RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-210ENST00000513582 NISCHQ9Y2I1 1504 aa20.63■□□□□ 0.89
PDCD6-210ENST00000513582 HRCP23327 699 aa18.9■□□□□ 0.62
PDCD6-210ENST00000513582 DCAF8L2P0C7V8 631 aa18.88■□□□□ 0.61
PDCD6-210ENST00000513582 SHROOM4Q9ULL8 1493 aa18.78■□□□□ 0.6
PDCD6-210ENST00000513582 PPARGC1BQ86YN6 1023 aaKnown RBP18.7■□□□□ 0.58
PDCD6-210ENST00000513582 SUPT5HO00267 1087 aaKnown RBP18.69■□□□□ 0.58
PDCD6-210ENST00000513582 PELP1Q8IZL8 1130 aaKnown RBP18.63■□□□□ 0.57
PDCD6-210ENST00000513582 PCGF6Q9BYE7 350 aa18.53■□□□□ 0.56
PDCD6-210ENST00000513582 SCAF1Q9H7N4 1312 aaKnown RBP18.14■□□□□ 0.5
PDCD6-210ENST00000513582 MYO15BQ96JP2 1530 aa18.04■□□□□ 0.48
PDCD6-210ENST00000513582 EHMT2Q96KQ7 1210 aa17.96■□□□□ 0.47
PDCD6-210ENST00000513582 MYT1Q01538 1121 aa17.95■□□□□ 0.46
PDCD6-210ENST00000513582 CHIC1Q5VXU3 224 aa17.87■□□□□ 0.45
PDCD6-210ENST00000513582 TRIM26Q12899 539 aaPredicted RBP17.67■□□□□ 0.42
PDCD6-210ENST00000513582 LOC105371045A0A1W2PR82 267 aa17.66■□□□□ 0.42
PDCD6-210ENST00000513582 DCAF1Q9Y4B6 1507 aa17.58■□□□□ 0.4
PDCD6-210ENST00000513582 ZEB1P37275 1124 aaPredicted RBP17.56■□□□□ 0.4
PDCD6-210ENST00000513582 NEUROD1Q13562 356 aa17.55■□□□□ 0.4
PDCD6-210ENST00000513582 ACIN1Q9UKV3 1341 aaKnown RBP17.55■□□□□ 0.4
PDCD6-210ENST00000513582 FAM9AQ8IZU1 332 aaPredicted RBP17.54■□□□□ 0.4
PDCD6-210ENST00000513582 GTF3C3Q9Y5Q9 886 aa17.52■□□□□ 0.4
PDCD6-210ENST00000513582 ZCCHC6Q5VYS8 1495 aaKnown RBP17.44■□□□□ 0.38
PDCD6-210ENST00000513582 CCDC180Q9P1Z9 1646 aa17.4■□□□□ 0.38
PDCD6-210ENST00000513582 TTBK1Q5TCY1 1321 aaPredicted RBP17.31■□□□□ 0.36
PDCD6-210ENST00000513582 CENPBP07199 599 aaPredicted RBP17.3■□□□□ 0.36
PDCD6-210ENST00000513582 DIEXFQ68CQ4 756 aaKnown RBP17.13■□□□□ 0.33
PDCD6-210ENST00000513582 YTHDC1Q96MU7 727 aaKnown RBP17.08■□□□□ 0.32
PDCD6-210ENST00000513582 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.06■□□□□ 0.32
PDCD6-210ENST00000513582 CCER1Q8TC90 406 aaPredicted RBP17.01■□□□□ 0.31
PDCD6-210ENST00000513582 TRIM41Q8WV44 630 aa17.01■□□□□ 0.31
PDCD6-210ENST00000513582 BCL11AQ9H165 835 aa16.97■□□□□ 0.31
PDCD6-210ENST00000513582 RANGAP1P46060 587 aaPredicted RBP16.82■□□□□ 0.28
PDCD6-210ENST00000513582 ANP32EQ9BTT0 268 aa16.72■□□□□ 0.27
PDCD6-210ENST00000513582 MIER1Q8N108 512 aa16.67■□□□□ 0.26
PDCD6-210ENST00000513582 ZNF316A6NFI3 1004 aaPredicted RBP16.65■□□□□ 0.26
PDCD6-210ENST00000513582 CSRNP3Q8WYN3 585 aa16.63■□□□□ 0.25
PDCD6-210ENST00000513582 ABCC9O60706 1549 aa16.6■□□□□ 0.25
PDCD6-210ENST00000513582 TSHZ2Q9NRE2 1034 aa16.54■□□□□ 0.24
PDCD6-210ENST00000513582 SUPT16HQ9Y5B9 1047 aaKnown RBP16.52■□□□□ 0.24
PDCD6-210ENST00000513582 PRKCSHP14314 528 aaPredicted RBP16.49■□□□□ 0.23
PDCD6-210ENST00000513582 UBTFP17480 764 aaKnown RBP16.49■□□□□ 0.23
PDCD6-210ENST00000513582 SCRIBQ14160 1630 aa16.43■□□□□ 0.22
PDCD6-210ENST00000513582 PABPN1Q86U42 306 aaKnown RBP eCLIP16.43■□□□□ 0.22
PDCD6-210ENST00000513582 RSF1Q96T23 1441 aaPredicted RBP16.4■□□□□ 0.22
PDCD6-210ENST00000513582 BCANQ96GW7 911 aa16.33■□□□□ 0.21
PDCD6-210ENST00000513582 HNRNPUL2Q1KMD3 747 aaKnown RBP16.32■□□□□ 0.2
PDCD6-210ENST00000513582 CLSPNQ9HAW4 1339 aa16.25■□□□□ 0.19
PDCD6-210ENST00000513582 APLP2Q06481 763 aa16.24■□□□□ 0.19
PDCD6-210ENST00000513582 RB1CC1Q8TDY2 1594 aa16.23■□□□□ 0.19
PDCD6-210ENST00000513582 NACADO15069 1562 aa16.16■□□□□ 0.18
PDCD6-210ENST00000513582 ITGAEP38570 1179 aa16.15■□□□□ 0.18
PDCD6-210ENST00000513582 RBM19Q9Y4C8 960 aaKnown RBP16.14■□□□□ 0.17
PDCD6-210ENST00000513582 FKBP8Q14318 412 aa16.1■□□□□ 0.17
PDCD6-210ENST00000513582 ATP1B4Q9UN42 357 aaPredicted RBP16.08■□□□□ 0.16
PDCD6-210ENST00000513582 CECR2Q9BXF3 1484 aa16.08■□□□□ 0.16
PDCD6-210ENST00000513582 MROH2BQ7Z745 1585 aa16.03■□□□□ 0.16
PDCD6-210ENST00000513582 MSH5O43196 834 aa16.02■□□□□ 0.16
PDCD6-210ENST00000513582 KCNH8Q96L42 1107 aa16.02■□□□□ 0.16
PDCD6-210ENST00000513582 ERICH6Q7L0X2 663 aa16.02■□□□□ 0.15
PDCD6-210ENST00000513582 ANO8Q9HCE9 1232 aaPredicted RBP15.96■□□□□ 0.15
PDCD6-210ENST00000513582 CEP162Q5TB80 1403 aa15.94■□□□□ 0.14
PDCD6-210ENST00000513582 WRNQ14191 1432 aaPredicted RBP eCLIP15.93■□□□□ 0.145e-6■■■■■ 33.4
PDCD6-210ENST00000513582 WIZO95785 1651 aa15.92■□□□□ 0.14
PDCD6-210ENST00000513582 NEFLP07196 543 aa15.92■□□□□ 0.14
PDCD6-210ENST00000513582 BAZ1AQ9NRL2 1556 aaPredicted RBP15.88■□□□□ 0.13
PDCD6-210ENST00000513582 DEKP35659 375 aaKnown RBP15.87■□□□□ 0.13
PDCD6-210ENST00000513582 TRIM52Q96A61 297 aa15.78■□□□□ 0.12
PDCD6-210ENST00000513582 CCDC136Q96JN2 1154 aa15.77■□□□□ 0.11
PDCD6-210ENST00000513582 SALL2Q9Y467 1007 aaPredicted RBP15.76■□□□□ 0.11
PDCD6-210ENST00000513582 NBR1Q14596 966 aa15.73■□□□□ 0.11
PDCD6-210ENST00000513582 FANCIQ9NVI1 1328 aa15.72■□□□□ 0.11
PDCD6-210ENST00000513582 CNGB1Q14028 1251 aaPredicted RBP15.72■□□□□ 0.11
PDCD6-210ENST00000513582 TOP2AP11388 1531 aaKnown RBP15.72■□□□□ 0.11
PDCD6-210ENST00000513582 TNIKQ9UKE5 1360 aa15.72■□□□□ 0.11
PDCD6-210ENST00000513582 IRX6P78412 446 aaPredicted RBP15.71■□□□□ 0.11
PDCD6-210ENST00000513582 CDK11AQ9UQ88 783 aaPredicted RBP15.71■□□□□ 0.1
PDCD6-210ENST00000513582 P3H3Q8IVL6 736 aa15.69■□□□□ 0.1
PDCD6-210ENST00000513582 CCDC88BA6NC98 1476 aa15.68■□□□□ 0.1
PDCD6-210ENST00000513582 DDX10Q13206 875 aaKnown RBP15.68■□□□□ 0.1
PDCD6-210ENST00000513582 SOGA1O94964 1423 aa15.68■□□□□ 0.1
PDCD6-210ENST00000513582 MYT1LQ9UL68 1186 aa15.67■□□□□ 0.1
PDCD6-210ENST00000513582 ABCC8Q09428 1581 aa15.67■□□□□ 0.1
PDCD6-210ENST00000513582 SMARCA4P51532 1647 aa15.65■□□□□ 0.1
PDCD6-210ENST00000513582 RTN4Q9NQC3 1192 aaKnown RBP15.65■□□□□ 0.1
PDCD6-210ENST00000513582 DHX57Q6P158 1386 aaKnown RBP15.64■□□□□ 0.09
PDCD6-210ENST00000513582 EEA1Q15075 1411 aa15.64■□□□□ 0.09
PDCD6-210ENST00000513582 EIF4G1Q04637 1599 aaKnown RBP15.63■□□□□ 0.09
PDCD6-210ENST00000513582 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.63■□□□□ 0.09
PDCD6-210ENST00000513582 SMARCA2P51531 1590 aa15.59■□□□□ 0.09
PDCD6-210ENST00000513582 FAM50AQ14320 339 aaKnown RBP15.59■□□□□ 0.09
PDCD6-210ENST00000513582 HIRIP3Q9BW71 556 aaPredicted RBP15.59■□□□□ 0.09
PDCD6-210ENST00000513582 IL27Q8NEV9 243 aa15.56■□□□□ 0.08
PDCD6-210ENST00000513582 RUSC2Q8N2Y8 1516 aa15.55■□□□□ 0.08
PDCD6-210ENST00000513582 ARID3CA6NKF2 412 aa15.53■□□□□ 0.08
PDCD6-210ENST00000513582 GOLGA3Q08378 1498 aa15.52■□□□□ 0.08
PDCD6-210ENST00000513582 PAK3O75914 559 aaPredicted RBP15.51■□□□□ 0.07
PDCD6-210ENST00000513582 NOP58Q9Y2X3 529 aaKnown RBP15.51■□□□□ 0.07
PDCD6-210ENST00000513582 ERICH6BQ5W0A0 696 aa15.49■□□□□ 0.07
PDCD6-210ENST00000513582 ANP32CO43423 234 aa15.47■□□□□ 0.07
PDCD6-210ENST00000513582 RTL5Q5HYW3 569 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms