RNA–Protein interactions for RNA: ENST00000507473.1

PDCD6-205, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 486 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-205ENST00000507473 NISCHQ9Y2I1 1504 aa17.69■□□□□ 0.42
PDCD6-205ENST00000507473 CCDC180Q9P1Z9 1646 aa15.38■□□□□ 0.05
PDCD6-205ENST00000507473 ZCCHC6Q5VYS8 1495 aaKnown RBP14.84□□□□□ -0.03
PDCD6-205ENST00000507473 DCAF1Q9Y4B6 1507 aa14.62□□□□□ -0.07
PDCD6-205ENST00000507473 DCAF8L2P0C7V8 631 aa14.58□□□□□ -0.08
PDCD6-205ENST00000507473 ABCC9O60706 1549 aa14.57□□□□□ -0.08
PDCD6-205ENST00000507473 MYO15BQ96JP2 1530 aa14.45□□□□□ -0.1
PDCD6-205ENST00000507473 SHROOM4Q9ULL8 1493 aa14.4□□□□□ -0.1
PDCD6-205ENST00000507473 NACADO15069 1562 aa14.34□□□□□ -0.11
PDCD6-205ENST00000507473 RB1CC1Q8TDY2 1594 aa14.21□□□□□ -0.14
PDCD6-205ENST00000507473 SCRIBQ14160 1630 aa14.15□□□□□ -0.14
PDCD6-205ENST00000507473 UNC13AQ9UPW8 1703 aa13.93□□□□□ -0.18
PDCD6-205ENST00000507473 SUPT5HO00267 1087 aaKnown RBP13.86□□□□□ -0.19
PDCD6-205ENST00000507473 BICRAQ9NZM4 1560 aa13.84□□□□□ -0.19
PDCD6-205ENST00000507473 PABPN1Q86U42 306 aaKnown RBP eCLIP13.77□□□□□ -0.21
PDCD6-205ENST00000507473 CECR2Q9BXF3 1484 aa13.77□□□□□ -0.21
PDCD6-205ENST00000507473 RSF1Q96T23 1441 aaPredicted RBP13.73□□□□□ -0.21
PDCD6-205ENST00000507473 MROH2BQ7Z745 1585 aa13.67□□□□□ -0.22
PDCD6-205ENST00000507473 BAZ1AQ9NRL2 1556 aaPredicted RBP13.62□□□□□ -0.23
PDCD6-205ENST00000507473 SMARCA4P51532 1647 aa13.57□□□□□ -0.24
PDCD6-205ENST00000507473 WIZO95785 1651 aa13.54□□□□□ -0.24
PDCD6-205ENST00000507473 PEG3Q9GZU2 1588 aa13.42□□□□□ -0.26
PDCD6-205ENST00000507473 TOP2AP11388 1531 aaKnown RBP13.39□□□□□ -0.27
PDCD6-205ENST00000507473 ATAD2BQ9ULI0 1458 aa13.38□□□□□ -0.27
PDCD6-205ENST00000507473 EIF4G1Q04637 1599 aaKnown RBP13.37□□□□□ -0.27
PDCD6-205ENST00000507473 SMARCA2P51531 1590 aa13.33□□□□□ -0.28
PDCD6-205ENST00000507473 CHIC1Q5VXU3 224 aa13.33□□□□□ -0.28
PDCD6-205ENST00000507473 CCDC88BA6NC98 1476 aa13.29□□□□□ -0.28
PDCD6-205ENST00000507473 NCAPD3P42695 1498 aa13.28□□□□□ -0.28
PDCD6-205ENST00000507473 BAZ1BQ9UIG0 1483 aaKnown RBP13.26□□□□□ -0.29
PDCD6-205ENST00000507473 HMGXB3Q12766 1538 aa13.21□□□□□ -0.29
PDCD6-205ENST00000507473 CC2D2AQ9P2K1 1620 aa13.18□□□□□ -0.3
PDCD6-205ENST00000507473 TRIM41Q8WV44 630 aa13.03□□□□□ -0.32
PDCD6-205ENST00000507473 ABCC8Q09428 1581 aa12.98□□□□□ -0.33
PDCD6-205ENST00000507473 CFTRP13569 1480 aa12.97□□□□□ -0.33
PDCD6-205ENST00000507473 DNAJC5BQ9UF47 199 aa12.96□□□□□ -0.33
PDCD6-205ENST00000507473 CADPSQ9ULU8 1353 aa12.93□□□□□ -0.34
PDCD6-205ENST00000507473 WRNQ14191 1432 aaPredicted RBP eCLIP12.88□□□□□ -0.355e-6■■■■■ 33.4
PDCD6-205ENST00000507473 SYNJ1O43426 1573 aa12.85□□□□□ -0.35
PDCD6-205ENST00000507473 PRDM2Q13029 1718 aa12.84□□□□□ -0.35
PDCD6-205ENST00000507473 LOC105371045A0A1W2PR82 267 aa12.82□□□□□ -0.36
PDCD6-205ENST00000507473 NESP48681 1621 aa12.81□□□□□ -0.36
PDCD6-205ENST00000507473 FAM9AQ8IZU1 332 aaPredicted RBP12.79□□□□□ -0.36
PDCD6-205ENST00000507473 TOP2BQ02880 1626 aa12.79□□□□□ -0.36
PDCD6-205ENST00000507473 CUX1P39880 1505 aa12.78□□□□□ -0.36
PDCD6-205ENST00000507473 LAMC3Q9Y6N6 1575 aa12.77□□□□□ -0.36
PDCD6-205ENST00000507473 BIVM-ERCC5R4GMW8 1640 aa12.77□□□□□ -0.36
PDCD6-205ENST00000507473 SOGA1O94964 1423 aa12.77□□□□□ -0.37
PDCD6-205ENST00000507473 FANCD2Q9BXW9 1451 aa12.76□□□□□ -0.37
PDCD6-205ENST00000507473 RUSC2Q8N2Y8 1516 aa12.73□□□□□ -0.37
PDCD6-205ENST00000507473 EEA1Q15075 1411 aa12.69□□□□□ -0.38
PDCD6-205ENST00000507473 PDS5BQ9NTI5 1447 aa12.69□□□□□ -0.38
PDCD6-205ENST00000507473 CSRNP3Q8WYN3 585 aa12.67□□□□□ -0.38
PDCD6-205ENST00000507473 CEP164Q9UPV0 1460 aa12.65□□□□□ -0.38
PDCD6-205ENST00000507473 DNMBPQ6XZF7 1577 aa12.64□□□□□ -0.39
PDCD6-205ENST00000507473 TOPBP1Q92547 1522 aa12.63□□□□□ -0.39
PDCD6-205ENST00000507473 URB2Q14146 1524 aaKnown RBP12.62□□□□□ -0.39
PDCD6-205ENST00000507473 KIF21AQ7Z4S6 1674 aa12.62□□□□□ -0.39
PDCD6-205ENST00000507473 FGD5Q6ZNL6 1462 aa12.61□□□□□ -0.39
PDCD6-205ENST00000507473 EHMT2Q96KQ7 1210 aa12.6□□□□□ -0.39
PDCD6-205ENST00000507473 POLA1P09884 1462 aaPredicted RBP12.56□□□□□ -0.4
PDCD6-205ENST00000507473 KIF27Q86VH2 1401 aa12.55□□□□□ -0.4
PDCD6-205ENST00000507473 RAD54L2Q9Y4B4 1467 aa12.54□□□□□ -0.4
PDCD6-205ENST00000507473 CUX2O14529 1486 aa12.53□□□□□ -0.4
PDCD6-205ENST00000507473 KIF21BO75037 1637 aa12.53□□□□□ -0.4
PDCD6-205ENST00000507473 MRC2Q9UBG0 1479 aa12.53□□□□□ -0.4
PDCD6-205ENST00000507473 IGF1RP08069 1367 aa12.52□□□□□ -0.41
PDCD6-205ENST00000507473 TNIKQ9UKE5 1360 aa12.52□□□□□ -0.41
PDCD6-205ENST00000507473 GOLGA3Q08378 1498 aa12.52□□□□□ -0.41
PDCD6-205ENST00000507473 ABCA10Q8WWZ4 1543 aa12.52□□□□□ -0.41
PDCD6-205ENST00000507473 PRXQ9BXM0 1461 aa12.51□□□□□ -0.41
PDCD6-205ENST00000507473 RAPGEF2Q9Y4G8 1499 aa12.48□□□□□ -0.41
PDCD6-205ENST00000507473 UBTFP17480 764 aaKnown RBP12.46□□□□□ -0.41
PDCD6-205ENST00000507473 WDR97A6NE52 1622 aa12.46□□□□□ -0.41
PDCD6-205ENST00000507473 TARBP1Q13395 1621 aaKnown RBP12.46□□□□□ -0.41
PDCD6-205ENST00000507473 WDR62O43379 1518 aa12.46□□□□□ -0.42
PDCD6-205ENST00000507473 ERCC6Q03468 1493 aa12.45□□□□□ -0.42
PDCD6-205ENST00000507473 ERICH3Q5RHP9 1530 aa12.44□□□□□ -0.42
PDCD6-205ENST00000507473 SLC24A1O60721 1099 aa12.43□□□□□ -0.42
PDCD6-205ENST00000507473 THOC2Q8NI27 1593 aaKnown RBP12.43□□□□□ -0.42
PDCD6-205ENST00000507473 CEP162Q5TB80 1403 aa12.42□□□□□ -0.42
PDCD6-205ENST00000507473 CARMIL1Q5VZK9 1371 aa12.42□□□□□ -0.42
PDCD6-205ENST00000507473 TDRD9Q8NDG6 1382 aaKnown RBP12.42□□□□□ -0.42
PDCD6-205ENST00000507473 ABCA5Q8WWZ7 1642 aa12.4□□□□□ -0.42
PDCD6-205ENST00000507473 GAPVD1Q14C86 1478 aa12.39□□□□□ -0.43
PDCD6-205ENST00000507473 IFT140Q96RY7 1462 aa12.38□□□□□ -0.43
PDCD6-205ENST00000507473 AQRO60306 1485 aaKnown RBP eCLIP12.34□□□□□ -0.431e-6■■■■□ 25.2
PDCD6-205ENST00000507473 ZNF608Q9ULD9 1512 aaPredicted RBP12.33□□□□□ -0.44
PDCD6-205ENST00000507473 CUL7Q14999 1698 aa12.32□□□□□ -0.44
PDCD6-205ENST00000507473 CLIP1P30622 1438 aa12.32□□□□□ -0.44
PDCD6-205ENST00000507473 GRIN2BQ13224 1484 aa12.28□□□□□ -0.44
PDCD6-205ENST00000507473 PBRM1Q86U86 1689 aa12.28□□□□□ -0.44
PDCD6-205ENST00000507473 FHAD1B1AJZ9 1412 aa12.26□□□□□ -0.45
PDCD6-205ENST00000507473 RANGAP1P46060 587 aaPredicted RBP12.25□□□□□ -0.45
PDCD6-205ENST00000507473 EIF4G3O43432 1585 aaKnown RBP12.24□□□□□ -0.45
PDCD6-205ENST00000507473 ADAMTS12P58397 1594 aa12.23□□□□□ -0.45
PDCD6-205ENST00000507473 ARAP1Q96P48 1450 aa12.23□□□□□ -0.45
PDCD6-205ENST00000507473 ARHGAP35Q9NRY4 1499 aa12.22□□□□□ -0.45
PDCD6-205ENST00000507473 VPS8Q8N3P4 1428 aa12.21□□□□□ -0.45
PDCD6-205ENST00000507473 SNAPC4Q5SXM2 1469 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms