRIBQ14160 1630 aa34.98■■■■□ 3.19
TUBB3-212ENST00000556565 SHROOM4Q9ULL8 1493 aa34.7■■■■□ 3.15
TUBB3-212ENST00000556565 DNAJC5BQ9UF47 199 aa34.62■■■■□ 3.13
TUBB3-212ENST00000556565 EIF4G1Q04637 1599 aaKnown RBP34.15■■■■□ 3.06
TUBB3-212ENST00000556565 CC2D2AQ9P2K1 1620 aa34.02■■■■□ 3.04
TUBB3-212ENST00000556565 CECR2Q9BXF3 1484 aa33.82■■■■□ 3.01
TUBB3-212ENST00000556565 SMARCA4P51532 1647 aa33.44■■■□□ 2.94
TUBB3-212ENST00000556565 BAZ1AQ9NRL2 1556 aaPredicted RBP33.38■■■□□ 2.93
TUBB3-212ENST00000556565 ATAD2BQ9ULI0 1458 aa33.28■■■□□ 2.92
TUBB3-212ENST00000556565 NCAPD3P42695 1498 aa33.27■■■□□ 2.92
TUBB3-212ENST00000556565 SMARCA2P51531 1590 aa33.23■■■□□ 2.91
TUBB3-212ENST00000556565 MROH2BQ7Z745 1585 aa33.17■■■□□ 2.9
TUBB3-212ENST00000556565 HMGXB3Q12766 1538 aa33.12■■■□□ 2.89
TUBB3-212ENST00000556565 PEG3Q9GZU2 1588 aa33.11■■■□□ 2.89
TUBB3-212ENST00000556565 BAZ1BQ9UIG0 1483 aaKnown RBP33■■■□□ 2.87
TUBB3-212ENST00000556565 WIZO95785 1651 aa32.8■■■□□ 2.84
TUBB3-212ENST00000556565 RSF1Q96T23 1441 aaPredicted RBP32.74■■■□□ 2.83
TUBB3-212ENST00000556565 NESP48681 1621 aa32.52■■■□□ 2.8
TUBB3-212ENST00000556565 TOP2AP11388 1531 aaKnown RBP32.47■■■□□ 2.79
TUBB3-212ENST00000556565 ERCC6Q03468 1493 aa32.44■■■□□ 2.78
TUBB3-212ENST00000556565 LAMC3Q9Y6N6 1575 aa32.42■■■□□ 2.78
TUBB3-212ENST00000556565 CADPSQ9ULU8 1353 aa32.29■■■□□ 2.76
TUBB3-212ENST00000556565 PDS5BQ9NTI5 1447 aa32.19■■■□□ 2.74
TUBB3-212ENST00000556565 CUX2O14529 1486 aa32.16■■■□□ 2.74
TUBB3-212ENST00000556565 KIF21AQ7Z4S6 1674 aa32.13■■■□□ 2.73
TUBB3-212ENST00000556565 CFTRP13569 1480 aa32.09■■■□□ 2.73
TUBB3-212ENST00000556565 THOC2Q8NI27 1593 aaKnown RBP32.08■■■□□ 2.73
TUBB3-212ENST00000556565 CCDC88BA6NC98 1476 aa32.06■■■□□ 2.72
TUBB3-212ENST00000556565 FANCD2Q9BXW9 1451 aa31.94■■■□□ 2.7
TUBB3-212ENST00000556565 CEP164Q9UPV0 1460 aa31.91■■■□□ 2.7
TUBB3-212ENST00000556565 MRC2Q9UBG0 1479 aa31.91■■■□□ 2.7
TUBB3-212ENST00000556565 PRDM2Q13029 1718 aa31.82■■■□□ 2.68
TUBB3-212ENST00000556565 WDR62O43379 1518 aa31.81■■■□□ 2.68
TUBB3-212ENST00000556565 SUPT5HO00267 1087 aaKnown RBP31.76■■■□□ 2.67
TUBB3-212ENST00000556565 URB2Q14146 1524 aaKnown RBP31.64■■■□□ 2.66
TUBB3-212ENST00000556565 TOPBP1Q92547 1522 aa31.41■■■□□ 2.62
TUBB3-212ENST00000556565 ABCC8Q09428 1581 aa31.38■■■□□ 2.61
TUBB3-212ENST00000556565 DNMBPQ6XZF7 1577 aa31.38■■■□□ 2.61
TUBB3-212ENST00000556565 DNAJC5Q9H3Z4 198 aa31.26■■■□□ 2.59
TUBB3-212ENST00000556565 IFT140Q96RY7 1462 aa31.25■■■□□ 2.59
TUBB3-212ENST00000556565 POLA1P09884 1462 aaPredicted RBP31.14■■■□□ 2.58
TUBB3-212ENST00000556565 CUX1P39880 1505 aa31.14■■■□□ 2.57
TUBB3-212ENST00000556565 ZNF608Q9ULD9 1512 aaPredicted RBP31.12■■■□□ 2.57
TUBB3-212ENST00000556565 TARBP1Q13395 1621 aaKnown RBP31.09■■■□□ 2.57
TUBB3-212ENST00000556565 FGD5Q6ZNL6 1462 aa31.05■■■□□ 2.56
TUBB3-212ENST00000556565 EIF4G3O43432 1585 aaKnown RBP31.01■■■□□ 2.56
TUBB3-212ENST00000556565 RAD54L2Q9Y4B4 1467 aa31■■■□□ 2.55
TUBB3-212ENST00000556565 SOGA1O94964 1423 aa30.98■■■□□ 2.55
TUBB3-212ENST00000556565 AQRO60306 1485 aaKnown RBP eCLIP30.91■■■□□ 2.54
TUBB3-212ENST00000556565 WRNQ14191 1432 aaPredicted RBP eCLIP30.88■■■□□ 2.53
TUBB3-212ENST00000556565 WDR97A6NE52 1622 aa30.84■■■□□ 2.53
TUBB3-212ENST00000556565 TDRD9Q8NDG6 1382 aaKnown RBP30.83■■■□□ 2.53
TUBB3-212ENST00000556565 TOP2BQ02880 1626 aa30.83■■■□□ 2.53
TUBB3-212ENST00000556565 BIVM-ERCC5R4GMW8 1640 aa30.83■■■□□ 2.53
TUBB3-212ENST00000556565 SYNJ1O43426 1573 aa30.83■■■□□ 2.53
TUBB3-212ENST00000556565 ABCA10Q8WWZ4 1543 aa30.74■■■□□ 2.51
TUBB3-212ENST00000556565 OSCARQ8IYS5 282 aa30.74■■■□□ 2.51
TUBB3-212ENST00000556565 GRIN2BQ13224 1484 aa30.66■■■□□ 2.5
TUBB3-212ENST00000556565 SNAPC4Q5SXM2 1469 aa30.65■■■□□ 2.5
TUBB3-212ENST00000556565 ABCA5Q8WWZ7 1642 aa30.65■■■□□ 2.5
TUBB3-212ENST00000556565 GAPVD1Q14C86 1478 aa30.64■■■□□ 2.5
TUBB3-212ENST00000556565 CHD1O14646 1710 aa30.62■■■□□ 2.49
TUBB3-212ENST00000556565 MAGI1Q96QZ7 1491 aaPredicted RBP30.6■■■□□ 2.49
TUBB3-212ENST00000556565 PBRM1Q86U86 1689 aa30.59■■■□□ 2.49
TUBB3-212ENST00000556565 FBLN2P98095 1184 aa30.53■■■□□ 2.48
TUBB3-212ENST00000556565 SYNJ2O15056 1496 aa30.48■■■□□ 2.47
TUBB3-212ENST00000556565 CHMP7Q8WUX9 453 aaPredicted RBP30.43■■■□□ 2.46
TUBB3-212ENST00000556565 ADAMTS12P58397 1594 aa30.38■■■□□ 2.45
TUBB3-212ENST00000556565 ERICH3Q5RHP9 1530 aa30.37■■■□□ 2.45
TUBB3-212ENST00000556565 RIMBP3CA6NJZ7 1639 aa30.32■■■□□ 2.44
TUBB3-212ENST00000556565 RIMBP3BA6NNM3 1639 aa30.32■■■□□ 2.44
TUBB3-212ENST00000556565 RIMBP3Q9UFD9 1639 aa30.32■■■□□ 2.44
TUBB3-212ENST00000556565 CLASP1Q7Z460 1538 aa30.32■■■□□ 2.44
TUBB3-212ENST00000556565 ARHGEF11O15085 1522 aa30.3■■■□□ 2.44
TUBB3-212ENST00000556565 FHAD1B1AJZ9 1412 aa30.29■■■□□ 2.44
TUBB3-212ENST00000556565 GRIN2AQ12879 1464 aa30.27■■■□□ 2.44
TUBB3-212ENST00000556565 KIF27Q86VH2 1401 aa30.23■■■□□ 2.43
TUBB3-212ENST00000556565 TRIM41Q8WV44 630 aa30.19■■■□□ 2.42
TUBB3-212ENST00000556565 NUP160Q12769 1436 aa30.15■■■□□ 2.42
TUBB3-212ENST00000556565 CEP170Q5SW79 1584 aa30.14■■■□□ 2.42
TUBB3-212ENST00000556565 IGF1RP08069 1367 aa30.11■■■□□ 2.41
TUBB3-212ENST00000556565 CUL7Q14999 1698 aa30.07■■■□□ 2.41
TUBB3-212ENST00000556565 ARAP1Q96P48 1450 aa30.06■■■□□ 2.4
TUBB3-212ENST00000556565 CYB5RLQ6IPT4 315 aa29.96■■■□□ 2.39
TUBB3-212ENST00000556565 SHROOM2Q13796 1616 aa29.93■■■□□ 2.38
TUBB3-212ENST00000556565 CARMIL1Q5VZK9 1371 aa29.93■■■□□ 2.38
TUBB3-212ENST00000556565 RUSC2Q8N2Y8 1516 aa29.93■■■□□ 2.38
TUBB3-212ENST00000556565 ERCC6L2Q5T890 1561 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms