RNA–Protein interactions for RNA: ENST00000618970.4

PDCD6-213, Transcript of programmed cell death 6, humanhuman

TSL 3 BASIC

Gene PDCD6, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-213ENST00000618970 NISCHQ9Y2I1 1504 aa32.39■■■□□ 2.78
PDCD6-213ENST00000618970 ABCC9O60706 1549 aa29.11■■■□□ 2.25
PDCD6-213ENST00000618970 CCDC180Q9P1Z9 1646 aa29.1■■■□□ 2.25
PDCD6-213ENST00000618970 RB1CC1Q8TDY2 1594 aa27.68■■■□□ 2.02
PDCD6-213ENST00000618970 NACADO15069 1562 aa27.48■■□□□ 1.99
PDCD6-213ENST00000618970 DNAJC5BQ9UF47 199 aa27.32■■□□□ 1.96
PDCD6-213ENST00000618970 DCAF8L2P0C7V8 631 aa27.27■■□□□ 1.96
PDCD6-213ENST00000618970 UNC13AQ9UPW8 1703 aa27.14■■□□□ 1.94
PDCD6-213ENST00000618970 MYO15BQ96JP2 1530 aa27.08■■□□□ 1.93
PDCD6-213ENST00000618970 PABPN1Q86U42 306 aaKnown RBP eCLIP27.07■■□□□ 1.92
PDCD6-213ENST00000618970 BICRAQ9NZM4 1560 aa26.93■■□□□ 1.9
PDCD6-213ENST00000618970 ZCCHC6Q5VYS8 1495 aaKnown RBP26.87■■□□□ 1.89
PDCD6-213ENST00000618970 DCAF1Q9Y4B6 1507 aa26.74■■□□□ 1.87
PDCD6-213ENST00000618970 SCRIBQ14160 1630 aa26.54■■□□□ 1.84
PDCD6-213ENST00000618970 SHROOM4Q9ULL8 1493 aa26.49■■□□□ 1.83
PDCD6-213ENST00000618970 CC2D2AQ9P2K1 1620 aa26.31■■□□□ 1.8
PDCD6-213ENST00000618970 EIF4G1Q04637 1599 aaKnown RBP26.24■■□□□ 1.79
PDCD6-213ENST00000618970 CECR2Q9BXF3 1484 aa26.21■■□□□ 1.79
PDCD6-213ENST00000618970 AEBP2Q6ZN18 517 aaPredicted RBP25.81■■□□□ 1.72
PDCD6-213ENST00000618970 NCAPD3P42695 1498 aa25.35■■□□□ 1.65
PDCD6-213ENST00000618970 SMARCA4P51532 1647 aa25.3■■□□□ 1.64
PDCD6-213ENST00000618970 ATAD2BQ9ULI0 1458 aa25.3■■□□□ 1.64
PDCD6-213ENST00000618970 SMARCA2P51531 1590 aa25.22■■□□□ 1.63
PDCD6-213ENST00000618970 HMGXB3Q12766 1538 aa25.2■■□□□ 1.62
PDCD6-213ENST00000618970 BAZ1AQ9NRL2 1556 aaPredicted RBP25.14■■□□□ 1.61
PDCD6-213ENST00000618970 ERCC6Q03468 1493 aa25.1■■□□□ 1.61
PDCD6-213ENST00000618970 CUX2O14529 1486 aa25.07■■□□□ 1.6
PDCD6-213ENST00000618970 BAZ1BQ9UIG0 1483 aaKnown RBP25.05■■□□□ 1.6
PDCD6-213ENST00000618970 DNAJC5Q9H3Z4 198 aa25.04■■□□□ 1.6
PDCD6-213ENST00000618970 PEG3Q9GZU2 1588 aa25.04■■□□□ 1.6
PDCD6-213ENST00000618970 NESP48681 1621 aa25.02■■□□□ 1.6
PDCD6-213ENST00000618970 MROH2BQ7Z745 1585 aa24.98■■□□□ 1.59
PDCD6-213ENST00000618970 LAMC3Q9Y6N6 1575 aa24.81■■□□□ 1.56
PDCD6-213ENST00000618970 THOC2Q8NI27 1593 aaKnown RBP24.8■■□□□ 1.56
PDCD6-213ENST00000618970 KIF21AQ7Z4S6 1674 aa24.72■■□□□ 1.55
PDCD6-213ENST00000618970 WIZO95785 1651 aa24.7■■□□□ 1.54
PDCD6-213ENST00000618970 PDS5BQ9NTI5 1447 aa24.62■■□□□ 1.53
PDCD6-213ENST00000618970 RSF1Q96T23 1441 aaPredicted RBP24.61■■□□□ 1.53
PDCD6-213ENST00000618970 CADPSQ9ULU8 1353 aa24.57■■□□□ 1.52
PDCD6-213ENST00000618970 MRC2Q9UBG0 1479 aa24.45■■□□□ 1.51
PDCD6-213ENST00000618970 WDR62O43379 1518 aa24.42■■□□□ 1.5
PDCD6-213ENST00000618970 TOP2AP11388 1531 aaKnown RBP24.36■■□□□ 1.49
PDCD6-213ENST00000618970 CEP164Q9UPV0 1460 aa24.35■■□□□ 1.49
PDCD6-213ENST00000618970 FANCD2Q9BXW9 1451 aa24.32■■□□□ 1.48
PDCD6-213ENST00000618970 CFTRP13569 1480 aa24.32■■□□□ 1.48
PDCD6-213ENST00000618970 SUPT5HO00267 1087 aaKnown RBP24.16■■□□□ 1.46
PDCD6-213ENST00000618970 URB2Q14146 1524 aaKnown RBP24.15■■□□□ 1.46
PDCD6-213ENST00000618970 PRDM2Q13029 1718 aa24.13■■□□□ 1.45
PDCD6-213ENST00000618970 CCDC88BA6NC98 1476 aa24.07■■□□□ 1.44
PDCD6-213ENST00000618970 CHIC1Q5VXU3 224 aa24.02■■□□□ 1.44
PDCD6-213ENST00000618970 TRIM41Q8WV44 630 aa23.95■■□□□ 1.42
PDCD6-213ENST00000618970 TOPBP1Q92547 1522 aa23.88■■□□□ 1.41
PDCD6-213ENST00000618970 ZNF608Q9ULD9 1512 aaPredicted RBP23.86■■□□□ 1.41
PDCD6-213ENST00000618970 OSCARQ8IYS5 282 aa23.86■■□□□ 1.41
PDCD6-213ENST00000618970 IFT140Q96RY7 1462 aa23.85■■□□□ 1.41
PDCD6-213ENST00000618970 DNMBPQ6XZF7 1577 aa23.79■■□□□ 1.4
PDCD6-213ENST00000618970 ABCC8Q09428 1581 aa23.76■■□□□ 1.39
PDCD6-213ENST00000618970 EIF4G3O43432 1585 aaKnown RBP23.75■■□□□ 1.39
PDCD6-213ENST00000618970 TARBP1Q13395 1621 aaKnown RBP23.7■■□□□ 1.38
PDCD6-213ENST00000618970 RIMBP3CA6NJZ7 1639 aa23.66■■□□□ 1.38
PDCD6-213ENST00000618970 RIMBP3BA6NNM3 1639 aa23.66■■□□□ 1.38
PDCD6-213ENST00000618970 RIMBP3Q9UFD9 1639 aa23.66■■□□□ 1.38
PDCD6-213ENST00000618970 POLA1P09884 1462 aaPredicted RBP23.63■■□□□ 1.37
PDCD6-213ENST00000618970 AQRO60306 1485 aaKnown RBP eCLIP23.62■■□□□ 1.371e-6■■■■□ 25.2
PDCD6-213ENST00000618970 CHD1O14646 1710 aa23.59■■□□□ 1.37
PDCD6-213ENST00000618970 ARHGEF11O15085 1522 aa23.57■■□□□ 1.36
PDCD6-213ENST00000618970 RAD54L2Q9Y4B4 1467 aa23.55■■□□□ 1.36
PDCD6-213ENST00000618970 SOGA1O94964 1423 aa23.49■■□□□ 1.35
PDCD6-213ENST00000618970 FGD5Q6ZNL6 1462 aa23.49■■□□□ 1.35
PDCD6-213ENST00000618970 CUX1P39880 1505 aa23.48■■□□□ 1.35
PDCD6-213ENST00000618970 TDRD9Q8NDG6 1382 aaKnown RBP23.45■■□□□ 1.34
PDCD6-213ENST00000618970 FBLN2P98095 1184 aa23.41■■□□□ 1.34
PDCD6-213ENST00000618970 WDR97A6NE52 1622 aa23.41■■□□□ 1.34
PDCD6-213ENST00000618970 SNAPC4Q5SXM2 1469 aa23.39■■□□□ 1.34
PDCD6-213ENST00000618970 ARAP1Q96P48 1450 aa23.35■■□□□ 1.33
PDCD6-213ENST00000618970 CYB5RLQ6IPT4 315 aa23.33■■□□□ 1.33
PDCD6-213ENST00000618970 MAGI1Q96QZ7 1491 aaPredicted RBP23.3■■□□□ 1.32
PDCD6-213ENST00000618970 GRIN2BQ13224 1484 aa23.3■■□□□ 1.32
PDCD6-213ENST00000618970 CLASP1Q7Z460 1538 aa23.29■■□□□ 1.32
PDCD6-213ENST00000618970 PBRM1Q86U86 1689 aa23.27■■□□□ 1.32
PDCD6-213ENST00000618970 SYNJ1O43426 1573 aa23.24■■□□□ 1.31
PDCD6-213ENST00000618970 SYNJ2O15056 1496 aa23.23■■□□□ 1.31
PDCD6-213ENST00000618970 CHMP7Q8WUX9 453 aaPredicted RBP23.22■■□□□ 1.31
PDCD6-213ENST00000618970 GAPVD1Q14C86 1478 aa23.21■■□□□ 1.31
PDCD6-213ENST00000618970 ABCA5Q8WWZ7 1642 aa23.21■■□□□ 1.31
PDCD6-213ENST00000618970 ABCA10Q8WWZ4 1543 aa23.2■■□□□ 1.3
PDCD6-213ENST00000618970 WRNQ14191 1432 aaPredicted RBP eCLIP23.14■■□□□ 1.295e-6■■■■■ 33.4
PDCD6-213ENST00000618970 BIVM-ERCC5R4GMW8 1640 aa23.12■■□□□ 1.29
PDCD6-213ENST00000618970 TOP2BQ02880 1626 aa23.1■■□□□ 1.29
PDCD6-213ENST00000618970 TRHP20396 242 aaPredicted RBP23.06■■□□□ 1.28
PDCD6-213ENST00000618970 ADAMTS12P58397 1594 aa23.04■■□□□ 1.28
PDCD6-213ENST00000618970 GRIN2AQ12879 1464 aa23.01■■□□□ 1.27
PDCD6-213ENST00000618970 CEP170Q5SW79 1584 aa22.97■■□□□ 1.27
PDCD6-213ENST00000618970 ERCC6L2Q5T890 1561 aa22.96■■□□□ 1.27
PDCD6-213ENST00000618970 NUP160Q12769 1436 aa22.93■■□□□ 1.26
PDCD6-213ENST00000618970 ERICH3Q5RHP9 1530 aa22.91■■□□□ 1.26
PDCD6-213ENST00000618970 FHAD1B1AJZ9 1412 aa22.91■■□□□ 1.26
PDCD6-213ENST00000618970 SHROOM2Q13796 1616 aa22.87■■□□□ 1.25
PDCD6-213ENST00000618970 RUSC2Q8N2Y8 1516 aa22.72■■□□□ 1.23
PDCD6-213ENST00000618970 PRG4Q92954 1404 aaPredicted RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms